| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 3,514,723 | C→T | L222L (CTG→CTA) | U712_18005 ← | Gamma‑DL‑glutamyl hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,514,723 | 0 | C | T | 97.5% | 246.1 / ‑5.9 | 80 | L222L (CTG→CTA) | U712_18005 | Gamma‑DL‑glutamyl hydrolase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (44/34); minor base G (0/2); total (44/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCCCGCATAAATGCCTGCATGTGAAATTCCCGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGCAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTCGGCCTCCTGAACGACAGGAACAT > CP006881/3514593‑3514856 | cgcCCGCATAAATGCCTGCATGTGAAATTCCCGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCCCTGCTGTTCGGCTGATCGCGGTAGATAAAt > 8:32822/1‑139 (MQ=255)cgcCCGCATAAATGCCTGCATGTGAAATTCCCGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATaa < 5:167979/137‑1 (MQ=255)cgcCCGCATAAATGCCTGCATGTGAAATTCCCGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAAt > 5:143364/1‑139 (MQ=255) aaTGCCTGCATGTGAAATTCCCGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGcc < 3:108960/139‑1 (MQ=255) gCCTGCATGTGAAATTCCCGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGt > 8:392768/1‑139 (MQ=255) cTGCATGTGAAATTCCCGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGtt > 3:126695/1‑138 (MQ=255) tGCATGTGAAATTCCCGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTg > 1:365880/1‑138 (MQ=255) aTGTGAAATTCCCGTTTTATACGTATTGCTGAAATCGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAac < 3:79387/139‑1 (MQ=255) aTGTGAAATTCCCGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAac < 3:63018/139‑1 (MQ=255) aTGTGAAATTCCCGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAac < 6:143364/139‑1 (MQ=255) tCCCGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTg > 7:312566/1‑138 (MQ=255) ccGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGcac < 4:21323/139‑1 (MQ=255) ccGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCGTTATGTTCTGAGGGGCGACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGcac < 8:84265/139‑1 (MQ=255) ttATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGcc > 3:388230/1‑139 (MQ=255) tataCGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCTCTGCTGTTCGGCTGAGCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGcc < 7:173552/138‑1 (MQ=255) cGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAg < 2:365880/139‑1 (MQ=255) cGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGGAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAg < 7:438068/139‑1 (MQ=255) gTATTGATGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTAGCCCACTGCCCAATGCTGTTCGGCTGATCGCGGGATATAAAAGCCGAGTGGCTGTTGAAACACATATTGCACAAGCCCCGAg < 5:195176/138‑1 (MQ=255) aTTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATa < 5:306920/93‑1 (MQ=255) aTTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATa > 6:306920/1‑93 (MQ=255) aTTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGcac < 7:218001/126‑1 (MQ=255) aTTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGcac > 8:218001/1‑126 (MQ=255) tGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAAt > 7:417303/1‑138 (MQ=255) aaaTAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGcac > 7:379621/1‑119 (MQ=255) aaaTAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGcac < 8:379621/119‑1 (MQ=255) aaaTAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAg < 3:205623/138‑1 (MQ=255) aaaTAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGAACAAGACCCGAGCAATCAAAGc > 4:72802/1‑139 (MQ=255) aTAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAac < 8:19963/106‑1 (MQ=255) aTAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAac > 7:19963/1‑106 (MQ=255) aTAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACatat < 6:442573/112‑1 (MQ=255) aTAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACatat > 5:442573/1‑112 (MQ=255) aTCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATaa < 1:108959/76‑1 (MQ=255) aTCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATaa > 2:108959/1‑76 (MQ=255) ggCTTTATGTTATGAGGGGCTACCTTCTCGACCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATTCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTgagtc > 2:195156/1‑135 (MQ=255) tttATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGc > 6:81942/1‑139 (MQ=255) tATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACAGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGcc > 6:155522/1‑138 (MQ=255) aTGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCa > 4:291973/1‑138 (MQ=255) aTGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCa < 4:126695/138‑1 (MQ=255) aTGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCa < 3:291973/138‑1 (MQ=255) aTGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCa < 1:54602/138‑1 (MQ=255) aTGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCa < 5:222768/138‑1 (MQ=255) tGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCaaa < 7:392768/139‑1 (MQ=255) tGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCaa < 4:139071/138‑1 (MQ=255) cTGAGGGGCTACCTTCTCGCCCACTGCCCCCTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGCACCACATATTGCACACGCCCCGAGCGATCAACGCCCTCTGCCGGCGTGCTTCCGCCAAAccca > 1:374542/1‑139 (MQ=255) tGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGCGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAAcaca > 1:354913/1‑138 (MQ=255) tGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAg < 1:165953/99‑1 (MQ=255) tGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAg > 2:165953/1‑99 (MQ=255) tGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAAcaca > 3:269667/1‑138 (MQ=255) gAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAACCACata > 8:37246/1‑139 (MQ=255) ggggCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACgg > 1:427836/1‑116 (MQ=255) ggggCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACgg < 2:427836/116‑1 (MQ=255) gCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGa < 8:55692/139‑1 (MQ=255) cTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGa > 5:218901/1‑138 (MQ=255) aCCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAac < 5:315444/69‑1 (MQ=255) aCCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAac > 6:315444/1‑69 (MQ=255) ctcGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGata > 4:421817/1‑139 (MQ=255) tcGCCCCCTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCGCAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGata > 7:117679/1‑138 (MQ=255) tcGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGata > 8:97198/1‑138 (MQ=255) ccactgcTGTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTCGGcc < 6:218901/139‑1 (MQ=255) tgctgTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCa > 7:365962/1‑102 (MQ=255) tgctgTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCa < 8:365962/102‑1 (MQ=255) tgTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTCGGCCTCCTGaa > 7:352262/1‑139 (MQ=255) tgTTCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTCGGCCTCCTGaa > 2:39073/1‑139 (MQ=255) ttCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGcac > 1:351742/1‑54 (MQ=255) ttCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGcac < 2:351742/54‑1 (MQ=255) ttCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCaaa < 3:329230/99‑1 (MQ=255) ttCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCaaa > 4:329230/1‑99 (MQ=255) ttCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTCGGCCTCCTGAAc > 1:441562/1‑138 (MQ=255) ttCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTCGGCCTCCTGAAc > 1:5606/1‑138 (MQ=255) ttCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTCGGCCTCCTGAACg > 5:285480/1‑139 (MQ=255) ttCGGCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATAAATTTTTCGGCCTCCTGAACg > 4:334180/1‑139 (MQ=255) ggCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTCGGCCTCCTGAACGACa < 4:269667/139‑1 (MQ=255) ggCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTCGGCCTCCTGAACGACa < 4:388230/139‑1 (MQ=255) ggCTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTATCGGCCTCCTGAACGACa < 8:417303/139‑1 (MQ=255) cTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCa < 1:44099/92‑1 (MQ=255) cTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCa > 2:44099/1‑92 (MQ=255) cTGATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTCGGCCTCCTGAACGACAg > 7:92876/1‑138 (MQ=255) gATCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTAGGCCTCCTGAACGACAGGaa > 6:47696/1‑139 (MQ=255) aTCGCGGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAACCACATATGGGACACCGATATAGTTTTCGGCCTCCTGAACGACAggca > 4:79345/1‑136 (MQ=255) cgcgGTAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTCGGCCTCCTGAACGACAGGAACAt > 4:194962/1‑139 (MQ=255) | CGCCCGCATAAATGCCTGCATGTGAAATTCCCGTTTTATACGTATTGCTGAAATAGACGACATCACCAGGCTTTATGTTCTGAGGGGCTACCTTCTCGCCCACTGCCCACTGCTGTTCGGCTGATCGCGGCAGATAAATGCCGAGTGCCTGTTGAAACACATATTGCACAAGCCCCGAGCAATCAAAGCCCTCTGACGGCGTGCTTCCGCCAAACACATATGGGACACCGATATATTTTTCGGCCTCCTGAACGACAGGAACAT > CP006881/3514593‑3514856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |