| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,271,097 | A→G | G326G (GGT→GGC) | U712_11465 ← | Malate‑2H(+)/Na(+)‑lactate antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,271,097 | 0 | A | G | 97.7% | 234.1 / NA | 87 | G326G (GGT→GGC) | U712_11465 | Malate‑2H(+)/Na(+)‑lactate antiporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (46/37); minor base T (0/2); total (46/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATACATCGCACAGCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCACCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCAATCGCATGG > CP006881/2270962‑2271232 | atacatCGCACAGCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGaccgcc > 8:326876/1‑138 (MQ=255) atCGCACAGCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGCCCGCCAAAAc > 8:286956/1‑139 (MQ=255) atCGCACAGCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCACAAGCAGACCGCCAAAAc > 1:223132/1‑139 (MQ=255) tcccacaGCCGACGATGTTTGCTAAAAACGCAACGATCAGTGTAGACAATGAGACATTGCGGGCTTAAGTTAATTTCTTTTCAAACGTTCAAACAATCAATTTAAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAAcc < 5:47543/136‑1 (MQ=255) cGCACAGCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAAcc > 7:75536/1‑138 (MQ=255) cGCACAGCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAAcc > 1:144109/1‑138 (MQ=255) cGCACAGCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAAcc > 1:167247/1‑138 (MQ=255) cGCACAGCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAAcc > 1:49858/1‑138 (MQ=255) cacaGCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAg > 6:255321/1‑139 (MQ=255) cacaGCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACAATGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAC‑CACGCCGAGTTTCTCAAGCAGACCGACAAAACAAAg > 6:152879/1‑139 (MQ=255) gCCGAAGATTTTTGCTAAAAACGCTAAGATCAGTGTAGACTATTTTACATTGCCGTCTGATGTTAATTTCTTTTCAAACTTTTAAACATTTACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCa < 5:62111/139‑1 (MQ=255) gCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCa < 7:58926/139‑1 (MQ=255) gCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCa < 3:37376/139‑1 (MQ=255) gCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCa < 1:293345/139‑1 (MQ=255) gATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAgat > 3:109546/1‑138 (MQ=255) gTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAgatgat < 8:426717/138‑1 (MQ=255) tttGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGAtgatga > 3:356485/1‑139 (MQ=255) aCGCTACGATCAGTTTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACgagaga < 8:128359/139‑1 (MQ=255) gCTACGCTCCGTGTCGACAATGTGACATTGCCGGCGGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAACCCAAGGCCAAAGATGATGACGACGAGAGAAt < 2:6537/139‑1 (MQ=255) gtgtAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGATTCAAGCATAcc > 4:305167/1‑139 (MQ=255) gtgtAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATAcc > 4:307227/1‑139 (MQ=255) tgtAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACATTGACTTTTAC‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGATTCAAGCATACCg > 6:44599/1‑139 (MQ=255) aCAATGTGACATTGCCGTCTTAATTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGATTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAAt > 8:44419/1‑139 (MQ=255) aCAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAAt > 1:204054/1‑139 (MQ=255) aCAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAAt > 7:367015/1‑139 (MQ=255) aCAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAAt > 3:301147/1‑139 (MQ=255) aTGTTACATTGCCGGCTGAAGTTAATTTCTTTTAAAACGTTGAAACAATGACTTTTAA‑CACGACGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACTAGATAATCAAGCATACAGACAATTc > 8:373070/1‑138 (MQ=255) aTGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTc > 8:241592/1‑138 (MQ=255) aTGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTc > 4:360857/1‑138 (MQ=255) tgtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCAt > 7:72076/1‑126 (MQ=255) tgtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCAt < 8:72076/126‑1 (MQ=255) tgtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCa > 3:159352/1‑139 (MQ=255) tgtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCa > 3:425306/1‑139 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGCCTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGCCGAGAGCATCAAGCATACCGACAATTCCAc > 4:52999/1‑139 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGaccgcc < 6:100797/83‑1 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGaccgcc > 8:361901/1‑83 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGaccgcc < 7:361901/83‑1 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGaccgcc > 5:100797/1‑83 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGTCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCAc > 5:229385/1‑139 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAAcc > 1:107804/1‑89 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAAcc < 4:55507/89‑1 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAAcc > 3:55507/1‑89 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAAcc < 2:107804/89‑1 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCAc > 6:376454/1‑139 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCAc > 3:309617/1‑139 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCAc > 7:386429/1‑139 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCAc > 4:408714/1‑139 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCAc > 4:77636/1‑139 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCAc > 1:126629/1‑139 (MQ=255) gtgACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACAACGAGAGAATCAAGCATACCGACAATTCCAc > 4:284704/1‑139 (MQ=255) gACTTTGCCGGCTTAAGTTAATTTCTTTTCAAACGTTTAAACAATCCATTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCACGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACcg < 2:118677/139‑1 (MQ=255) cATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACACCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACcgcg > 2:146366/1‑139 (MQ=255) cATCGCCGCCTTAATTAAATTTCTTTTCAACCTTTCAAAAAATCATTTTAAC‑CACGACGAGATTCTCAACCAGACCCCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACcgcg < 1:139011/139‑1 (MQ=255) tGCCGGCTGAAGTTTATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCGCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCCAGCATACCGACAATGCCCACGCGGtt > 4:76663/1‑139 (MQ=255) tGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGCCGAGAGAATCAAGCATACCGACAATTCCACCTCGGtt > 2:425696/1‑139 (MQ=255) tGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGtt > 1:118677/1‑139 (MQ=255) tGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGtt > 5:279396/1‑139 (MQ=255) ccGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGttt > 3:156944/1‑138 (MQ=255) ccGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGttt > 7:162638/1‑138 (MQ=255) ccGGCTGAAGTTAATTTCTGATCAAACGTTCAAACAATGCCTTTTAA‑CACGCCGAGTTTCTCAAGCAGCCCGCCAAAACCAAGGACAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGtta > 2:393094/1‑137 (MQ=255) aaTTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTc > 6:429623/1‑138 (MQ=255) aaaCGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACa < 5:429623/139‑1 (MQ=255) aaaCGGTGAAACAAGGCCTTTTAA‑CACGCCGAGGTGCTCAAGCAGACCGCCAAAAGCAAGGCCAAAGATGCTGACGACGAGAGAATCAAGCCTACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACa < 6:158290/139‑1 (MQ=255) cctgtGAACCAATTATTTTAAA‑AAGGCCGCGTTTTTCAAGACGACAGCCAAAACCAAGTCAAAAGATGAGGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATc < 2:95089/135‑1 (MQ=255) aCGTTCAAACAATGAATTTTAA‑CCCGCCGCGTTTCTCACGCAGACCCCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATc < 2:144109/139‑1 (MQ=255) tGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATa > 4:348663/1‑137 (MQ=255) aCTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAgaga < 7:326876/139‑1 (MQ=255) cTTTTAT‑CAGGCGGAGTTTCTAAAGCATACCGCCAAAACCAAGGCCAACGAGGATGACGACGATAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAgaga < 8:367015/138‑1 (MQ=255) cTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAgaga < 7:195834/138‑1 (MQ=255) ttttAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAg < 7:241592/139‑1 (MQ=255) tttAACCACGCCGCGTTTCTCAAGCAGACCGCCAAAACCAACGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAg < 7:286956/139‑1 (MQ=255) ttAA‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAg < 2:126629/137‑1 (MQ=255) aa‑CACGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGt > 7:124405/1‑139 (MQ=255) aa‑CACGCCGAGTTTCTCAAGCAGACCGCAAAACCCACGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCg < 2:2129/138‑1 (MQ=255) accacGCCTAGTTTCTCAAGCAGACCGCCAAAACCAGGGCCAACTATTATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCg < 3:382103/136‑1 (MQ=255) cGCCGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACAACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTa < 3:284704/139‑1 (MQ=255) cGCCGAGTTTCTCAAGCACACCGCCAAAACCAAGGCCAAAGAGGAGGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTa < 2:167247/139‑1 (MQ=255) ccGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACg < 4:109546/139‑1 (MQ=255) ccGAGTTTCTCAAGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACg > 2:242965/1‑139 (MQ=255) ccGAGTTACTCAAGCCCACCGCCAAAACCAAGGCCAAAGATGATCACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACg < 3:30847/139‑1 (MQ=255) ggtgTTTCTCAAGCACACCTCCAAAACCAAGGCCAAAGATGATCAAGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGc < 8:386429/136‑1 (MQ=255) ctcAAGCAGACCGCCAAACCCCAGCCCAAACATCATCACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCa < 4:425306/139‑1 (MQ=255) ccAACCAGACCGCCAACACCACCGCAAAAGATGCTCACTACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAATTTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCa < 1:425696/137‑1 (MQ=255) aaGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCa < 8:75536/136‑1 (MQ=255) aaGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCa < 4:356485/136‑1 (MQ=255) aaGCAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCa < 7:232337/136‑1 (MQ=255) aaGCACACCTCCAAAACCAAGCCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCa < 4:159352/136‑1 (MQ=255) ccgACCGCCAAAACCAAGGCCATAGATGTTGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCAATCGCa < 5:152879/137‑1 (MQ=255) cacacccccAAAACACACCCCAAAGTAGATCACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCAATCGCa < 2:204054/136‑1 (MQ=255) cAGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCAATCGCa < 5:255321/139‑1 (MQ=255) cAGACCGCCAAAACCAAGCCAAACGATCATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCAATCGCa < 3:307227/139‑1 (MQ=255) aGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCAATCGCAt < 2:49858/139‑1 (MQ=255) aGACCGCCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCAATCGCAt < 4:301147/139‑1 (MQ=255) accgccAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCAATCGCATgg > 6:289428/1‑139 (MQ=255) | ATACATCGCACAGCCGAAGATGTTTGCTAAAAACGCTACGATCAGTGTAGACAATGTGACATTGCCGGCTGAAGTTAATTTCTTTTCAAACGTTGAAACAATGACTTTTAA‑CACGCCGAGTTTCTCAAGCAGACCACCAAAACCAAGGCCAAAGATGATGACGACGAGAGAATCAAGCATACCGACAATTCCACCGCGGTTTAACAAGCCGTTCAAAAATTCAACATCCGTTTTAATAGAGAAGCCGTTGTACGCAGTTGCAATCGCATGG > CP006881/2270962‑2271232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |