| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 3,722,008 | C→T | A293A (GCG→GCA) | U712_19190 ← | PTS system sucrose‑specific EIIBC component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,722,008 | 0 | C | T | 99.0% | 321.3 / ‑6.4 | 103 | A293A (GCG→GCA) | U712_19190 | PTS system sucrose‑specific EIIBC component |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (51/51); total (51/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 103 total aligned reads displayed.
CATTCGCCATTGACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATAAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAAAACGATAAGTGAATATGTGCCCCCGAAAATCAGACCCGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATCCCGGAGCCAAGCGCTCTGCCCAAAGGACCAATCGCGATAAAAGCGACAAATCCAGTGACAATCACTGTAACAAAAGGTGTAACAAG > CP006881/3721875‑3722142 | cATTCGCCATTGACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGa > 7:445864/1‑138 (MQ=255)cATTCGCCATTGACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGa > 5:433997/1‑138 (MQ=255) tCGCCATTGACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCACTCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACaaa > 2:118953/1‑139 (MQ=255) gCCATTGACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAAc > 6:294249/1‑139 (MQ=255) gCCATTGACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAAc > 5:281752/1‑139 (MQ=255) gACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCTTGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGGGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa < 7:155688/138‑1 (MQ=255) gACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa < 5:294249/138‑1 (MQ=255) gACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa < 5:258108/138‑1 (MQ=255) gACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa < 3:204655/138‑1 (MQ=255) gACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa < 2:298536/138‑1 (MQ=255) gACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa < 1:160106/138‑1 (MQ=255) aCCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCAt < 1:372314/138‑1 (MQ=255) aGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTc < 6:374725/139‑1 (MQ=255) aTCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTTCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCa > 3:340727/1‑138 (MQ=255) aTCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa < 5:309013/132‑1 (MQ=255) aTCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa > 5:318600/1‑132 (MQ=255) aTCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa > 6:309013/1‑132 (MQ=255) aTCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa < 6:318600/132‑1 (MQ=255) aTCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCat < 1:52392/139‑1 (MQ=255) aTCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCat < 6:433997/139‑1 (MQ=255) cagcaAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGCCCTGCGACACAACCGGCTTGGTCATATACa > 7:320492/1‑139 (MQ=255) cagcaAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACa < 7:2098/139‑1 (MQ=255) cagcaAGTAGTTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACa > 4:186904/1‑139 (MQ=255) agtattTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAAGACGTGCCCCCGAAAATCAGCCCTGCGACAAAACCGGCATGGTCATATACATAAGt > 8:12521/1‑139 (MQ=255) agtagtTTTTGCCTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGt > 8:378084/1‑139 (MQ=255) cTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGt < 4:216558/139‑1 (MQ=255) cTATATCTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGt < 1:232580/139‑1 (MQ=255) tatataTGCAATTAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTa < 7:85743/139‑1 (MQ=255) tGCAATTAGCCTTGAATCAATGGCATGCAAGCTGTGATGAACGCCTGGCTGAAGGATGAGTGAATCCGTGCCCCCGAAAATCATAACTGCGACAAACGGGGCATGGTCATATACATAAGTTAAAGCAACCTTAAtgcgg < 6:95850/139‑5 (MQ=255) aGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGcc > 3:341949/1‑137 (MQ=255) gCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACa > 2:373153/1‑107 (MQ=255) gCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACa < 1:373153/107‑1 (MQ=255) gCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCaa < 8:445864/138‑1 (MQ=255) tGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGct > 1:393048/1‑139 (MQ=255) tGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATCCCGGAGCCACGCGct > 1:218929/1‑139 (MQ=255) gCCTCAATCGCATGGATGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACATGCGACAAAACCGGCATGGTCATATACATTAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGctc > 6:207522/1‑139 (MQ=255) gCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACa > 1:279684/1‑102 (MQ=255) gCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACa < 2:279684/102‑1 (MQ=255) gCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAgcgc > 4:269328/1‑137 (MQ=255) gCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGctc > 3:278938/1‑139 (MQ=255) gCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACAGAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGctc > 5:447323/1‑139 (MQ=255) cgtCAATCGCATGGATGATGTGATTATCGCCTGTCAGCACGATGTGTGAATACGTGCCCCGGAAAATCAGACCTGCGACAAAACCGGCTTGGTAATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAgcgcg < 4:340727/135‑2 (MQ=255) ccTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACGTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGct < 1:350926/137‑1 (MQ=255) ccTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGct < 4:341949/137‑1 (MQ=255) ccTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGct < 5:135698/137‑1 (MQ=255) ccTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGct < 2:151260/137‑1 (MQ=255) ccTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGct < 6:145295/137‑1 (MQ=255) ccTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGct < 2:393048/137‑1 (MQ=255) ccTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGct < 7:36407/137‑1 (MQ=255) ccTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGct < 3:269328/137‑1 (MQ=255) aTCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa > 4:371559/1‑84 (MQ=255) aTCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa < 3:371559/84‑1 (MQ=255) aTCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCa < 7:229619/90‑1 (MQ=255) aTCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCa < 1:96309/90‑1 (MQ=255) aTCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCa > 8:229619/1‑90 (MQ=255) aTCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCa > 2:96309/1‑90 (MQ=255) aTCGCATGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGcc > 2:174926/1‑137 (MQ=255) aTGGAAGCTGTGATGAACGCCTGTCAGCACGATGCGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAggg > 5:223836/1‑138 (MQ=255) aTGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCg < 3:291454/115‑1 (MQ=255) aTGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCg > 4:291454/1‑115 (MQ=255) tGGAAGCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAgggc > 6:405301/1‑137 (MQ=255) gCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACa < 4:242930/85‑1 (MQ=255) gCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACa > 3:242930/1‑85 (MQ=255) gCTGTGATGAACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATc > 4:375536/1‑139 (MQ=255) tgatgaACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa > 5:242082/1‑69 (MQ=255) tgatgaACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCa < 6:242082/69‑1 (MQ=255) tgatgaACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAAt > 4:286781/1‑134 (MQ=255) tgatgaACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAAt < 3:286781/134‑1 (MQ=255) gaACGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATaa > 3:416250/1‑138 (MQ=255) cGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGc > 5:417213/1‑85 (MQ=255) cGCCTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGc < 6:417213/85‑1 (MQ=255) cTGTCAGCACGATGAGTGAATCCGTGCCCCCGAAAAGCAGCCCTGCGACAAAACCGGCAGGGTCATATACATAAGTTATAGCACCCGTAATGCCGGAGCCAAGCGCTCTTCCTAGAGGGCCACTCGCGATAAAAGcaa > 5:17016/1‑136 (MQ=255) cTGTCAGCACGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGcaa > 2:336149/1‑136 (MQ=255) gtcagcaCGATGAGTGAATACGTGCCACCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCCCGATAAAAGCAACa > 1:19909/7‑138 (MQ=255) caCGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGcaacaaccccg > 4:409994/2‑134 (MQ=255) caCGATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAAcccg > 1:156969/2‑138 (MQ=255) gATGAGTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCTGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCTATAAAAGCAACAAACCCGGTg < 4:327961/139‑1 (MQ=255) gTGAATACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAAt < 1:97549/139‑1 (MQ=255) aatccgtgCCCCCGAAAATCAGACCCGCCACAAAACCGGCTTGGTAAAATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCa < 6:269245/133‑1 (MQ=255) aaTACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCa > 5:378209/1‑138 (MQ=255) aaTACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCa < 4:416250/138‑1 (MQ=255) aaTACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCa > 7:417405/1‑138 (MQ=255) aaTACGTGCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCa < 3:375536/138‑1 (MQ=255) atacGTGCCCCCGAAAATCAGCCCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGGAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCAca < 3:106799/139‑2 (MQ=255) tacgtgCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGct < 1:65355/84‑1 (MQ=255) tacgtgCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGct > 2:65355/4‑87 (MQ=255) cgtgCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGt < 7:378084/137‑1 (MQ=255) tgCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACa > 7:50896/1‑47 (MQ=255) tgCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACa < 8:50896/47‑1 (MQ=255) tgCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTaa > 7:375844/1‑138 (MQ=255) tgCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTaa > 7:7451/1‑138 (MQ=255) tgCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTaa > 5:38798/1‑138 (MQ=255) gCCCCCGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACa < 1:174926/139‑1 (MQ=255) cccccGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACa > 7:289479/1‑138 (MQ=255) cccccGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACa > 2:18012/1‑138 (MQ=255) cccccGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACa < 8:289479/138‑1 (MQ=255) ccccGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACaaa < 6:38798/139‑1 (MQ=255) cGAAAATCAGACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATgg > 7:21122/1‑139 (MQ=255) tCATACCTGCGCCAAAACCGGCATGGTCATATAAATAAGTTAAAGCAACCGGAATGCCTGAGCCAAGCGCTCTGCCTAGAGGGAAAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGgtgtca < 5:30289/138‑3 (MQ=255) gACCTGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAg < 1:118953/139‑1 (MQ=255) | CATTCGCCATTGACCAGATCGGCAGCAAGTAGTTTTTGCCTATATCTGCAATAAGCCCTGCCTCAATCGCATGGAAGCTGTGATGAACGCCTGTCAAAACGATAAGTGAATATGTGCCCCCGAAAATCAGACCCGCGACAAAACCGGCATGGTCATATACATAAGTTAAAGCAACCGTAATCCCGGAGCCAAGCGCTCTGCCCAAAGGACCAATCGCGATAAAAGCGACAAATCCAGTGACAATCACTGTAACAAAAGGTGTAACAAG > CP006881/3721875‑3722142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |