Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,199,885	A→G	L289L (TTG→CTG)	U712_11025 ←	Heptaprenyl diphosphate synthase component 2

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,199,885	0	A	G	100.0%	242.7 / NA	74	L289L (TTG→CTG)	U712_11025	Heptaprenyl diphosphate synthase component 2
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (29/45);  total (29/45)

CGGGGCGGAGAAATTTCTTAATATCTGCAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCCGCAAGAGACGAACGTGCACGCCCTCTCGGAAGCGTGTTTAATTTCTCGAAAGCTTTCTGCAAATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCCGTTTTTTTGATTTCCTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCGCTGTTAATCAATTTAAGCTGATTCTTTAATG  >  CP006881/2199754‑2200007                                                                                                                                    |                                                                                                                           cGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGTCTGCAAGAGACGAGCGTTCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACAtt                                                                                                                     <  8:9571/139‑1 (MQ=255) cGGGGCGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGTCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACAtt                                                                                                                     <  8:68199/139‑1 (MQ=255)      cGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCt                                                                                                                <  5:353381/139‑1 (MQ=255)      cGGAGAAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCt                                                                                                                <  5:229563/139‑1 (MQ=255)      aggAGTAACTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGTAAAGCTTTCTGCAGATACATTTCGCt                                                                                                                <  5:283901/138‑1 (MQ=255)        tataaaTTTCTTAATATGAACAAAAATTTAAATTATCTTTTACCGATATATTTTGAGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAGGCGTGTTTAATTTCTGAATAGCTTTCTGCAGATACATTTCGCTTa                                                                                                              <  4:82311/136‑1 (MQ=255)        gagaAATTTCTTAATATCTACATCATTTTAAATTTTCTTTTACCTATATATTTTGGGATGGCTGCAAGAGACTAGCGTTCGCGCCCTCGAGGAAGCGTGTTTTATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTa                                                                                                              <  5:248767/139‑1 (MQ=255)        gagaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTa                                                                                                              <  8:332500/139‑1 (MQ=255)        gagaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTa                                                                                                              <  8:58228/139‑1 (MQ=255)        gagaAATTTCTTAATATCCACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTa                                                                                                              <  3:319148/139‑1 (MQ=255)         agaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTAc                                                                                                             >  8:313380/1‑139 (MQ=255)         agaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTAc                                                                                                             >  7:280949/1‑139 (MQ=255)         agaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTAc                                                                                                             >  2:412999/1‑139 (MQ=255)         agaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTAc                                                                                                             >  6:204576/1‑139 (MQ=255)         agaAATATCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGCTATATTTTGCGATGGCGGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTAc                                                                                                             <  2:161156/139‑1 (MQ=255)          gaAATTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACt                                                                                                            <  2:32953/139‑1 (MQ=255)             aTTTCTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGAAGGCTGCAAGAGACGCGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAACAGCTTACTGCAGAAACAGATCGCTAACTGc                                                                                                          >  4:214727/1‑138 (MQ=255)                 cTTAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATa                                                                                                      <  7:228026/138‑1 (MQ=255)                  ttAATATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATCGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGa                                                                                                    <  8:420406/139‑1 (MQ=255)                    aaTATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGa                                                                                                    <  4:156804/137‑1 (MQ=255)                    aaTATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGa                                                                                                    <  6:435104/137‑1 (MQ=255)                    aaTATCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGa                                                                                                    <  2:416092/137‑1 (MQ=255)                      tatCTACAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCt                                                                                                <  7:313380/139‑1 (MQ=255)                                aattaaaattTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCAt                                                                                      <  3:17680/139‑1 (MQ=255)                                  ttaaaattTTCTTTTACCGATATATTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATct                                                                                    <  3:35764/139‑2 (MQ=255)                                              tatACCGATATATTTTGCGAAGGCTGCAAGAGACGAGCGTGCGCGCCCTCGATGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGAt                                                                         <  7:415435/136‑1 (MQ=255)                                                        tatTTTGCGCTGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                              <  1:191715/139‑1 (MQ=255)                                                        tatTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                              <  8:127494/139‑1 (MQ=255)                                                        tatTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                              <  4:408574/139‑1 (MQ=255)                                                          ttttGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGAt                                                             <  4:178416/138‑1 (MQ=255)                                                             tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGAt                                                                         <  6:317304/123‑1 (MQ=255)                                                             tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGAt                                                                         >  5:317304/1‑123 (MQ=255)                                                             tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                         >  4:174640/1‑139 (MQ=255)                                                             tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                         >  6:343727/1‑139 (MQ=255)                                                             tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                         >  3:24829/1‑139 (MQ=255)                                                             tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                         >  2:11344/1‑139 (MQ=255)                                                             tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                         >  1:145080/1‑139 (MQ=255)                                                             tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                         >  4:320700/1‑139 (MQ=255)                                                             tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTCTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                         >  5:343119/1‑139 (MQ=255)                                                             tGCGATGGCTGCAAGAGACGAGCGTGCGCGACCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                         >  7:238334/1‑139 (MQ=255)                                                                gATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCa                                                      <  7:229816/139‑1 (MQ=255)                                                                  tGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAg                                                    <  8:1630/139‑1 (MQ=255)                                                                  tGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAg                                                    <  3:58815/139‑1 (MQ=255)                                                                     ctgCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTg                                                 <  2:93619/137‑1 (MQ=255)                                                                             gaCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGACAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCg                                         <  3:320947/139‑1 (MQ=255)                                                                             gaCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCg                                         <  6:206541/139‑1 (MQ=255)                                                                             gaCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCg                                         <  1:94437/139‑1 (MQ=255)                                                                             gaCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCg                                         <  7:112196/139‑1 (MQ=255)                                                                             gaCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCg                                         <  2:356843/139‑1 (MQ=255)                                                                              aCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                              <  4:267750/117‑1 (MQ=255)                                                                              aCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                              >  3:267750/1‑117 (MQ=255)                                                                                gagcGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTa                                                                                                              <  8:144919/64‑1 (MQ=255)                                                                                gagcGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTa                                                                                                              >  7:144919/4‑67 (MQ=255)                                                                                   cGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGtct                                   >  3:170168/1‑139 (MQ=255)                                                                                   cGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGtct                                   <  7:226934/139‑1 (MQ=255)                                                                                       cgcGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACt                               >  1:217854/3‑139 (MQ=255)                                                                                             ctcgaggAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAAt                         >  8:98708/6‑139 (MQ=255)                                                                                             ctcgaggAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAAt                         <  2:217854/134‑1 (MQ=255)                                                                                                      gCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCCTCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAg                >  6:417314/1‑139 (MQ=255)                                                                                                       cGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGc               <  2:430355/139‑1 (MQ=255)                                                                                                       cGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGc               >  4:252744/1‑139 (MQ=255)                                                                                                        gtgtTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATTCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCt              >  2:187836/1‑139 (MQ=255)                                                                                                        gtgtTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCt              >  8:203949/1‑139 (MQ=255)                                                                                                        gtgtTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCt              >  8:375815/1‑139 (MQ=255)                                                                                                           tttAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTATTCAATGATTTGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTggt           >  5:134426/1‑137 (MQ=255)                                                                                                               aTTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTtttt       <  3:174640/139‑1 (MQ=255)                                                                                                               aTTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTtttt       <  3:252744/139‑1 (MQ=255)                                                                                                                tttCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTtttt       >  2:192796/1‑138 (MQ=255)                                                                                                                   ctgaaaaGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                              >  2:213704/5‑80 (MQ=255)                                                                                                                   ctgaaaaGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                              <  1:213704/76‑1 (MQ=255)                                                                                                                   ctgaaaaGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAAt   >  5:439299/5‑139 (MQ=255)                                                                                                                     gaaaaGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATg  >  4:403353/3‑138 (MQ=255)                                                                                                                      aaaaGCTTTCTTCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATg  <  1:280051/136‑1 (MQ=255)                                                                                                                      aaaaGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATg  <  1:412999/136‑1 (MQ=255)                                                                                                                                    |                                                                                                                           CGGGGCGGAGAAATTTCTTAATATCTGCAAAAATTAAAATTTTCTTTTACCGATATATTTTGCGATGGCCGCAAGAGACGAACGTGCACGCCCTCTCGGAAGCGTGTTTAATTTCTCGAAAGCTTTCTGCAAATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCCGTTTTTTTGATTTCCTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCGCTGTTAATCAATTTAAGCTGATTCTTTAATG  >  CP006881/2199754‑2200007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑