Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,196,570	A→G	L132L (CTT→CTC)	U712_11005 ←	3‑dehydroquinate synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,196,570	0	A	G	100.0%	323.6 / NA	97	L132L (CTT→CTC)	U712_11005	3‑dehydroquinate synthase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (44/53);  total (44/53)

GCTCTTTTTCAGGCAAAGAACGCAGGAAGTCTGTATCGTAGAGCACGGCCTTCGGCTGATAAAATGCACCGATTAGATTTTTTCCGAGCGGATGGTTCACGGCTACCTTTCCTCCGACTGCACTGTCATGCGCCAAAAGCGTCGTAGGCATTTGGATAAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCTCCTACAACACCGCCACCGAACGCGATGATGCATGAGGAGCGATCCATATGAAAACGAATCGCTTCA  >  CP006881/2196434‑2196705                                                                                                                                         |                                                                                                                                        gCTCTTTTTCAGGCAGAGAACGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAagag                                                                                                                                       <  4:359839/139‑1 (MQ=255) gCTCTTTTTCAGGCAGAGAACGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAagag                                                                                                                                       <  4:393557/139‑1 (MQ=255)     tttttCAGGCAGAGAACGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGcgtc                                                                                                                                   >  1:217526/1‑139 (MQ=255)       tttCAGGCAGAGAACGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGcgtcg                                                                                                                                  >  3:163043/1‑138 (MQ=255)       tttCAGGCAGAGAACGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGcgtcg                                                                                                                                  >  1:323644/1‑138 (MQ=255)        ttCAGGCAGAGAACGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGcgtcgt                                                                                                                                 <  2:342685/138‑1 (MQ=255)        ttCAGGAAGAGAACGCAGGATATATGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCGAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGcgtcgt                                                                                                                                 <  1:164147/138‑1 (MQ=255)           aGGCAGAGAACGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAgg                                                                                                                              <  2:323644/138‑1 (MQ=255)           aGGCAGAGAACGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAgg                                                                                                                              <  4:163043/138‑1 (MQ=255)              cagaGAACGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGTTTTTATCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCAtt                                                                                                                          <  1:407719/136‑1 (MQ=255)              cagaGAACGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCAtt                                                                                                                          <  2:359369/136‑1 (MQ=255)                   aaCGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGAt                                                                                                                     <  8:167644/139‑1 (MQ=255)                   aaCGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGAt                                                                                                                     <  7:29133/139‑1 (MQ=255)                   aaCGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGAt                                                                                                                     <  4:1627/139‑1 (MQ=255)                   aaCGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGAt                                                                                                                     <  5:154597/139‑1 (MQ=255)                   aaCGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGAt                                                                                                                     <  2:252287/139‑1 (MQ=255)                   aaCGCAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGAGAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGAt                                                                                                                     <  5:353560/139‑1 (MQ=255)                       cAGGAAATCTGTATCATAGATCACGGCTTTCGGCTGATAAAACGCACCGAATAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATgaaa                                                                                                                 >  4:220272/1‑139 (MQ=255)                       cAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATgaaa                                                                                                                 >  8:440742/1‑139 (MQ=255)                       cAGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATgaaa                                                                                                                 >  2:242351/1‑139 (MQ=255)                        aGGAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAAt                                                                                                                <  3:324714/139‑1 (MQ=255)                          gAAATCTGTATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCa                                                                                                              <  1:368039/139‑1 (MQ=255)                                  tATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCcgcg                                                                                                      >  7:249312/1‑139 (MQ=255)                                  tATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCcgcg                                                                                                      >  2:426510/1‑139 (MQ=255)                                  tATCATAGAGCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGATACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCcg                                                                                                        <  8:432426/137‑1 (MQ=255)                                         gagCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATaa                                                                                                 >  1:438202/1‑137 (MQ=255)                                          agCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAg                                                                                              >  7:273519/1‑139 (MQ=255)                                          agCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAg                                                                                              >  8:62294/1‑139 (MQ=255)                                          agCACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAg                                                                                              >  2:253793/1‑139 (MQ=255)                                            cACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAATCGGATGCTTCACGGCTACTTATCCTCCGCCTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCTTTTGGATGAAATCAATGACGAGCATAAAAGTg                                                                                            >  7:202528/1‑139 (MQ=255)                                            cACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTg                                                                                            >  6:135540/1‑139 (MQ=255)                                            cACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTg                                                                                            >  8:165713/1‑139 (MQ=255)                                            cACGGCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTg                                                                                            >  2:21817/1‑139 (MQ=255)                                              cGGCTTTAGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTgg                                                                                           >  8:102816/1‑138 (MQ=255)                                               ggCTTTCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTA‑CTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAg                                                                                        >  8:216079/1‑139 (MQ=255)                                                    tCGGCTGATAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCca                                                                                     >  4:214099/1‑138 (MQ=255)                                                    tCGGCTGATAAAACGCACCGATTAGATTTTTTCAAAGCGGATGGTTCACGGATACTTTTCCTCCGACTGCGCTGTCATGCGCAAAGAGCGTCGTATGCATTTGGATGAAATCAATGCCGAGCATAAAAGTGGAAGCca                                                                                     >  8:214957/1‑138 (MQ=255)                                                           ataataCGCACAGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTTCTTTTCCTCCGAGTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGATATCAATGCCGCGCTTAAAAGTGGCAGCCACaaaag                                                                               <  8:202528/137‑2 (MQ=255)                                                           aTAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATg                                                                                                           <  6:158118/109‑1 (MQ=255)                                                           aTAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATg                                                                                                           >  5:158118/1‑109 (MQ=255)                                                           aTAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCg                                                                             >  3:141528/1‑139 (MQ=255)                                                           aTAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCg                                                                             >  5:126798/1‑139 (MQ=255)                                                           aTAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCg                                                                             >  8:25835/1‑139 (MQ=255)                                                           aTAAAACGCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCg                                                                             >  7:133392/1‑139 (MQ=255)                                                               aacgCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCaa                                                                         <  7:260560/136‑1 (MQ=255)                                                                acgCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGc                                                                           >  7:28805/3‑136 (MQ=255)                                                                 ctcACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGTCTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGa                                                                       <  6:422185/137‑1 (MQ=255)                                                                 cgCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCTCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGa                                                                       <  4:184973/138‑1 (MQ=255)                                                                 cgCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGa                                                                       <  7:21880/138‑1 (MQ=255)                                                                 cgCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGa                                                                       <  8:121296/138‑1 (MQ=255)                                                                 cgCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGa                                                                       <  1:426510/138‑1 (MQ=255)                                                                 cgCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGa                                                                       <  6:370104/138‑1 (MQ=255)                                                                 cgCACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGGAGGCATTTGGATGAAATCAAAGGCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGa                                                                       <  6:219837/138‑1 (MQ=255)                                                                 cgCAACGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGa                                                                       <  7:214957/138‑1 (MQ=255)                                                                   cACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGAtc                                                                     <  7:102816/139‑1 (MQ=255)                                                                   cACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGAtc                                                                     <  1:242351/139‑1 (MQ=255)                                                                   cACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGAtc                                                                     <  7:354896/139‑1 (MQ=255)                                                                   cACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGAtc                                                                     <  8:408987/139‑1 (MQ=255)                                                                   cACCGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGAtc                                                                     <  8:54104/139‑1 (MQ=255)                                                                   cACCGATTAGATTATTTCCAAGCGGATGGTTAACGGCTACTTTTCCTCCGACTGAGCTGTCATGCGCCAAGAGAGTAGTATGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACAGGCAAGAtc                                                                     <  2:235481/139‑1 (MQ=255)                                                                     ccGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAACACCGGCAAGAtccc                                                                   >  5:37708/1‑137 (MQ=255)                                                                     ccGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGAtccc                                                                   >  2:113891/1‑137 (MQ=255)                                                                     ccGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCGCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCTTTTGGATGAAATCAATGCCGCGCTTAAAAGTGGCAGCCACAACACCGGCAAGAtccc                                                                   >  8:269711/1‑137 (MQ=255)                                                                      cGATTAGATTTTTTCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATcccc                                                                  <  7:143734/139‑1 (MQ=255)                                                                           aGATTTTTTCCAAGCGGATGGTTCACGGCTA‑CTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTacaa                                                             <  7:216079/138‑1 (MQ=255)                                                                              ttttttCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAacac                                                          >  6:77674/1‑139 (MQ=255)                                                                                  ttCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCAtt                                                                                                                          <  2:427298/71‑1 (MQ=255)                                                                                  ttCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCAtt                                                                                                                          >  1:427298/1‑71 (MQ=255)                                                                                  ttCCAAGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGcc                                                      >  7:142508/1‑139 (MQ=255)                                                                                    ccaaGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTCCCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCa                                                     <  2:438202/135‑1 (MQ=255)                                                                                       aGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGa                                                                       >  3:433942/1‑117 (MQ=255)                                                                                       aGCGGATGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGa                                                                       <  4:433942/117‑1 (MQ=255)                                                                                            aTGGTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAAtgcg                                            <  5:399022/139‑1 (MQ=255)                                                                                              ggTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCga                                           <  1:380891/138‑1 (MQ=255)                                                                                              ggTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCga                                           <  5:385921/138‑1 (MQ=255)                                                                                               gTTCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCgat                                          <  7:408753/138‑1 (MQ=255)                                                                                                ttCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCgatga                                        <  8:379374/139‑1 (MQ=255)                                                                                                ttCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCgatga                                        <  7:127623/139‑1 (MQ=255)                                                                                                ttCACGGCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCgatga                                        <  1:289843/139‑1 (MQ=255)                                                                                                      gCTACTTTTCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATg                                  <  3:214099/139‑1 (MQ=255)                                                                                                          cttttCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGa                                                                       >  6:115497/3‑98 (MQ=255)                                                                                                          cttttCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGa                                                                       <  5:115497/96‑1 (MQ=255)                                                                                                          cttttCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTCCACCACCGCCCCCGAAGGCGATGATGCATgag                                >  7:175879/3‑137 (MQ=255)                                                                                                          cttttCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATgag                                >  4:89521/3‑137 (MQ=255)                                                                                                          cttttCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATgag                                >  2:280845/3‑137 (MQ=255)                                                                                                          cttttCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATgag                                >  7:209444/3‑137 (MQ=255)                                                                                                           ttttCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATgaggag                             <  1:280845/138‑1 (MQ=255)                                                                                                             ttCCTCCGACTGCGCTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATgaggag                             <  7:62294/137‑1 (MQ=255)                                                                                                                        gcgcTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATGAGGAGCGATCCATATGa                 >  7:21420/4‑138 (MQ=255)                                                                                                                         cgcTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGcc                                                                                                         >  8:122948/3‑49 (MQ=255)                                                                                                                         cgcTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGcc                                                                                                         <  7:122948/47‑1 (MQ=255)                                                                                                                         cgcTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCCCCGAATGCGATGATGCATGAGGAGCGATCCATATGaa                >  1:61160/3‑138 (MQ=255)                                                                                                                         cgcTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATGAGGAGCGATCCATATGaa                >  6:375359/3‑138 (MQ=255)                                                                                                                         cgcTGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCCCCACCGAATGCGATGATGCATGAGGAGCGATCCATATGaa                >  6:96951/3‑138 (MQ=255)                                                                                                                            tGTCATGCGCCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATGAGGAGCGATCCATATGAAAACg            <  8:249312/139‑1 (MQ=255)                                                                                                                                   cgcCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATGAGGAGCGATCCATATGAAAACGAATCGCt     >  8:177498/1‑139 (MQ=255)                                                                                                                                    gcCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATGAGGAGCGATCCATATGAAAACGAATCGCtt    <  7:165713/139‑1 (MQ=255)                                                                                                                                    gcCAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGGGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATGAGGAGCGATCCATATGAAAACGAATCGCtt    <  1:253793/139‑1 (MQ=255)                                                                                                                                      cAAGAGCGTCGTAGGCATTTGGATGAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCCCCTACAACACCGCCACCGAATGCGATGATGCATGAGGAGCGATCCATATGAAAACGAATCGCTTCa  <  8:28805/139‑1 (MQ=255)                                                                                                                                         |                                                                                                                                        GCTCTTTTTCAGGCAAAGAACGCAGGAAGTCTGTATCGTAGAGCACGGCCTTCGGCTGATAAAATGCACCGATTAGATTTTTTCCGAGCGGATGGTTCACGGCTACCTTTCCTCCGACTGCACTGTCATGCGCCAAAAGCGTCGTAGGCATTTGGATAAAATCAATGCCGCGCATAAAAGTGGCAGCCACAAAACCGGCAAGATCTCCTACAACACCGCCACCGAACGCGATGATGCATGAGGAGCGATCCATATGAAAACGAATCGCTTCA  >  CP006881/2196434‑2196705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑