| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,199,465 | C→T | G68G (GGG→GGA) | U712_11020 ← | Nucleoside diphosphate kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,199,465 | 0 | C | T | 98.9% | 269.0 / NA | 92 | G68G (GGG→GGA) | U712_11020 | Nucleoside diphosphate kinase |
| Reads supporting (aligned to +/- strand): ref base C (0/1); major base T (42/48); minor base G (0/1); total (42/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GATGTTTTTCCCGACAAACATGCCATAATCTCCCCGAATCGTACCAGGCAAAGCTTCTTTAGGATTTGTCTTTCCGATCAGCTGTCTCGTTACTTCAATGACATTTTCGCCTTCCCAAACCATTGCGAATACAGGCCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTCCCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCACCAGCTAATTGTAAGCCCTTACGTTCAAATC > CP006881/2199330‑2199598 | gatgTTTTTTACGACAAACATGCCATAATCCCCACGAATCGTACCAGGTAAAGCTTGTTTATGGTTTGTTTTACCGATAAGCTGTCTCGTCACTTAAATGACATTTTAGCCTTCCCACACCAATTCGAATACAGGtccg > 2:358279/1‑138 (MQ=255) atgTTTTTTCCGACAAACATGCCATAATCCCCACGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTg < 3:22780/139‑1 (MQ=255) atgTTTTTTCCGACAAACATGCCATAATCCCCACGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTg < 7:296598/139‑1 (MQ=255) atgTTTTTTCCGACAAACATGCCATAATCCCCACGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTg < 1:275977/139‑1 (MQ=255) atgTTTTTTCCGACAAACATGCCATAATCCCCACGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTg < 2:227777/139‑1 (MQ=255) atgTTTTTTCCGACAAACATGCCATAATCCACACGAATAGTAAGAGGTAAAGCTTCTTTAGGGTTTGTTTTCCAGATCAGCTGTCTCGTCACTTCAATGACACTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTg < 5:240219/139‑1 (MQ=255) tttccGACAAACATGCCATAATCCCCACGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGtaa > 7:414223/4‑139 (MQ=255) ttccGACAAACATGCCATAATCCCCACGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGtaa < 7:187359/136‑1 (MQ=255) ccGACAAACATGCCATAATCCCCACGAATCGTACCAGGTAAAGCTTCTTTAGGGGTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGtaata < 8:338785/138‑1 (MQ=255) ccGACAAACATGCCATAATCCCCACGAATCGTACCAGGTAAAGCTTCTTTAGGGGTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGtaata < 5:30265/138‑1 (MQ=255) tGCCATAATCCCCACGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAg < 1:154026/139‑1 (MQ=255) aaTCCCCACGAATCGTACCAGGTATAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTATCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAAGCAGCTCTcc > 3:144607/1‑139 (MQ=255) tccccacGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTAGCCTTCCCACCCCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCg > 7:121719/7‑138 (MQ=255) ccacGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCgaaga < 2:432045/136‑1 (MQ=255) ccacGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCgaaga < 8:15567/136‑1 (MQ=255) ccacGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCgaag > 2:204207/4‑138 (MQ=255) cacGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCgaaga > 5:416061/3‑138 (MQ=255) acGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCgaaga > 6:438823/2‑137 (MQ=255) acGAATCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCgaaga > 2:263568/2‑137 (MQ=255) aaTCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGc < 1:358279/139‑1 (MQ=255) aaTCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGc < 1:204207/139‑1 (MQ=255) aaTCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGc < 5:429033/139‑1 (MQ=255) aaTCGTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGc < 3:95479/139‑1 (MQ=255) gTACCAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTATCTACACTTCAAAGACATTTTCGCCTTCACACACCATTTCGAATACAGGTCCTGAAGTAATAAACTCAACTAGCTCTCCGAAGAAAggaatg > 4:162168/1‑134 (MQ=255) ccAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCtt < 5:438823/139‑1 (MQ=255) gaGGCAAAGCTTCTTTAGGATTTGTCTTTCCGATCAGCTGTCTCGTTACTTCAATGACATTTTCGCCTTCCCAAACCATTGCGAATACAGGCCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTCCCTTg < 6:90352/138‑1 (MQ=255) cAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTg < 7:222037/139‑1 (MQ=255) ggtaaaGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGAt > 6:442968/4‑139 (MQ=255) ggtaaaGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGAt > 2:199846/4‑139 (MQ=255) ggtaaaGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGAt < 6:438848/136‑1 (MQ=255) gtaaaGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATg > 5:246718/3‑139 (MQ=255) aaGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGtt < 5:315782/138‑1 (MQ=255) aGCTTCTTTAGGGTTGGGTTTCCCGATCAGCTGTCTCGTCACTTCAATGACTTTTTCGCCGTCCCACACCAGTGCGATTACAGGTCCTGCAGTAATAAACTCAACGAGCTCGCCGAACAAAGGCTACCCATGATGTTCg > 6:69464/1‑139 (MQ=255) cttTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCCACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCg > 8:314760/1‑137 (MQ=255) cttTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCtctc > 3:166430/1‑108 (MQ=255) cttTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCtctc < 4:166430/108‑1 (MQ=255) cttTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCg > 7:255614/1‑137 (MQ=255) cttTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCg > 1:371999/1‑137 (MQ=255) cttTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCg > 4:340455/1‑137 (MQ=255) tttAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGc < 1:36338/118‑1 (MQ=255) tttAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGc > 2:36338/1‑118 (MQ=255) ttAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAgt > 4:386836/1‑139 (MQ=255) tAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAgt < 1:199846/138‑1 (MQ=255) tAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAg < 2:371999/137‑1 (MQ=255) tAGGGTTTGTGTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAg < 6:55957/137‑1 (MQ=255) ggtttGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGttt > 4:161163/3‑139 (MQ=255) tttGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTtct < 3:340455/139‑1 (MQ=255) tGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTtct > 4:437343/1‑137 (MQ=255) tGTTTTCCCGATCAGCTGTCTCGTCACTACAAAGACATTATCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTATCTCa > 3:422198/1‑139 (MQ=255) gttttcccGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCa < 3:261639/132‑1 (MQ=255) tcccGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCa < 2:49015/136‑1 (MQ=255) cccGATCAGCTGTCTCGTCACTTCAATGACATTTTAGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTGTCTCAGCCAt < 6:66473/137‑1 (MQ=255) aTCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGtt > 7:115253/1‑139 (MQ=255) aTCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGtt < 8:55595/139‑1 (MQ=255) tCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTc < 7:318809/139‑1 (MQ=255) tctcGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCa < 6:416061/137‑1 (MQ=255) tctcGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCAct < 1:148916/139‑1 (MQ=255) tctcGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCAca < 7:422174/139‑2 (MQ=255) gctcGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCa < 8:260742/136‑1 (MQ=255) aCTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTg > 8:294336/1‑122 (MQ=255) aCTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGGCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTg < 7:294336/122‑1 (MQ=255) tCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACt > 5:210855/1‑139 (MQ=255) tGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGc > 6:154500/1‑139 (MQ=255) tGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGc > 8:361923/1‑139 (MQ=255) aCATTTTCGCCTTCCCACAGCTTTGCGAATACAGGTCCTGTAGTAATAAACTGAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTggag < 7:179198/138‑3 (MQ=255) aCATTTTCGCATTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGcg < 6:246718/138‑2 (MQ=255) ttttCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAg > 5:15326/1‑139 (MQ=255) ttttCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAg > 5:211322/1‑139 (MQ=255) tCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATACACTCAACGAGCTCTCCGATGAAATGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCt < 5:69464/138‑1 (MQ=255) tCGCCTTCCCACACCAATGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGACGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCt < 8:415192/138‑1 (MQ=255) cccACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGt < 8:115253/137‑1 (MQ=255) ccATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCtt < 3:207494/139‑1 (MQ=255) ccATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCt > 3:309015/1‑138 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGCGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCAGTTGGTCAGTCACTCTCATTAACTTGGCGCCAGCGAATTGTAAGcccgtccg > 6:41489/1‑134 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTTGGTTTTGTAAGGCATTTGTTGCTTCCCTCCACTTAAATTTGCGCCAGGTTAATGTTAGCCCTTACg > 2:266652/1‑139 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGc > 1:179081/1‑85 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGc < 2:179081/85‑1 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACg > 3:310387/1‑139 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACg > 6:434139/1‑139 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACg > 6:353739/1‑139 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCa < 7:187049/98‑1 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCa > 8:187049/1‑98 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCt < 3:170711/134‑1 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCt > 4:170711/1‑134 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGt > 7:149490/1‑139 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTCGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGt > 1:138536/1‑139 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCAGTTGTTCAGTCGCTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGt > 5:265665/1‑139 (MQ=255) cGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGtt < 5:154500/138‑1 (MQ=255) aCAGGTCCTGAAGTAATAAACTCAACGCGCTCTCCGAAGAAAGGCTTACCTTGATGGTCGGCGTAGTGGTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATc < 2:270047/139‑1 (MQ=255) aCAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGc > 7:442028/1‑77 (MQ=255) aCAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGc < 8:442028/77‑1 (MQ=255) cAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATc < 1:266652/138‑1 (MQ=255) cAGGTCCTGAAGTAATAAACTCAACGAGCGCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATc < 8:26240/138‑1 (MQ=255) | GATGTTTTTCCCGACAAACATGCCATAATCTCCCCGAATCGTACCAGGCAAAGCTTCTTTAGGATTTGTCTTTCCGATCAGCTGTCTCGTTACTTCAATGACATTTTCGCCTTCCCAAACCATTGCGAATACAGGCCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTCCCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCACCAGCTAATTGTAAGCCCTTACGTTCAAATC > CP006881/2199330‑2199598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |