BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,196,294	T→A	I224I (ATA→ATT)	U712_11005 ←	3‑dehydroquinate synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,196,294	0	T	A	100.0%	372.4 / NA	117	I224I (ATA→ATT)	U712_11005	3‑dehydroquinate synthase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (60/57); total (60/57)

Only 100 of 118 total aligned reads displayed.

GCTACGGCATCACCGTGAGTGATCTGTCCGTATCCATATTCAGCCTCAACGGCATGGCCGAGCGTATGTCCGAAGTTTAAGTAAGCTCTGATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGATGCTTTTATTGAAATCCCTTTAAAAATCATGTCATTCAGCTGATCACTGGTGATATCACGCAGTGAGCGGATATTCAGCAGCTCTTCCAGAAACGCTCTGTCATAGATAAAAGCGTGTTTAATCACTTCTGCCATTCCGG  >  CP006881/2196163‑2196427

gCTACGGCATCACCGTGAGTGATCTGCCCATATCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGaaa                                                                                                                                >  2:63634/1‑139 (MQ=255)

gCTACGGCATCACCGTGAGTGATCTGCCCATATCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGaaa                                                                                                                                >  7:228746/1‑139 (MQ=255)

     ggCATCACCGTGAGTGATCTGCCCATATCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCt                                                                                                                           >  7:376562/1‑139 (MQ=255)

          cACCGTGAGTGATCTGCCCATATCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGCACGACAGCCGCTTTAATTTATATGCCTTTaa                                                                                                                       >  8:143734/1‑138 (MQ=255)

               tgagtgaTCTGCCCATATCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAAtaa                                                                                                                 >  5:365551/1‑137 (MQ=255)

                     aTCTGCCCATATCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCa                                                                                                            <  8:413273/138‑1 (MQ=255)

                     aTCTGCCCATATCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCAt                                                                                                           >  7:78506/1‑139 (MQ=255)

                          cccatATCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAg                                                                                                       <  3:93122/134‑1 (MQ=255)

                          cccatATCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGc                                                                                                      >  1:282568/5‑139 (MQ=255)

                           ccatATCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCt                                                                                                     <  4:411308/136‑1 (MQ=255)

                           ccatATCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACAACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCt                                                                                                     <  6:34387/136‑1 (MQ=255)

                               aTCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCGCCTCTTCTTTTTCATCCTGCTGAACGACAGCCGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGAt                                                                                                  >  2:155432/1‑138 (MQ=255)

                               aTCCATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGAt                                                                                                  >  6:398947/1‑138 (MQ=255)

                                  cATATTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCat                                                                                               <  4:413560/138‑2 (MQ=255)

                                    tatTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCattag                                                                                            >  3:238662/1‑135 (MQ=255)

                                    tatTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCattag                                                                                            <  3:226689/139‑5 (MQ=255)

                                    tatTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCattag                                                                                            <  1:147245/139‑5 (MQ=255)

                                    tatTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCAAGTCATTCAGCTGATCattag                                                                                            >  7:102934/1‑135 (MQ=255)

                                    tatTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCATTTAAAAATCATGTCATTCAGCTGATCattag                                                                                            >  2:136297/1‑135 (MQ=255)

                                    tatTCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCAACTCTTCTTTTTCATCCTGCTGAACGACAGACGATTTAATTGAAATGCATTTAAAAATCATTTCATTCAGCTGATCattag                                                                                            >  6:30939/1‑135 (MQ=255)

                                      ttCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTg                                                                                          <  3:85729/139‑1 (MQ=255)

                                      ttCCGCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTg                                                                                          <  5:173907/139‑1 (MQ=255)

                                         cgCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGata                                                                                       >  3:107397/2‑139 (MQ=255)

                                         cgCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGata                                                                                       >  5:167524/2‑139 (MQ=255)

                                          gCCTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGata                                                                                       >  7:398478/1‑138 (MQ=255)

                                           ccTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGatat                                                                                      >  7:169803/1‑138 (MQ=255)

                                           ccTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGatat                                                                                      >  7:280091/1‑138 (MQ=255)

                                           ccTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGatat                                                                                      >  1:342056/1‑138 (MQ=255)

                                            cTCAACGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCa                                                                                    <  8:56049/139‑1 (MQ=255)

                                               aaCGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACg                                                                                  >  4:277398/1‑138 (MQ=255)

                                               aaCGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAAAGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATTTCATTAAGCTGATCATTAGTGATATCACg                                                                                  <  7:160367/138‑1 (MQ=255)

                                                aCGGGATGGCCGAGCGTATGCCCAAAGTTTTACTAAGCTCTTATCCCCTGTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCa                                                                                <  5:113433/139‑1 (MQ=255)

                                                aCGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCa                                                                                <  4:238662/139‑1 (MQ=255)

                                                aCGGCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCa                                                                                <  2:143465/139‑1 (MQ=255)

                                                   gCATGGCCGAGCGTATGCCCTAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTg                                                                             <  6:317546/139‑1 (MQ=255)

                                                   gCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGatat                                                                                      <  6:422708/130‑1 (MQ=255)

                                                   gCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGatat                                                                                      >  5:422708/1‑130 (MQ=255)

                                                   gCATGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTg                                                                             <  4:228328/139‑1 (MQ=255)

                                                      tGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAgt                                                                          <  5:398947/139‑2 (MQ=255)

                                                      tGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAgt                                                                          <  2:301485/139‑2 (MQ=255)

                                                      tGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAgt                                                                          >  3:222563/1‑138 (MQ=255)

                                                      tGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAgt                                                                          <  2:342056/139‑2 (MQ=255)

                                                      tGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAgt                                                                          <  1:265732/139‑2 (MQ=255)

                                                      tGGCCGAGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCATTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAgt                                                                          >  8:159267/1‑138 (MQ=255)

                                                            aGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACCGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCCGCTGATCATTAGTGATATCACGCAGTGAGTGGatat                                                                    >  8:260560/1‑139 (MQ=255)

                                                            aGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCa                                                                                                            <  3:314682/99‑1 (MQ=255)

                                                            aGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCa                                                                                                            >  4:314682/1‑99 (MQ=255)

                                                            aGCGTATGCCCAAAGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGatat                                                                    >  1:359369/1‑139 (MQ=255)

                                                                       aaaGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGctcc                                                         <  5:165591/138‑2 (MQ=255)

                                                                       aaaGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGctcc                                                         >  3:45036/2‑138 (MQ=255)

                                                                       aaaGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGctcc                                                         <  4:222563/138‑2 (MQ=255)

                                                                       aaaGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGctcc                                                         <  4:71540/138‑2 (MQ=255)

                                                                       aaaGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGctcc                                                         >  2:403960/2‑138 (MQ=255)

                                                                        aaGTTTAAGTAAGCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGctcct                                                        >  6:381863/1‑137 (MQ=255)

                                                                             taagtaagCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGaa                                                                                                                                 <  8:416781/61‑1 (MQ=255)

                                                                              aagtaagCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAg                                                                                                       <  8:192450/86‑1 (MQ=255)

                                                                               agtaagCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGaaa                                                 <  6:364601/139‑1 (MQ=255)

                                                                               agtaagCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGaaa                                                 <  6:167524/139‑1 (MQ=255)

                                                                               agtaagCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGaa                                                  <  1:63634/138‑1 (MQ=255)

                                                                                   atctctTATTCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGct                                             <  5:255989/137‑1 (MQ=255)

                                                                                   agatctTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGATTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGct                                             <  8:373918/136‑1 (MQ=255)

                                                                                   agCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAAtg                                                                                                                              <  3:193949/58‑2 (MQ=255)

                                                                                   agCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGct                                             <  2:282568/139‑1 (MQ=255)

                                                                                   agCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGct                                             <  8:376562/139‑1 (MQ=255)

                                                                                   agCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGct                                             <  8:398478/139‑1 (MQ=255)

                                                                                   agCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGct                                             <  1:418706/139‑1 (MQ=255)

                                                                                   agCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGct                                             <  1:314302/139‑1 (MQ=255)

                                                                                   agCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGct                                             <  8:102934/139‑1 (MQ=255)

                                                                                   agCTCTTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGATCCTCCAGAAACGct                                             <  8:7070/139‑1 (MQ=255)

                                                                                     ctctTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATTTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGctct                                           >  5:534/1‑139 (MQ=255)

                                                                                     ctctTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAgt                                                                          >  6:40807/1‑107 (MQ=255)

                                                                                     ctctTATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAgt                                                                          <  5:40807/108‑2 (MQ=255)

                                                                                          aTCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCt                                                                                                     <  3:146396/76‑1 (MQ=255)

                                                                                          aTCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCt                                                                                                     >  4:146396/1‑76 (MQ=255)

                                                                                          aTCCCCTCTTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTc                                        <  8:169803/137‑1 (MQ=255)

                                                                                               ctctTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACg                                                                                  <  1:131044/90‑1 (MQ=255)

                                                                                               ctctTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACg                                                                                  >  2:131044/1‑90 (MQ=255)

                                                                                               ctctTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGct                                             <  1:252197/127‑1 (MQ=255)

                                                                                               ctctTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGct                                             >  2:252197/1‑127 (MQ=255)

                                                                                               ctctTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGAt                                  >  3:393557/1‑138 (MQ=255)

                                                                                               ctctTCTTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGAt                                  >  1:288696/1‑138 (MQ=255)

                                                                                                tcttctTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCagcagc                                                            >  2:88574/1‑111 (MQ=255)

                                                                                                tcttctTTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGATa                                 >  2:336023/1‑138 (MQ=255)

                                                                                                  tgcttTTTCATCCTGCTGAACGACAGCAGCATTAAAGGAAATGCCTTTAAAAATCATGTAATTCATATGATCATTAGTGATATCACGCAGTTAGTGGAGATTACGCAGCTCCTCCAGAAACACACTGTCATAGATaaat                              >  6:341583/3‑138 (MQ=255)

                                                                                                    cttTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGATAAAAg                             <  8:420745/138‑1 (MQ=255)

                                                                                                    cttTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGATAAAAg                             <  2:288696/138‑1 (MQ=255)

                                                                                                    cttTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGATAAAAg                             <  8:280091/138‑1 (MQ=255)

                                                                                                    cttTTTCATCCTGCTGAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGATAAAAGc                            >  4:214255/1‑139 (MQ=255)

                                                                                                              ctgctgAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGATAAAAGCGTGTTTAAt                   <  6:150431/138‑1 (MQ=255)

                                                                                                              ctgctgAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGATAAAAGCGTGTTTAAt                   <  6:93915/138‑1 (MQ=255)

                                                                                                               tgctgAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACg                                                                                  <  7:290247/74‑1 (MQ=255)

                                                                                                               tgctgAACGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACg                                                                                  >  8:290247/1‑74 (MQ=255)

                                                                                                                    aaCGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGATAAAAGCGTGTTTAATCACTTCt            >  6:224052/1‑139 (MQ=255)

                                                                                                                      cGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTg                                                                                          >  4:88259/1‑59 (MQ=255)

                                                                                                                      cGACAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTg                                                                                          <  3:88259/59‑1 (MQ=255)

                                                                                                                         cAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGATAAAAGCGTGTTTAATCACTTCTGccct       >  7:113747/1‑137 (MQ=255)

                                                                                                                         cAGACGCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGATAAAAGCGTGTTTAATCACTTCTGCCAt       >  4:19987/1‑139 (MQ=255)

                                                                                                                           gacgCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGct                                             >  4:214001/4‑99 (MQ=255)

                                                                                                                              gatttaATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGATAAAAGCGTGTTTAATCACTTCTGCCATTCCgg  >  1:302177/3‑139 (MQ=255)

                                                                                                                              gCTTTAATTGAAATGCCTTTAAAAATCATGTCATTCAGCTGATCATTAGTGATATCACGCAGTGAGTGGATATTCAGCAGCTCCTCCAGAAACGCTCTGTCATAGATAAAAGCGTGTTTAATCACTTCTGCCATTCCg   >  3:385308/1‑138 (MQ=255)

GCTACGGCATCACCGTGAGTGATCTGTCCGTATCCATATTCAGCCTCAACGGCATGGCCGAGCGTATGTCCGAAGTTTAAGTAAGCTCTGATCCCCTCTTCTTTTTCATCCTGCTGAACGACAGATGCTTTTATTGAAATCCCTTTAAAAATCATGTCATTCAGCTGATCACTGGTGATATCACGCAGTGAGCGGATATTCAGCAGCTCTTCCAGAAACGCTCTGTCATAGATAAAAGCGTGTTTAATCACTTCTGCCATTCCGG  >  CP006881/2196163‑2196427

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`