Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,196,960	T→C	K2K (AAA→AAG)	U712_11005 ←	3‑dehydroquinate synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,196,960	0	T	C	100.0%	248.4 / NA	77	K2K (AAA→AAG)	U712_11005	3‑dehydroquinate synthase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (47/30);  total (47/30)

CAACCTCTTCATCCGTGACAAGCATAATCCGTGTTAAAGGCCTGTTTAGAGAGTTTAATAGTTCGCAAACCTCTTTTCTGATGCCTTGTCCGATAAAAACAGGATACGACGAGGAAGCGGTTTGAACATGCAGTGTTTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCGATTTGATCTAAGCCGAATTGTTCAACGACTGCGTTCGCAATCTCCCATGCGACAGCCGCTTCAGCTACTACACTT  >  CP006881/2196824‑2197094                                                                                                                                         |                                                                                                                                       ccacatctTCATCCGTGACAAACATAATCCTTGTTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATCCAGTGtctt                                                                                                                                      >  4:16210/6‑139 (MQ=255)          cATCCGTGACAAACATAATCCTTGTTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAAt                                                                                                                             >  7:424264/1‑139 (MQ=255)          cATCCGTGACAAACATAATCCTTGTTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGCATATTACGAGGAAGCAGTTTGCACATGCAGTGTCTTCATTAAAAt                                                                                                                             >  1:1517/1‑139 (MQ=255)                 gACAAACATAATCCTTGTTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTc                                                                                                                       >  7:18319/1‑138 (MQ=255)                  aCAAACATAATCCTTGTTAAAGGCCTCTTTAAAGAGGTTAATAGTTCGAAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGAAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGa                                                                                                                     >  7:119463/1‑139 (MQ=255)                   cAAACATAATCCTTGTTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGGCTTCATTAAAATTCCCTCGa                                                                                                                     <  6:56828/138‑1 (MQ=255)                     aacATAATCCTTGTTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAg                                                                                                                  <  2:401595/137‑1 (MQ=255)                     aacATAATCCTTGTTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAg                                                                                                                  >  8:32791/3‑139 (MQ=255)                       cATAATCCTTGTTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGtt                                                                                                                <  2:377173/139‑1 (MQ=255)                       cATAATCCTTGTTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGtt                                                                                                                <  1:435076/139‑1 (MQ=255)                            tCCTTGTTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTtctc                                                                                                           <  3:176787/139‑1 (MQ=255)                                tgtTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGa                                                                                                                     <  7:66748/125‑1 (MQ=255)                                tgtTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGa                                                                                                                     >  8:66748/1‑125 (MQ=255)                                tgtTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCatat                                                                                                       >  4:375975/1‑139 (MQ=255)                                 gtTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCatat                                                                                                       >  3:256387/1‑138 (MQ=255)                                 gtTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCatat                                                                                                       >  4:118271/1‑138 (MQ=255)                                 gtTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCatat                                                                                                       >  3:85840/1‑138 (MQ=255)                                 gtTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATAtt                                                                                                      >  4:130671/1‑139 (MQ=255)                                 gtTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATAtt                                                                                                      >  1:386925/1‑139 (MQ=255)                                 gtTAAAGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGAAACCTTGTCCGAAAACAACAGGATATGACGAGGAAGCAGATTGAACATGCAGTGTCTTCATAAAAATTCCCTCGACAGTTTTCTCATAtt                                                                                                      >  2:340057/1‑139 (MQ=255)                                     aacgCCTGTTTAAAGAGGATAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAACACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATtctc                                                                                                   <  5:97688/135‑1 (MQ=255)                                     aaGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATtctc                                                                                                   <  8:18319/138‑1 (MQ=255)                                      aGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCca                                                                                                 >  2:373438/1‑139 (MQ=255)                                      aGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCca                                                                                                 >  4:224727/1‑139 (MQ=255)                                      aGGCCTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCca                                                                                                 >  1:39212/1‑139 (MQ=255)                                         ccTGTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACAt                                                                                              <  4:85840/139‑1 (MQ=255)                                            gTTTAAAGAGGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACAttt                                                                                            >  7:395324/1‑138 (MQ=255)                                                  agagGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGtt                                                                                                                >  5:169836/1‑112 (MQ=255)                                                  agagGTTAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGtt                                                                                                                <  6:169836/112‑1 (MQ=255)                                                      gttAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCg                                                                                 >  4:339548/2‑139 (MQ=255)                                                       ttAATAGTTCGCAAGCGTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAGGCAGTTTGAACATGCAGTGTCTTCTTTAAAATTCCATCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCgg                                                                                >  1:116297/1‑139 (MQ=255)                                                       ttAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACAt                                                                                              >  3:223469/1‑125 (MQ=255)                                                       ttAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACAt                                                                                              <  4:223469/125‑1 (MQ=255)                                                       ttAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCgg                                                                                >  3:315015/1‑139 (MQ=255)                                                       ttAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCgg                                                                                >  6:416263/1‑139 (MQ=255)                                                       ttAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCgg                                                                                >  1:247110/1‑139 (MQ=255)                                                       ttAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCgg                                                                                >  5:292195/1‑139 (MQ=255)                                                       ttAATAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCgg                                                                                >  5:150290/1‑139 (MQ=255)                                                         aaTAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGt                                                                               >  1:36509/1‑138 (MQ=255)                                                         aaTAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGt                                                                               <  3:16210/138‑1 (MQ=255)                                                         aaTAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGt                                                                               >  5:33885/1‑138 (MQ=255)                                                         aaTAGTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGt                                                                               <  2:36509/138‑1 (MQ=255)                                                             gTTCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAAt                                                                           <  7:32791/138‑1 (MQ=255)                                                              ttCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACAtt                                                                                             <  2:206149/119‑1 (MQ=255)                                                              ttCGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACAtt                                                                                             >  1:206149/1‑119 (MQ=255)                                                                cGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAAt                                                                           >  3:56607/1‑135 (MQ=255)                                                                cGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAAt                                                                           <  4:56607/135‑1 (MQ=255)                                                                cGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGa                                                                       >  3:213793/1‑139 (MQ=255)                                                                cGCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGa                                                                       >  7:404363/1‑139 (MQ=255)                                                                 gCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGAt                                                                      <  1:259210/139‑1 (MQ=255)                                                                 gCAAGCCTTTTTTCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGAt                                                                      <  7:310970/139‑1 (MQ=255)                                                                          ttttCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCg                                                              <  4:256387/138‑1 (MQ=255)                                                                            ttCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGaa                                                            <  3:118271/138‑1 (MQ=255)                                                                            ttCTGATACCTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGaa                                                            <  5:416263/138‑1 (MQ=255)                                                                                 ataccTTGTCCGATAAAAACAGGATATGAGGAGGAAGCAGTTTGAACATGCTGTGTCTTCATAAAAATTCCCTCGACATTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGTTCTATTCCGAATTg                                                         <  2:329722/133‑1 (MQ=255)                                                                                 ataccTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGtt                                                       >  7:429613/4‑138 (MQ=255)                                                                                 ataccTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGtt                                                       >  4:155135/4‑138 (MQ=255)                                                                                 ataccTTGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGtt                                                       >  4:150614/4‑138 (MQ=255)                                                                                       tGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTg                                                         >  5:40671/1‑130 (MQ=255)                                                                                       tGTCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTg                                                         <  6:40671/130‑1 (MQ=255)                                                                                        gTCCTATAAAAACAGTATATGACGAGGAAGCTGTTTGAACATGCAGTGTCTTCATTAAAATTCACTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTATTCCGATTTGTTCAACGAc                                                <  1:142642/138‑1 (MQ=255)                                                                                         tCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGAt                                                                      >  6:446897/1‑115 (MQ=255)                                                                                         tCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGAt                                                                      <  5:446897/115‑1 (MQ=255)                                                                                         tCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGTTCAACGACTg                                              >  2:160536/1‑139 (MQ=255)                                                                                         tCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGTTCAACGACTg                                              >  1:88981/1‑139 (MQ=255)                                                                                         tCCGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGTTCAACGACTg                                              >  2:233827/1‑139 (MQ=255)                                                                                           cGATAAAAACAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGTTCAACGACTGCg                                            >  8:273677/1‑139 (MQ=255)                                                                                                aaaaCAGGATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGTTCAACGACTGCGTTCGc                                       <  8:429613/139‑1 (MQ=255)                                                                                                       gATATGACGAGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGTTCAACGACTGCGTTCGCAATTTcc                                >  2:35253/1‑139 (MQ=255)                                                                                                            gacgaGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACAt                                                                                              >  6:341207/1‑72 (MQ=255)                                                                                                            gacgaGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACAt                                                                                              <  5:341207/72‑1 (MQ=255)                                                                                                               gaGGAAGCAGTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGTTCAACGACTGCGTTCGCAATTTCCCAAGCGa                         >  5:224281/1‑138 (MQ=255)                                                                                                                        gTTTGAACATGCAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGTTCAACGACTGCGTTCGCAATTTCCCAAGCGACAGCCGCTTc               <  8:14756/139‑1 (MQ=255)                                                                                                                         tttGATCATGCTGTGTCTTAATTAAAATTCCCTGGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGGCAATTTGATATAATGCTATTTTTTCACCGACTGCGTTCGCAATTTCCCATGCGACAGCAGCTTc               <  8:119463/138‑1 (MQ=255)                                                                                                                                   cAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGTTCAACGACTGCGTTCGCAATTTCCCAAGCGACAGCCGCTTCAGCGACTccac    >  2:126382/1‑139 (MQ=255)                                                                                                                                   cAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGTTCAACGACTGCGTTCGCAATTTCCCAAGCGACAGCCGCTTCAGCGACTacac    >  6:169225/1‑139 (MQ=255)                                                                                                                                   cAGTGTCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCAATTTGATCTAATCCGAATTGTTCAACGACTGCGTTCGCAATTTCCCAAGCGACAGCCGCTTCAGCGACTacac    >  7:403107/1‑139 (MQ=255)                                                                                                                                     gtgtCTTCATTAAAATTCCCTCGACAGTTTTCTCATATTATCCACATTTTCTCTAATGCGGTCAATTTGATCTAAACCTAATGTTCCAACGACTGCGTTCGCAATTTCCCACGCGACAGCCGCTTCAGCGACTACACtt  <  6:33885/139‑1 (MQ=255)                                                                                                                                         |                                                                                                                                       CAACCTCTTCATCCGTGACAAGCATAATCCGTGTTAAAGGCCTGTTTAGAGAGTTTAATAGTTCGCAAACCTCTTTTCTGATGCCTTGTCCGATAAAAACAGGATACGACGAGGAAGCGGTTTGAACATGCAGTGTTTTCATTAAAATTCCCTCGACAGTTTTCTCATATTCTCCACATTTTCTCTAATGCGGTCGATTTGATCTAAGCCGAATTGTTCAACGACTGCGTTCGCAATCTCCCATGCGACAGCCGCTTCAGCTACTACACTT  >  CP006881/2196824‑2197094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑