Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,199,940	C→T	E270E (GAG→GAA)	U712_11025 ←	Heptaprenyl diphosphate synthase component 2

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,199,940	0	C	T	100.0%	282.6 / NA	90	E270E (GAG→GAA)	U712_11025	Heptaprenyl diphosphate synthase component 2
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (43/47);  total (43/47)

TATTTTGCGATGGCCGCAAGAGACGAACGTGCACGCCCTCTCGGAAGCGTGTTTAATTTCTCGAAAGCTTTCTGCAAATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCCGTTTTTTTGATTTCCTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCGCTGTTAATCAATTTAAGCTGATTCTTTAATGCTGGATTTTCCAGAGCATACAGCACTGGCAATGTGACATTCCCTTGAAGCAAATCTCCTCCAA  >  CP006881/2199809‑2200070                                                                                                                                    |                                                                                                                                   tatTTTGCGCTGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                                                                                             <  1:191715/139‑1 (MQ=255) tatTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                                                                                             <  8:127494/139‑1 (MQ=255) tatTTTGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                                                                                             <  4:408574/139‑1 (MQ=255)   ttttGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGAt                                                                                                                            <  4:178416/138‑1 (MQ=255)      tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                                                                                        >  1:145080/1‑139 (MQ=255)      tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                                                                                        >  3:24829/1‑139 (MQ=255)      tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                                                                                        >  4:174640/1‑139 (MQ=255)      tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                                                                                        >  4:320700/1‑139 (MQ=255)      tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                                                                                        >  2:11344/1‑139 (MQ=255)      tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                                                                                        >  6:343727/1‑139 (MQ=255)      tGCGATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTCTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                                                                                        >  5:343119/1‑139 (MQ=255)      tGCGATGGCTGCAAGAGACGAGCGTGCGCGACCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGt                                                                                                                        >  7:238334/1‑139 (MQ=255)         gATGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCa                                                                                                                     <  7:229816/139‑1 (MQ=255)           tGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAg                                                                                                                   <  8:1630/139‑1 (MQ=255)           tGGCTGCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAg                                                                                                                   <  3:58815/139‑1 (MQ=255)              ctgCAAGAGACGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTg                                                                                                                <  2:93619/137‑1 (MQ=255)                      gaCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGACAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCg                                                                                                        <  3:320947/139‑1 (MQ=255)                      gaCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCg                                                                                                        <  2:356843/139‑1 (MQ=255)                      gaCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCg                                                                                                        <  6:206541/139‑1 (MQ=255)                      gaCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCg                                                                                                        <  7:112196/139‑1 (MQ=255)                      gaCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCg                                                                                                        <  1:94437/139‑1 (MQ=255)                       aCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                                                                                             <  4:267750/117‑1 (MQ=255)                       aCGAGCGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                                                                                             >  3:267750/1‑117 (MQ=255)                            cGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGtct                                                                                                  <  7:226934/139‑1 (MQ=255)                            cGTGCGCGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGtct                                                                                                  >  3:170168/1‑139 (MQ=255)                                cgcGCCCTCGAGGAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACt                                                                                              >  1:217854/3‑139 (MQ=255)                                      ctcgaggAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAAt                                                                                        >  8:98708/6‑139 (MQ=255)                                      ctcgaggAAGCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAAt                                                                                        <  2:217854/134‑1 (MQ=255)                                               gCGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCCTCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAg                                                                               >  6:417314/1‑139 (MQ=255)                                                cGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGc                                                                              >  4:252744/1‑139 (MQ=255)                                                cGTGTTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGc                                                                              <  2:430355/139‑1 (MQ=255)                                                 gtgtTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATTCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCt                                                                             >  2:187836/1‑139 (MQ=255)                                                 gtgtTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCt                                                                             >  8:375815/1‑139 (MQ=255)                                                 gtgtTTAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCt                                                                             >  8:203949/1‑139 (MQ=255)                                                    tttAATTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTATTCAATGATTTGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTggt                                                                          >  5:134426/1‑137 (MQ=255)                                                        aTTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTtttt                                                                      <  3:174640/139‑1 (MQ=255)                                                        aTTTCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTtttt                                                                      <  3:252744/139‑1 (MQ=255)                                                         tttCTGAAAAGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTtttt                                                                      >  2:192796/1‑138 (MQ=255)                                                            ctgaaaaGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                                                                                             <  1:213704/76‑1 (MQ=255)                                                            ctgaaaaGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGa                                                                                                                             >  2:213704/5‑80 (MQ=255)                                                            ctgaaaaGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAAt                                                                  >  5:439299/5‑139 (MQ=255)                                                              gaaaaGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATg                                                                 >  4:403353/3‑138 (MQ=255)                                                               aaaaGCTTTCTTCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATg                                                                 <  1:280051/136‑1 (MQ=255)                                                               aaaaGCTTTCTGCAGATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATg                                                                 <  1:412999/136‑1 (MQ=255)                                                                           cagaTACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGAtttttc                                                      <  6:343119/133‑3 (MQ=255)                                                                           cagaTACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCa                                                     <  5:343727/134‑1 (MQ=255)                                                                           cagaTACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCa                                                     <  1:192796/134‑1 (MQ=255)                                                                           cagaTACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCa                                                     <  7:78519/134‑1 (MQ=255)                                                                              aTACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGtct                                                                                                  >  6:145834/1‑89 (MQ=255)                                                                              aTACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGtct                                                                                                  <  5:145834/89‑1 (MQ=255)                                                                              aTACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCGGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTcc                                                                                                            >  8:306474/1‑79 (MQ=255)                                                                              aTACATTTCGCTTACTGCCATAGATGCGTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTcc                                                                                                            <  7:306474/79‑1 (MQ=255)                                                                                 cATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATa                                              <  2:145080/138‑1 (MQ=255)                                                                                 cATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATa                                              <  2:142140/138‑1 (MQ=255)                                                                                 cATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATa                                              <  4:383247/138‑1 (MQ=255)                                                                                 cATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATAc                                             <  1:128690/139‑1 (MQ=255)                                                                                 cATTTCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGGTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATa                                              <  4:47136/138‑1 (MQ=255)                                                                                   tttCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGGTTTTTCAGGGCATACAg                                           >  2:379948/1‑139 (MQ=255)                                                                                   tttCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAg                                           <  2:157058/139‑1 (MQ=255)                                                                                     tCGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATCATTGGTTCAAGATGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCa                                         >  4:331910/1‑139 (MQ=255)                                                                                      cGCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCa                                         <  8:238334/138‑1 (MQ=255)                                                                                       gCTTACTGCCATAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACt                                       <  6:134426/139‑1 (MQ=255)                                                                                                  tAGATGCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGAc                            >  6:89392/1‑139 (MQ=255)                                                                                                       gCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCagg                                                   <  3:177485/111‑2 (MQ=255)                                                                                                       gCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCagg                                                   >  4:177485/1‑110 (MQ=255)                                                                                                       gCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGtttc                       >  7:297587/1‑137 (MQ=255)                                                                                                       gCTTCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGtttc                       >  5:385388/1‑137 (MQ=255)                                                                                                         ttCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCa                                                     <  1:130572/107‑1 (MQ=255)                                                                                                         ttCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCa                                                     >  2:130572/1‑107 (MQ=255)                                                                                                         ttCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCt                     >  3:246697/1‑139 (MQ=255)                                                                                                         ttCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCt                     >  5:14962/1‑139 (MQ=255)                                                                                                         ttCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCt                     >  5:394626/1‑139 (MQ=255)                                                                                                         ttCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCt                     >  3:288071/1‑139 (MQ=255)                                                                                                         ttCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCt                     >  7:258411/1‑139 (MQ=255)                                                                                                         ttCAATTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCt                     >  7:296682/1‑139 (MQ=255)                                                                                                         ttCAATTGCATCTG‑TTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCtt                    >  7:347879/1‑139 (MQ=255)                                                                                                            aaTTGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCTTg                   <  5:204576/138‑1 (MQ=255)                                                                                                              ttGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCTTGAAg                <  2:305207/139‑1 (MQ=255)                                                                                                              ttGCATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCTTGAAg                <  8:258411/139‑1 (MQ=255)                                                                                                                 cATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATa                                              <  3:286618/106‑1 (MQ=255)                                                                                                                 cATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATa                                              >  4:286618/1‑106 (MQ=255)                                                                                                                 cATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCTTGAAGCa              >  7:26388/1‑138 (MQ=255)                                                                                                                 cATCTGTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGAATACAGCACTGGCAATGTGACGGTTACTTGAAgaa              >  6:423592/1‑136 (MQ=255)                                                                                                                   tctgTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCTTGAAGCAAAt           >  2:4489/4‑139 (MQ=255)                                                                                                                      gTTTTTTTGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCTTGAAGCAAAtc          >  4:133046/1‑137 (MQ=255)                                                                                                                       tttttttGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCTTGAAGCAAAtct         <  3:133046/137‑1 (MQ=255)                                                                                                                       tttttttGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCTTGAAGCAAAtct         <  4:24829/137‑1 (MQ=255)                                                                                                                       tttttttGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCTTGAAGCAAAt           <  3:191945/135‑1 (MQ=255)                                                                                                                             tGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCTTGAAGCAAATCtcctccta  <  7:203949/138‑3 (MQ=255)                                                                                                                             tGATTTCTTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCACTGTTAATCAATTTAAGCTGGTTTTTTAATGCAGGATTTTTCAGGGCATACAGCACTGGCAATGTGACGTTTCCTTGAAGCAAATCtcctccta  <  4:246697/138‑3 (MQ=255)                                                                                                                                    |                                                                                                                                   TATTTTGCGATGGCCGCAAGAGACGAACGTGCACGCCCTCTCGGAAGCGTGTTTAATTTCTCGAAAGCTTTCTGCAAATACATTTCGCTTACTGCCATAGATGCTTCAATTGCATCCGTTTTTTTGATTTCCTCAATGATTGGTTCAAGCTGTTCCTGCGTTGTCTCGCTGTTAATCAATTTAAGCTGATTCTTTAATGCTGGATTTTCCAGAGCATACAGCACTGGCAATGTGACATTCCCTTGAAGCAAATCTCCTCCAA  >  CP006881/2199809‑2200070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑