Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,198,818	G→A	A55A (GCC→GCT)	U712_11015 ←	Chemotaxis protein methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,198,818	0	G	A	100.0%	229.4 / NA	74	A55A (GCC→GCT)	U712_11015	Chemotaxis protein methyltransferase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (35/39);  total (35/39)

ATATCTTTAAAGGCTTACCGTTCTTGATTAACGGCAGAATAGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGGGCTTGATCCTTTTCTAATGCCGCCGCAAAGTCCTTAAAGCTTTGAAACCCCTTTTTCTCATAAAGCGACGTCAGCCTTCTCTTCATTTGTGCTTCTTTATATAATGTCAAATCGACTCCGGTTAATTGTTT  >  CP006881/2198691‑2198949                                                                                                                                |                                                                                                                                    aaatttttAAAGGCCTAGAGGTCTTGATTAACGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCtt                                                                                                                          >  4:361333/6‑139 (MQ=255)                 agaggtCTTGATTAACGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCcgcagc                                                                                                           >  4:267594/6‑138 (MQ=255)                   aggtCTTGATTAACGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCaaa                                                                                                        <  3:292628/136‑1 (MQ=255)                   aggtCTTGATTAACGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCaaa                                                                                                        <  8:209/136‑1 (MQ=255)                       cTTGATTAACGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTcc                                                                                                    >  8:137147/1‑139 (MQ=255)                       cTTGATTAACGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTcc                                                                                                    >  3:111038/1‑139 (MQ=255)                        ttGATTAACGGCAGAATTGCAGTCTCTAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGATACATTGATCGTCATTCTGTCCAATGTTTCATTTTAGAGAGCTTGATCATTTTCAAATGACGAAGCAAAGTCCt                                                                                                   >  7:321512/1‑139 (MQ=255)                        ttGATTAACGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCt                                                                                                   >  8:243793/1‑139 (MQ=255)                        ttGATTAACGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCt                                                                                                   >  4:124526/1‑139 (MQ=255)                        ttGATTAACGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCt                                                                                                   >  2:130246/1‑139 (MQ=255)                        ttGATTAACGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCt                                                                                                   >  1:62255/1‑139 (MQ=255)                               aCGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCt                                                                                            >  7:220933/1‑139 (MQ=255)                               aCGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCt                                                                                            >  3:435642/1‑139 (MQ=255)                                cGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATgccg                                                                                                               <  6:343846/119‑1 (MQ=255)                                cGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATgccg                                                                                                               >  5:343846/1‑119 (MQ=255)                                cGGCAGAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCtt                                                                                           >  2:121077/1‑139 (MQ=255)                                     gAATTGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCATGAACGCTTTGgaa                                                                                      >  4:255860/1‑139 (MQ=255)                                            aGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCttt                                                                               <  3:128305/139‑1 (MQ=255)                                                tcAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTtct                                                                           >  8:92376/1‑139 (MQ=255)                                                tcAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTtc                                                                            >  6:100566/1‑138 (MQ=255)                                                tcAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTtc                                                                            >  4:347115/1‑138 (MQ=255)                                                  aaGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCa                                                                         >  6:208442/1‑139 (MQ=255)                                                   aGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCa                                                                         >  4:114875/1‑138 (MQ=255)                                                      aCTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATaaa                                                                     <  3:267594/139‑1 (MQ=255)                                                        ttCCCATCTTATATAATTACGATAAAATTCTGAAACATAGATCGTCATTCTGTCCAATGTAACATTTAAAAGAGATTGATCCTTATCCAATGCCGCAGCAAAGTCCTTAAAGCTTTCGAACCCCATTTTCTCTTAAAgt                                                                   >  4:163253/1‑138 (MQ=255)                                                          cccATCTTTTATAATTACTATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAgt                                                                   >  5:18264/1‑136 (MQ=255)                                                          cccATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATg                                                                                                                  >  2:393657/1‑90 (MQ=255)                                                          cccATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATg                                                                                                                  <  1:393657/90‑1 (MQ=255)                                                          cccATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGa                                                                 >  3:198385/1‑139 (MQ=255)                                                          cccATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGa                                                                 >  5:253794/1‑139 (MQ=255)                                                          cccATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGa                                                                 >  6:361734/1‑139 (MQ=255)                                                          cccATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCAAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGa                                                                 >  7:216992/1‑139 (MQ=255)                                                                  ttATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGc                                                          <  6:181863/138‑1 (MQ=255)                                                                    ataATTACGATAAAATTCTGAAACATTGATCGTCATTATGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATCCCGCAGCAAACTCCTAAAAGCTTAGGAACCCCTTTTCCTCATAAAGTGACGTTAGCCt                                                        >  3:325497/1‑138 (MQ=255)                                                                     taATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCtt                                                       <  3:177009/138‑1 (MQ=255)                                                                       aTTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTtctc                                                    <  5:86061/139‑1 (MQ=255)                                                                         tACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTGctct                                                   >  3:84211/1‑138 (MQ=255)                                                                          aCGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCtt                                                  >  8:268225/1‑138 (MQ=255)                                                                          aCGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCtt                                                  >  5:252404/1‑138 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  1:121077/139‑1 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  6:252404/139‑1 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  1:40132/139‑1 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  6:18264/139‑1 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  1:283264/139‑1 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  7:158340/139‑1 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  8:303128/139‑1 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  5:413373/139‑1 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  5:183947/139‑1 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  3:361172/139‑1 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  3:124526/139‑1 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  3:361333/139‑1 (MQ=255)                                                                                 aaTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTtgtg                                          <  4:111038/139‑1 (MQ=255)                                                                                  aTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGc                                         <  3:255860/139‑1 (MQ=255)                                                                                  aTTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGc                                         <  7:268225/139‑1 (MQ=255)                                                                                   ttCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGct                                        <  3:268357/139‑1 (MQ=255)                                                                                        aaaCATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGcttct                                     <  2:62255/137‑1 (MQ=255)                                                                                           cATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTTCTTtata                                <  3:347115/139‑1 (MQ=255)                                                                                           cATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTTCTTtata                                <  5:361734/139‑1 (MQ=255)                                                                                           cATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTTCTTtata                                <  3:206269/139‑1 (MQ=255)                                                                                           cATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTTCTTtata                                <  8:220933/139‑1 (MQ=255)                                                                                           cATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTTCTTtata                                <  7:243793/139‑1 (MQ=255)                                                                                           cATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTTCTTtata                                <  3:85657/139‑1 (MQ=255)                                                                                           agacagtCGTCATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTTCTTtata                                <  3:291044/133‑1 (MQ=255)                                                                                                     cATTCTGTCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTACTTtata                                >  7:230997/1‑129 (MQ=255)                                                                                                     cATTCTGTCAAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTTCTTtata                                <  8:230997/129‑1 (MQ=255)                                                                                                            tCCAATGTTTCATTTAAGAGATCTTGATCCTTTTCCAATTACGCAGCAAAGTCCTTAAAGCTTTGGAACCCCGTTTTCTAATAAATTGACGTTATACTTCTCTTCATTTGTGCTTCTTTAAATAGTGTTAAATCGACTc               >  8:334208/1‑139 (MQ=255)                                                                                                            tCCAATGTTTCATTTAAGAGAGCTTGATCTTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAATGTGACGTTTGCCTTCTCTTCATTTGTGCTTCTTTATATAGTGTTAAATCGACt                <  5:100566/138‑1 (MQ=255)                                                                                                            tCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCt                                                                                            <  3:116312/62‑1 (MQ=255)                                                                                                            tCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCt                                                                                            >  4:116312/1‑62 (MQ=255)                                                                                                            tCCAATGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTGGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTTCTTTATATAGTGTTAAATCGACt                <  7:137147/138‑1 (MQ=255)                                                                                                                 tGTTTCATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTTCTTTATATAGTGTTAATTCGACTCCGGt           >  1:31665/1‑138 (MQ=255)                                                                                                                      cATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTTCTTtata                                >  1:84693/1‑112 (MQ=255)                                                                                                                      cATTTAAGAGAGCTTGATCCTTTTCCAATGCCGCAGCAAAGTCCTTAAAGCTTTGGAACCCCTTTTTCTCATAAAGTGACGTTAGCCTTCTCTTCATTTGTGCTTCTTtata                                <  2:84693/112‑1 (MQ=255)                                                                                                                          aaaGAGAGCTTCATCCTTTTCCAATGCCCCCGCAAAGCATTTAAAGCTTTGGACCCCCTTTTGATCATAATGGCAGGTTCGCGTGCTCTTATTTTGGGCTTCTTTATATGGTGTTAAATCGACTCCGGTTAATTGttt  <  4:230292/137‑1 (MQ=255)                                                                                                                                |                                                                                                                                    ATATCTTTAAAGGCTTACCGTTCTTGATTAACGGCAGAATAGCAGTCTCAAGAACTTCCCATCTTTTATAATTACGATAAAATTCTGAAACATTGATCGTCATTCTGTCCAATGTTTCATTTAAGAGGGCTTGATCCTTTTCTAATGCCGCCGCAAAGTCCTTAAAGCTTTGAAACCCCTTTTTCTCATAAAGCGACGTCAGCCTTCTCTTCATTTGTGCTTCTTTATATAATGTCAAATCGACTCCGGTTAATTGTTT  >  CP006881/2198691‑2198949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑