Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,199,823 C→T A309A (GCG→GCA)  U712_11025 ← Heptaprenyl diphosphate synthase component 2

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,199,8230CT99.0% 319.3 / NA 101A309A (GCG→GCA) U712_11025Heptaprenyl diphosphate synthase component 2
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (57/43);  minor base G (0/1);  total (57/44)
Fisher's exact test for biased strand distribution p-value = 4.36e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 101 total aligned reads displayed.

TTATGTATGTATAGGCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTGCAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCCGCAAGAGACGAACGTGCACGCCCTCTCGGAAGCGTGTTTAATTTCTCGAAAGCTTTCTGCAAATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCCGTTTTTTTGATTTCCTCAATGATTGGTTCAAG  >  CP006881/2199688‑2199957
                                                                                                                                       |                                                                                                                                      
ttATGTATGTATAGGCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGc                                                                                                                                      >  6:229563/1‑138 (MQ=255)
 tatgtatgTATAGGCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTATAATTTTCTTTTACCGATATATTTTGCGATGGCTGCa                                                                                                                                     <  4:326611/138‑1 (MQ=255)
     tatgtatAGGCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAgaga                                                                                                                                >  8:88713/1‑139 (MQ=255)
         tataGGCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGag                                                                                                                            >  4:27747/1‑138 (MQ=255)
           taGGCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCg                                                                                                                          >  8:112196/1‑139 (MQ=255)
             ggCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTg                                                                                                                        >  7:420406/1‑139 (MQ=255)
             ggCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTg                                                                                                                        >  7:332500/1‑139 (MQ=255)
             ggCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTg                                                                                                                        >  2:128690/1‑139 (MQ=255)
             ggCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATAAATCAGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACATATATATTTTGCGATGGCTGCAAGAGACGagagtg                                                                                                                        >  8:415435/1‑134 (MQ=255)
              gCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGc                                                                                                                       >  3:47136/1‑139 (MQ=255)
              gCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCAGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGc                                                                                                                       >  1:416092/1‑139 (MQ=255)
               cgttCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGcg                                                                                                                      <  4:28664/137‑2 (MQ=255)
                  tCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGcgc                                                                                                                     <  8:50137/137‑3 (MQ=255)
                  tCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAAAATCTACAAAAATTAAAATTATCTTATACCGATATATTTTGCGATGTCTGCAAGAGACGAGCGTgcgcgc                                                                                                                   >  6:283901/1‑139 (MQ=255)
                   cacaCTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTgcgcgc                                                                                                                   <  5:37462/138‑1 (MQ=255)
                   cacaCTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTgcgcgc                                                                                                                   >  6:37462/1‑138 (MQ=255)
                   cacaCTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGcc                                                                                                                  >  1:142140/1‑139 (MQ=255)
                   cacaCTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGcc                                                                                                                  >  5:206541/1‑139 (MQ=255)
                    acacTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGccc                                                                                                                 <  5:262003/139‑1 (MQ=255)
                      acTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCctc                                                                                                               >  2:94437/1‑139 (MQ=255)
                        tGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGTCTGCAAGAGACGAGCGTTCGCGCCctc                                                                                                               >  7:9571/1‑137 (MQ=255)
                        tGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGTCTGCAAGAGACGAGCGTGCGCGCCctc                                                                                                               >  7:68199/1‑137 (MQ=255)
                        tGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGccc                                                                                                                 >  1:287415/1‑135 (MQ=255)
                        tGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGccc                                                                                                                 <  2:287415/135‑1 (MQ=255)
                        tGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCctc                                                                                                               >  4:17680/1‑137 (MQ=255)
                        tGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCctc                                                                                                               >  4:58815/1‑137 (MQ=255)
                        tGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCctc                                                                                                               >  3:383247/1‑137 (MQ=255)
                        tGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCctc                                                                                                               >  8:406804/1‑137 (MQ=255)
                        tGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCctc                                                                                                               >  1:93619/1‑137 (MQ=255)
                        tGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTAACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCctc                                                                                                               >  4:35764/1‑137 (MQ=255)
                          cacaCCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCctcgag                                                                                                            >  3:408574/1‑135 (MQ=255)
                          cacaCCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCctcgag                                                                                                            >  8:228026/1‑135 (MQ=255)
                          cacaCCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCctcgag                                                                                                            >  5:417066/1‑135 (MQ=255)
                          cacaCCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCctcgag                                                                                                            >  1:305207/1‑135 (MQ=255)
                          cacaCCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTCCGATGGCTGCAAGAGACGAGCGTGCGCGCCctcgagg                                                                                                           >  4:90868/1‑135 (MQ=255)
                                  aaTCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCgtgt                                                                                                   >  7:58228/1‑139 (MQ=255)
                                  aaTCGTAACAACTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCTATCGATGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCctgt                                                                                                   >  2:280051/1‑139 (MQ=255)
                                    tCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGtt                                                                                                  >  7:1630/1‑138 (MQ=255)
                                    tCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGtt                                                                                                  >  6:353381/1‑138 (MQ=255)
                                       tAACATCTTTCTGATAATTAATCAATCCTGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCTATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAAt                                                                                              >  1:430355/1‑139 (MQ=255)
                                       tAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAAt                                                                                              <  3:46997/139‑1 (MQ=255)
                                       tAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAAt                                                                                              <  1:334882/139‑1 (MQ=255)
                                         aCATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGTCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTACAttt                                                                                            >  2:444138/1‑139 (MQ=255)
                                             cTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCa                                                                                                                                     >  5:313181/1‑94 (MQ=255)
                                             cTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCa                                                                                                                                     <  6:313181/94‑1 (MQ=255)
                                             cTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTtctg                                                                                         >  7:127494/1‑137 (MQ=255)
                                               ttCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTtctgaa                                                                                       >  1:157058/1‑135 (MQ=255)
                                                tCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTtctgaa                                                                                       <  6:44107/137‑4 (MQ=255)
                                                tCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTtctgaa                                                                                       >  3:443410/1‑134 (MQ=255)
                                                tCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATAAAAATTTTCTTTTACCGATATATTTTGCTATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTtctgaaaa                                                                                     >  8:226934/1‑134 (MQ=255)
                                                    aTAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCt                                                                                  <  3:27747/138‑1 (MQ=255)
                                                    aTAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCt                                                                                  <  4:443410/138‑1 (MQ=255)
                                                    aTAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCCACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCtt                                                                                 >  4:319148/1‑139 (MQ=255)
                                                           atcaatcCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCag                                                                          <  7:88713/139‑2 (MQ=255)
                                                           atcaatcCGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCag                                                                          <  3:252641/139‑2 (MQ=255)
                                                                tcCGTGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCATTTACAGATATATTATGCCAAGGCTGCAAGAGACGCGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATATCGGAAAAACTTTATGCagctac                                                                      >  6:248767/1‑133 (MQ=255)
                                                                  cGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGTCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACAtt                                                                   <  8:68199/139‑1 (MQ=255)
                                                                     ggCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTtctgaaaa                                                                                     <  2:165174/118‑6 (MQ=255)
                                                                     ggCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTtctgaaaa                                                                                     >  1:165174/1‑113 (MQ=255)
                                                                       cGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCt                                                              <  5:229563/139‑1 (MQ=255)
                                                                       cGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCt                                                              <  5:353381/139‑1 (MQ=255)
                                                                       aggAGTAACTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGTAAAGCTTTCTGCAGATACATTTCGCt                                                              <  5:283901/138‑1 (MQ=255)
                                                                         tataaaTTTCTTAATATGAACAAAAATTTAAATTATCTTTTACCGATATATTTTGAGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAGGCGTGTTTAATTTCTGAATAGCTTTCTGCAGATACATTTCGCTTa                                                            <  4:82311/136‑1 (MQ=255)
                                                                         gagaAATTTCTTAATATCTACATCATTTTAAATTTTCTTTTACCTATATATTTTGGGATGGCTGCAAGAGACTAGCGTTCGCGCCCTCGAGGAAGCGTGTTTTATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTa                                                            <  5:248767/139‑1 (MQ=255)
                                                                         gagaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTa                                                            <  8:58228/139‑1 (MQ=255)
                                                                         gagaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTa                                                            <  8:332500/139‑1 (MQ=255)
                                                                         gagaAATTTCTTAATATCCACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTa                                                            <  3:319148/139‑1 (MQ=255)
                                                                          agaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTAc                                                           >  6:204576/1‑139 (MQ=255)
                                                                          agaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTAc                                                           >  2:412999/1‑139 (MQ=255)
                                                                          agaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTAc                                                           >  7:280949/1‑139 (MQ=255)
                                                                          agaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTAc                                                           >  8:313380/1‑139 (MQ=255)
                                                                          agaAATATCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGCTATATTTTGCGATGGCGGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTAc                                                           <  2:161156/139‑1 (MQ=255)
                                                                           gaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACt                                                          <  2:32953/139‑1 (MQ=255)
                                                                              aTTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGAAGGCTGCAAGAGACGCGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAACAGCTTACTGCAGAAACAGATCGCTAACTGc                                                        >  4:214727/1‑138 (MQ=255)
                                                                                  cTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATa                                                    <  7:228026/138‑1 (MQ=255)
                                                                                   ttAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATCGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGa                                                  <  8:420406/139‑1 (MQ=255)
                                                                                     aaTATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGa                                                  <  6:435104/137‑1 (MQ=255)
                                                                                     aaTATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGa                                                  <  4:156804/137‑1 (MQ=255)
                                                                                     aaTATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGa                                                  <  2:416092/137‑1 (MQ=255)
                                                                                       tatCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCt                                              <  7:313380/139‑1 (MQ=255)
                                                                                                 aattaaaattTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCAt                                    <  3:17680/139‑1 (MQ=255)
                                                                                                   ttaaaattTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATct                                  <  3:35764/139‑2 (MQ=255)
                                                                                                               tatACCGATATATTTTGCGAAGGCTGCAAGAGACGAGCGTGCGCGCCCTCGATGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGAt                       <  7:415435/136‑1 (MQ=255)
                                                                                                                         tatTTTGCGCTGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa            <  1:191715/139‑1 (MQ=255)
                                                                                                                         tatTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa            <  4:408574/139‑1 (MQ=255)
                                                                                                                         tatTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa            <  8:127494/139‑1 (MQ=255)
                                                                                                                           ttttGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGAt           <  4:178416/138‑1 (MQ=255)
                                                                                                                              tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGAt                       <  6:317304/123‑1 (MQ=255)
                                                                                                                              tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGAt                       >  5:317304/1‑123 (MQ=255)
                                                                                                                              tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt       >  1:145080/1‑139 (MQ=255)
                                                                                                                              tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt       >  6:343727/1‑139 (MQ=255)
                                                                                                                              tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt       >  2:11344/1‑139 (MQ=255)
                                                                                                                              tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt       >  4:320700/1‑139 (MQ=255)
                                                                                                                              tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt       >  4:174640/1‑139 (MQ=255)
                                                                                                                              tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt       >  3:24829/1‑139 (MQ=255)
                                                                                                                              tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTCTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt       >  5:343119/1‑139 (MQ=255)
                                                                                                                              tGCGATGGCTGCAAGAGACGAGCGTGCGCGACCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt       >  7:238334/1‑139 (MQ=255)
                                                                                                                                 gATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCa    <  7:229816/139‑1 (MQ=255)
                                                                                                                                   tGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAg  <  8:1630/139‑1 (MQ=255)
                                                                                                                                   tGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAg  <  3:58815/139‑1 (MQ=255)
                                                                                                                                       |                                                                                                                                      
TTATGTATGTATAGGCTTTCACACTGCACACCGAAATCGTAACATCTTTCTGATAATTAATCAATCCGGGGCGGAGAAATTTCTTAATATCTGCAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCCGCAAGAGACGAACGTGCACGCCCTCTCGGAAGCGTGTTTAATTTCTCGAAAGCTTTCTGCAAATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCCGTTTTTTTGATTTCCTCAATGATTGGTTCAAG  >  CP006881/2199688‑2199957

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑