| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,199,507 | C→A | G54G (GGG→GGT) | U712_11020 ← | Nucleoside diphosphate kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,199,507 | 0 | C | A | 97.9% | 287.8 / ‑4.1 | 94 | G54G (GGG→GGT) | U712_11020 | Nucleoside diphosphate kinase |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base A (47/45); total (48/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCAGGCAAAGCTTCTTTAGGATTTGTCTTTCCGATCAGCTGTCTCGTTACTTCAATGACATTTTCGCCTTCCCAAACCATTGCGAATACAGGCCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTCCCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCACCAGCTAATTGTAAGCCCTTACGTTCAAATCTGGATAAAATATCCCCAATGAGCTGACGTTGGACACCGTCTGGT > CP006881/2199373‑2199642 | ccAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCtt < 5:438823/139‑1 (MQ=255) gaGGCAAAGCTTCTTTAGGATTTGTCTTTCCGATCAGCTGTCTCGTTACTTCAATGACATTTTCGCCTTCCCAAACCATTGCGAATACAGGCCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTCCCTTg < 6:90352/138‑1 (MQ=255) cAGGTAAAGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTg < 7:222037/139‑1 (MQ=255) ggtaaaGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGAt < 6:438848/136‑1 (MQ=255) ggtaaaGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGAt > 2:199846/4‑139 (MQ=255) ggtaaaGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGAt > 6:442968/4‑139 (MQ=255) gtaaaGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATg > 5:246718/3‑139 (MQ=255) aaGCTTCTTTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGtt < 5:315782/138‑1 (MQ=255) aGCTTCTTTAGGGTTGGGTTTCCCGATCAGCTGTCTCGTCACTTCAATGACTTTTTCGCCGTCCCACACCAGTGCGATTACAGGTCCTGCAGTAATAAACTCAACGAGCTCGCCGAACAAAGGCTACCCATGATGTTCg > 6:69464/1‑139 (MQ=255) cttTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCCACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCg > 8:314760/1‑137 (MQ=255) cttTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCg > 7:255614/1‑137 (MQ=255) cttTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCg > 1:371999/1‑137 (MQ=255) cttTAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCg > 4:340455/1‑137 (MQ=255) ttAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAgt > 4:386836/1‑139 (MQ=255) tAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAgt < 1:199846/138‑1 (MQ=255) tAGGGTTTGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAg < 2:371999/137‑1 (MQ=255) tAGGGTTTGTGTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAg < 6:55957/137‑1 (MQ=255) ggtttGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGttt > 4:161163/3‑139 (MQ=255) tttGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTtct < 3:340455/139‑1 (MQ=255) tGTTTTCCCGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTtct > 4:437343/1‑137 (MQ=255) tGTTTTCCCGATCAGCTGTCTCGTCACTACAAAGACATTATCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTATCTCa > 3:422198/1‑139 (MQ=255) gttttcccGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCa < 3:261639/132‑1 (MQ=255) tcccGATCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCa < 2:49015/136‑1 (MQ=255) cccGATCAGCTGTCTCGTCACTTCAATGACATTTTAGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTGTCTCAGCCAt < 6:66473/137‑1 (MQ=255) aTCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGtt > 7:115253/1‑139 (MQ=255) aTCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGtt < 8:55595/139‑1 (MQ=255) tCAGCTGTCTCGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTc < 7:318809/139‑1 (MQ=255) tctcGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCa < 6:416061/137‑1 (MQ=255) tctcGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCAct < 1:148916/139‑1 (MQ=255) tctcGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCAca < 7:422174/139‑2 (MQ=255) gctcGTCACTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCa < 8:260742/136‑1 (MQ=255) aCTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTg > 8:294336/1‑122 (MQ=255) aCTTCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGGCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTg < 7:294336/122‑1 (MQ=255) tCAATGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACt > 5:210855/1‑139 (MQ=255) tGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGc > 6:154500/1‑139 (MQ=255) tGACATTTTCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGc > 8:361923/1‑139 (MQ=255) aCATTTTCGCCTTCCCACAGCTTTGCGAATACAGGTCCTGTAGTAATAAACTGAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTggag < 7:179198/138‑3 (MQ=255) aCATTTTCGCATTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGcg < 6:246718/138‑2 (MQ=255) ttttCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAg > 5:15326/1‑139 (MQ=255) ttttCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAg > 5:211322/1‑139 (MQ=255) tCGCCTTCCCACACCATTGCGAATACAGGTCCTGAAGTAATACACTCAACGAGCTCTCCGATGAAATGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCt < 5:69464/138‑1 (MQ=255) tCGCCTTCCCACACCAATGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGACGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCt < 8:415192/138‑1 (MQ=255) cccACACCATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGt < 8:115253/137‑1 (MQ=255) ccATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCtt < 3:207494/139‑1 (MQ=255) ccATTGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCt > 3:309015/1‑138 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGCGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCAGTTGGTCAGTCACTCTCATTAACTTGGCGCCAGCGAATTGTAAGcccgtccg > 6:41489/1‑134 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTTGGTTTTGTAAGGCATTTGTTGCTTCCCTCCACTTAAATTTGCGCCAGGTTAATGTTAGCCCTTACg > 2:266652/1‑139 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGc < 2:179081/85‑1 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGc > 1:179081/1‑85 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACg > 6:434139/1‑139 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACg > 3:310387/1‑139 (MQ=255) ttGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACg > 6:353739/1‑139 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCa > 8:187049/1‑98 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCa < 7:187049/98‑1 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCt < 3:170711/134‑1 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCt > 4:170711/1‑134 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGt > 7:149490/1‑139 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTCGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGt > 1:138536/1‑139 (MQ=255) tGCGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCAGTTGTTCAGTCGCTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGt > 5:265665/1‑139 (MQ=255) cGAATACAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGtt < 5:154500/138‑1 (MQ=255) aCAGGTCCTGAAGTAATAAACTCAACGCGCTCTCCGAAGAAAGGCTTACCTTGATGGTCGGCGTAGTGGTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATc < 2:270047/139‑1 (MQ=255) aCAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGc < 8:442028/77‑1 (MQ=255) aCAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGc > 7:442028/1‑77 (MQ=255) cAGGTCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATc < 1:266652/138‑1 (MQ=255) cAGGTCCTGAAGTAATAAACTCAACGAGCGCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATc < 8:26240/138‑1 (MQ=255) gtccTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATc > 2:15720/3‑135 (MQ=255) gtccTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATc > 4:156489/3‑135 (MQ=255) cTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCAt > 5:22778/1‑73 (MQ=255) cTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCAt < 6:22778/73‑1 (MQ=255) cTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCa < 8:413711/84‑1 (MQ=255) cTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCa > 7:413711/1‑84 (MQ=255) cTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATCTAGATa > 4:240981/1‑138 (MQ=255) gTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATCTAGATAAAatgt < 6:211322/139‑3 (MQ=255) aataaACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCt < 5:228340/100‑1 (MQ=255) aataaACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCt > 6:228340/1‑100 (MQ=255) ataaACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCAct < 1:144221/78‑1 (MQ=255) ataaACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCAct > 2:144221/1‑78 (MQ=255) taaACTCAACGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTAACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATCTAGATAAAatttaca > 3:11486/1‑133 (MQ=255) aaCGATCTATCAGAAGAAAGTCTTACCTTGATGTTCGGAGTAGTGTTTCTCAGACATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAATCCCTTACGTTCGAATCTAGATAAAATGTCCCCAATGAGc < 4:11486/139‑1 (MQ=255) aaCGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATCTAGATAAAATGTCCCCAATGAGc > 1:383790/1‑139 (MQ=255) aaCGAGCTCTCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATCTAGATAAAATGTCCCCAATGAGc > 4:391466/1‑139 (MQ=255) aaCGAGCTCTCCGAAGAAAGGCATACATTGATGTTCGGCGTAGTGTTTCTAAGCCATTTTTTAACTCACGCTCATTAACTTGTCGCCAGCAAATTGTAAGGCCTTACGTTCGAAACTAGATAAAATGTGCCCAATGac > 2:432490/1‑137 (MQ=255) cGAGCTCTCCGAAGAATGGCTTACCTTGATGTTCGGCGTAGTTGTTCTCAGCCATTTGTTCATTCACTCTCCTTAACTTGGCGCCAGCTAATTGTAAGCCCTTTCGTTCTAATCTAGATAAAATGGCCCGTATGAGCTg < 8:121719/139‑1 (MQ=255) cGAGCTCTCCGAAGAAAGGCTTAGCTTGATGTTAGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTTTAAGCCCTTACGTTCGAATCTAGATAAAATGTCCCCATTGAGCTg < 6:115992/139‑1 (MQ=255) ctctCCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATCTAGATAAAATGTCCCCAATGAGCTGACGt > 5:357268/1‑139 (MQ=255) ctcCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATCTAGATAAAATGTCCCCAATGAGCTGACGTTg > 4:436547/1‑139 (MQ=255) ctcCGAAGAAAGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCGCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATCTAGATAAAATGTCCCCAATGAGCTGACGTTg > 6:89597/1‑139 (MQ=255) gaagaaAGGCTTACCTTGATGTTCGGCGTAGGGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATCTAGATAAAATGTCCCCAATGAGCTGACGTTGGaca < 8:255614/139‑1 (MQ=255) aaaGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATCTAGATAAAATGTCCCCAATGAGCTGACGTTGGACACCGt < 3:386836/139‑1 (MQ=255) aaaGGCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATCTAGATAAAATGTCCCCAATGAGCTGACGTTGGACACCGt < 1:263568/139‑1 (MQ=255) ggCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGcg < 8:19918/66‑2 (MQ=255) ggCTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGcg > 7:19918/1‑65 (MQ=255) cTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTTACTTGGCGCCAGCTAATTGTAAGCCGTTACGTTCGAATGTAGATAAAATGTCCCCATTGTGCTGTCGTTGGACACCGTCTGGt < 4:422198/139‑1 (MQ=255) cTTACCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCGCCAGCTAATTGTAAGCCCTTACGTTCGAATCTAGATAAAATGTCCCCAATGAGCTGACGTTGGACACCGTCTGGt > 8:285909/1‑139 (MQ=255) | CCAGGCAAAGCTTCTTTAGGATTTGTCTTTCCGATCAGCTGTCTCGTTACTTCAATGACATTTTCGCCTTCCCAAACCATTGCGAATACAGGCCCTGAAGTAATAAACTCAACGAGCTCTCCGAAGAAAGGCTTCCCTTGATGTTCGGCGTAGTGTTTCTCAGCCATTTGTTCAGTCACTCTCATTAACTTGGCACCAGCTAATTGTAAGCCCTTACGTTCAAATCTGGATAAAATATCCCCAATGAGCTGACGTTGGACACCGTCTGGT > CP006881/2199373‑2199642 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |