| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 3,345,231 | A→G | V276A (GTG→GCG) | U712_17190 ← | putative polysaccharide biosynthesis protein epsC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,345,231 | 0 | A | G | 98.7% | 244.7 / NA | 77 | V276A (GTG→GCG) | U712_17190 | putative polysaccharide biosynthesis protein epsC |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (39/37); minor base T (1/0); total (40/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATGTGTTTGCCGAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCACTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGATTTGTCCGGCAGTTCGTGTGCCAAGCAGCA > CP006881/3345095‑3345366 | aaTGTGTTTGCCGAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCt < 4:342743/139‑1 (MQ=255) aTGTGTTTGCCGAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTc < 4:313075/139‑1 (MQ=255) tgtgTTTGCCGAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGCCGGCAGATTTCCGAGCCGATTGATCCGCCCGCTcc > 4:268372/1‑139 (MQ=255) gtTTGCCGAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGt > 3:137291/1‑139 (MQ=255) ttGCCGAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGa > 4:397707/1‑139 (MQ=255) tGCCGAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGAc > 4:289630/1‑139 (MQ=255) ccGAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGAc > 8:328498/1‑137 (MQ=255) cGAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACgag < 1:19817/139‑1 (MQ=255) cGAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACgag < 1:26828/139‑1 (MQ=255) cGAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACgag < 2:218320/139‑1 (MQ=255) gAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACgaga < 3:397707/139‑1 (MQ=255) aTCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAAc > 3:190593/1‑139 (MQ=255) aTCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAAc > 1:54349/1‑139 (MQ=255) aTCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAAc > 8:238148/1‑139 (MQ=255) ctctGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTg > 7:179974/1‑139 (MQ=255) tGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATg > 4:430614/1‑139 (MQ=255) tataAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGAt < 5:233026/136‑1 (MQ=255) tataAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATg < 8:270300/137‑1 (MQ=255) tataAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCg > 6:169798/1‑139 (MQ=255) tataAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCg > 8:290735/1‑139 (MQ=255) tataAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCAGATTGATCCTCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCg > 1:95705/1‑139 (MQ=255) aaaTCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAACCGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGCTGCGGtt > 4:42750/1‑139 (MQ=255) aTCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTc > 4:90866/1‑138 (MQ=255) aTCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCAGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTc > 6:293768/1‑138 (MQ=255) aTCGAATGAATGCTGTTTTCACCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTc > 1:105998/1‑138 (MQ=255) atgaatgCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAAtt > 5:241672/1‑139 (MQ=255) atgaatgCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAAtt > 5:170755/1‑139 (MQ=255) atgaatgCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAAtt > 8:154347/1‑139 (MQ=255) tgCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCt < 7:328498/139‑1 (MQ=255) ttttCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAgtgt > 6:434404/1‑139 (MQ=255) ttttCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAgtgt > 1:311316/1‑139 (MQ=255) tCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCg < 2:267008/138‑1 (MQ=255) ccccATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGa < 6:241672/138‑1 (MQ=255) gCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCTCTAGTGTCGAGGGTTAc < 2:105998/138‑1 (MQ=255) aGCAGAATGATTTCCTTAGGCTGAACCGCTCTGAGCTGACGGCAGATTTCCGAGCCGATTGCTCCGACCTCTCCCGTGACGAGACCTGTTTTGCCTTTGATGCTGTTCGAAGTTTCTCTAGTGGCGCTGGTTGCCGGcg > 3:261729/1‑138 (MQ=255) aGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCt > 8:69356/1‑139 (MQ=255) aGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCt < 2:54349/139‑1 (MQ=255) aaTGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTg > 2:283303/1‑139 (MQ=255) ttGATTTCATTAGGGGGAAACCCGGGCATCTGCCGGCACAGTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGc < 2:59884/138‑1 (MQ=255) tttCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAg < 4:137291/139‑1 (MQ=255) tCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGAc > 4:37237/1‑68 (MQ=255) tCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGAc < 3:37237/68‑1 (MQ=255) tCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGc < 7:290735/138‑1 (MQ=255) ccTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCa < 7:238148/138‑1 (MQ=255) ccTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCa < 3:430614/138‑1 (MQ=255) ttAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCTAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCt < 6:411937/104‑1 (MQ=255) ttAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCt > 5:411937/1‑104 (MQ=255) ttAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGt > 7:336757/1‑139 (MQ=255) ggCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTcc < 5:169798/138‑1 (MQ=255) ggCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCt < 6:170755/139‑1 (MQ=255) ggCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCt < 1:142484/139‑1 (MQ=255) ggCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGAGTGATCCGCCCGCTCCGGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCt < 7:170531/139‑1 (MQ=255) cTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCa < 8:336757/139‑1 (MQ=255) aaaCGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCt > 5:420533/1‑139 (MQ=255) gcgcTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTa < 3:90866/139‑1 (MQ=255) gcgcTGATCAGACGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTa < 5:293768/139‑1 (MQ=255) aCGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGAtt > 6:126058/1‑139 (MQ=255) aCGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGAtt > 1:251430/1‑139 (MQ=255) aCGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGAt < 6:125968/138‑1 (MQ=255) aCGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGAt < 1:58873/138‑1 (MQ=255) aCGGCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACAGTTTTTCCTTTGATGCGGTTCGAAATTTCGATAGTGTCGAGGGTTACCGGCTTTCAGCCGAGCAAGTCCTCAGCGTGTACAACTCTGaat > 7:166358/1‑137 (MQ=255) ggCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGATTTg < 8:242098/139‑1 (MQ=255) gCAGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGATTTGt > 4:413852/1‑139 (MQ=255) aGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCt > 8:6743/1‑114 (MQ=255) aGATTTCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCt < 7:6743/114‑1 (MQ=255) tttCCGAGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGATTTGTCCGGc < 6:132360/139‑1 (MQ=255) aGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGAt < 7:422017/124‑1 (MQ=255) aGCCGATTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGAt > 8:422017/1‑124 (MQ=255) aTTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGc < 6:330100/61‑1 (MQ=255) aTTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGc > 5:330100/1‑61 (MQ=255) aTTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCt > 3:63840/1‑62 (MQ=255) aTTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCt < 4:63840/62‑1 (MQ=255) aTTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGATTTGTCCGGCAGTTCGTGTGc > 2:103616/1‑139 (MQ=255) aTTGATCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGAGTTGTCCGGCAGTTCGTGTGc > 4:107904/1‑139 (MQ=255) aTCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGATTTGTCCGGCAGTTCGTGTGCCAag < 3:107904/139‑1 (MQ=255) tCCGCCCGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGATTTGTCCGGCAGTTCGTGTGCCAagc < 5:184752/139‑1 (MQ=255) ccgcccgcTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGATTTGTCCGGCAGTTCGTGTGCCAag > 8:59309/1‑137 (MQ=255) cccGCTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGATTTGTCCGGCAGTTCGTGTGCCAAgcagca > 4:380947/1‑139 (MQ=255) | AATGTGTTTGCCGAATCGTCCGTTCAGCTCTGTATAAATCGAATGAATGCTGTTTTCCCCATGGCCGAGCAGAATGATTTCCTTAGGCTGAAACGCGCTGATCTGACGGCAGATTTCCGAGCCGATTGATCCGCCCACTCCCGTGACGAGAACTGTTTTTCCTTTGATGCGGTTCGAAATTTCGCTAGTGTCGAGGGTTACCGGCTTTCTGCCGAGCAAGTCCTCAGCTTTTACATCTCTGATTTGTCCGGCAGTTCGTGTGCCAAGCAGCA > CP006881/3345095‑3345366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |