Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,200,339	T→C	Q137Q (CAA→CAG)	U712_11025 ←	Heptaprenyl diphosphate synthase component 2

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,200,339	0	T	C	100.0%	272.5 / NA	84	Q137Q (CAA→CAG)	U712_11025	Heptaprenyl diphosphate synthase component 2
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (27/57);  total (27/57)

AGCTGACAGCTGACCGCGATCAGGAGCGCCGTTTTTCTTTTGATGCGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCGATTTCCCCAAGACAAACTTCAACAATCGTTTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACATCGCAATGCGATTATCCCACTTTGCTTTGATTGTCGGCTTTCCTCTGCG  >  CP006881/2200208‑2200473                                                                                                                                    |                                                                                                                                       agctggcagctgacCGCGATCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACa                                                                                                                                 <  1:350083/139‑1 (MQ=255) agctggcagctgacCGCGATCAAGAGAGCTGTTTTTCGATTTATACGGCGGAGATACGTTCTGCGATTTTGTTCCATGTTGTATTTGTCTTTGATCAGCTCAATCTCCCCTAGACAAACTTCAACGATCGTCTGTGAc                                                                                                                                  >  4:168865/1‑138 (MQ=255)  gctggcagctgacCGCGATCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACaa                                                                                                                                <  1:166268/139‑1 (MQ=255)  gctggcagctgacCGCGATCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACaa                                                                                                                                <  2:91789/139‑1 (MQ=255)  gctggcagctgacCGCGATCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACaa                                                                                                                                <  7:103148/139‑1 (MQ=255)   ctggcagctgacCGCGATCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACaaa                                                                                                                               <  7:224867/139‑1 (MQ=255)   ctggcagctgacCGCGATCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACaaa                                                                                                                               <  3:319284/139‑1 (MQ=255)   ctggcagctgacCGCGATCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACaaa                                                                                                                               <  2:292785/139‑1 (MQ=255)      gcagctgacCGCGATCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATc                                                                                                                            >  3:349531/2‑139 (MQ=255)      gcagctgacCGCGATCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCAGGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAGAATc                                                                                                                            >  3:441119/2‑139 (MQ=255)      gcagctgacCGCGATCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGAATTTGTTCCATGTTGTATTTGTATTTGATCTGCTCAATTTACCCTAGACAAACTTCAACGATAGTCTTTCACAAAATc                                                                                                                            >  7:201456/2‑139 (MQ=255)      gcagctgacCGCGATCAAGAGAGCTGTTTATCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATc                                                                                                                            >  1:300610/2‑139 (MQ=255)                    tCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCgg                                                                                                              <  1:210909/139‑1 (MQ=255)                    tCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCgg                                                                                                              <  3:416163/139‑1 (MQ=255)                    tCAAGAGAGCTGTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCgg                                                                                                              <  8:383151/139‑1 (MQ=255)                    tCAAGAGAGCAGTGTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCgg                                                                                                              <  8:102773/139‑1 (MQ=255)                             ctgTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAAt                                                                                                     >  5:209198/3‑139 (MQ=255)                             ctgTTTTTCTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAAt                                                                                                     >  2:82126/3‑139 (MQ=255)                                     cTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGtc                                                                                              <  6:152406/138‑1 (MQ=255)                                     cTTTTGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGtc                                                                                              <  1:359150/138‑1 (MQ=255)                                        ttGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGtcat                                                                                            <  4:349641/137‑1 (MQ=255)                                        ttGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGtcat                                                                                            <  4:343538/137‑1 (MQ=255)                                        ttGATACGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGtcat                                                                                            <  8:251564/137‑1 (MQ=255)                                               ggcggAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATATCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCgg                                                                                                              <  1:39333/112‑1 (MQ=255)                                               ggcggAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTAAATATCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCgg                                                                                                              >  2:39333/1‑112 (MQ=255)                                                gcggAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAACCTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTGCGTTAATTCTCGTCATCATTTCAaga                                                                                  <  2:300610/139‑1 (MQ=255)                                                      agaCGTTCTGAGATTGTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATcc                                                                             <  2:346660/136‑1 (MQ=255)                                                         cggtCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGc                                                                          <  4:441119/135‑1 (MQ=255)                                                         cGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGc                                                                          <  8:362880/138‑1 (MQ=255)                                                         cGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGc                                                                          <  2:360886/138‑1 (MQ=255)                                                         cGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGc                                                                          <  8:276424/138‑1 (MQ=255)                                                          gTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCaa                                                                        <  2:81563/139‑1 (MQ=255)                                                           ttCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACa                                                                                                                                 <  8:357090/81‑1 (MQ=255)                                                           ttCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACa                                                                                                                                 >  7:357090/1‑81 (MQ=255)                                                           ttCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTaa                                                                                                      <  4:397233/108‑1 (MQ=255)                                                           ttCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTaa                                                                                                      >  3:397233/1‑108 (MQ=255)                                                             cTGAGATTTTGTTGCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGc                                                                      <  8:201456/138‑1 (MQ=255)                                                             cTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGc                                                                      <  4:227091/138‑1 (MQ=255)                                                              tGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTATCGTCATCATTTCAAGAGATCCCGCAAGCa                                                                     >  1:304025/1‑138 (MQ=255)                                                                   ttttGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAAt                                                               <  1:70147/139‑1 (MQ=255)                                                                   ttttGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAAt                                                               <  5:112963/139‑1 (MQ=255)                                                                   ttttGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAAt                                                               <  5:134715/139‑1 (MQ=255)                                                                   ttttGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAAt                                                               <  5:49811/139‑1 (MQ=255)                                                                   ttttGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGGCTGTGACAAAATCCTATTGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAAt                                                               <  7:284975/139‑1 (MQ=255)                                                                     ttGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCg                                                             >  4:67253/1‑139 (MQ=255)                                                                      tGTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTGCCCATAGACAAACTTCAACGATCGTCTGTGACAATATCCTATGGGATAACCGTTCGATAAATCTCGTCATAATTTCAAGAGATCCCGCAAGCATATCTTCGc                                                            >  4:352050/1‑139 (MQ=255)                                                                       tttCCATGTTGTATTTGTCTTTGAGCTGCTCAATTTCCACTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGc                                                            <  2:304025/137‑1 (MQ=255)                                                                       gTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGc                                                            <  2:391640/138‑1 (MQ=255)                                                                       gTTCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGc                                                            <  2:273686/138‑1 (MQ=255)                                                                        ttCCATGTTGTATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCt                                                          <  3:128546/139‑1 (MQ=255)                                                                             tgttgtATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTgtgt                                                      >  8:207241/1‑138 (MQ=255)                                                                             tgttgtATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTa                                                     >  5:183070/1‑139 (MQ=255)                                                                             tgttgtATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTa                                                     <  3:363247/139‑1 (MQ=255)                                                                             tgttgtATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTa                                                     <  6:209198/139‑1 (MQ=255)                                                                             tgttgtATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTa                                                     <  3:67253/139‑1 (MQ=255)                                                                             tgtggtATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTa                                                     <  6:44818/139‑1 (MQ=255)                                                                               tggtAATTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGCTCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTa                                                     <  8:93125/135‑1 (MQ=255)                                                                                 gtATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACATAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACAt                                                  <  8:322233/138‑1 (MQ=255)                                                                                 gtATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATTGGCTTTCGGTTCGGTTATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACAt                                                  <  1:306076/138‑1 (MQ=255)                                                                                 gtATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACAt                                                  <  1:40681/138‑1 (MQ=255)                                                                                 gtATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACAt                                                  <  8:274640/138‑1 (MQ=255)                                                                                 ggaTTTGTCTTTGATCTCCTCAATTTCCACTAGACAAACTTCAATGATTGTCAGTGACAAAATCCTCTGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGTGATCCCGCAAGCATATAATCGCCTGTGTACAt                                                  <  3:352050/136‑1 (MQ=255)                                                                                  tATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGTGATCCCGCAAGCATATAATCGCCt                                                          <  8:326510/129‑1 (MQ=255)                                                                                  tATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGTGATCCCGCAAGCATATAATCGCCt                                                          >  7:326510/1‑129 (MQ=255)                                                                                  tATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGc                                                                      >  8:317694/1‑117 (MQ=255)                                                                                  tATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGc                                                                      <  7:317694/117‑1 (MQ=255)                                                                                  tATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCTTATAATCGCCt                                                          <  8:277743/129‑1 (MQ=255)                                                                                  tATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCt                                                          >  7:277743/1‑129 (MQ=255)                                                                                  tATTTGTCTTTGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACATCg                                                >  5:7478/1‑139 (MQ=255)                                                                                            tGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCtgtg                                                       <  2:4239/122‑1 (MQ=255)                                                                                            tGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCtgtg                                                       >  1:4239/1‑122 (MQ=255)                                                                                            tGATCTGCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACATCGCAATACGAtt                                      >  4:129219/1‑139 (MQ=255)                                                                                                  gCTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACATCGCAATACGATTGTCCCa                                >  2:370002/1‑139 (MQ=255)                                                                                                   cTCAATTTCCCCTAGACAAACTTCAACGATCGTCTGTGACAAAATCCTATCGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATACCGCAAGCATATAATCGCCTGTGTACATCGCAATACGATTGTCCCa                                >  7:844/1‑138 (MQ=255)                                                                                                                  aCAAACTTCAACGATCGTCTGTGACTAAATCCTTTGGGCTTTCGGTTCGTTTATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACATCGCAATACGATTGTCCCACTTTGCTTTGATTGt                 <  8:844/138‑1 (MQ=255)                                                                                                                      aCTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGc                                                                      >  8:285705/1‑81 (MQ=255)                                                                                                                      aCTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGc                                                                      <  7:285705/81‑1 (MQ=255)                                                                                                                      aCTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCat                                                                    >  5:433526/1‑83 (MQ=255)                                                                                                                      aCTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCat                                                                    <  6:433526/83‑1 (MQ=255)                                                                                                                      aCTTCAACGATCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACATCGCAATACGATTGTCCCACTTTGCTTTGATTGTCggtt            >  4:384415/1‑137 (MQ=255)                                                                                                                           aacgaTCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACATCGCAATACGATTGTCCCACTTTGCTTTGATTGTCGGTTTTCct       >  2:373525/1‑139 (MQ=255)                                                                                                                                tCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACATCGCAATACGATTGTCCCACTTTGCTTTGATTGTCGGTTTTCCTCGGCg  <  7:207241/139‑1 (MQ=255)                                                                                                                                tCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACATCGCAATACGATTGTCCCACTTTGCTTTGATTGTCGGTTTTCCTCGGCg  <  6:7478/139‑1 (MQ=255)                                                                                                                                tCGTCTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGGACATCGCAATACGATTGTCCCACTTTGCTTTGATTGTCGGTTTTCCTCGGCg  <  3:168865/139‑1 (MQ=255)                                                                                                                                    |                                                                                                                                       AGCTGACAGCTGACCGCGATCAGGAGCGCCGTTTTTCTTTTGATGCGGCGGAGATACGTTCTGAGATTTTGTTCCATGTTGTATTTGTCTTTGATCTGCTCGATTTCCCCAAGACAAACTTCAACAATCGTTTGTGACAAAATCCTATGGGCTTTCGGTTCGTTAATTCTCGTCATCATTTCAAGAGATCCCGCAAGCATATAATCGCCTGTGTACATCGCAATGCGATTATCCCACTTTGCTTTGATTGTCGGCTTTCCTCTGCG  >  CP006881/2200208‑2200473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑