| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 3,722,173 | T→C | T238T (ACA→ACG) | U712_19190 ← | PTS system sucrose‑specific EIIBC component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,722,173 | 0 | T | C | 99.3% | 452.3 / NA | 138 | T238T (ACA→ACG) | U712_19190 | PTS system sucrose‑specific EIIBC component |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (67/70); minor base A (0/1); total (67/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 138 total aligned reads displayed.
AAGTTAAAGCAACCGTAATCCCGGAGCCAAGCGCTCTGCCCAAAGGACCAATCGCGATAAAAGCGACAAATCCAGTGACAATCACTGTAACAAAAGGTGTAACAAGCAAATCTACCGCATGCGGAACTACTTTTCTTGTCCATTTCTCTACCTTGCTCATCACATAAACCGCCAACAAGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGCGCGATATCAAATCCGAACAGATGCATATAATCAGGGGTTGCTTCCGCCAAACCCCAT > CP006881/3722037‑3722305 | aaGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGATCCACTTTTCTCGt > 4:419721/1‑139 (MQ=255)aaGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGt > 8:243239/1‑139 (MQ=255)aaGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGt > 7:61598/1‑139 (MQ=255)aaGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGt > 6:198936/1‑139 (MQ=255)aaGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGt > 3:139197/1‑139 (MQ=255)aaGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGt > 2:406192/1‑139 (MQ=255)aaGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAAACCACCGCATGTGGACCCACTTTTCTCGt > 6:273985/1‑139 (MQ=255) aGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTc < 1:121880/139‑1 (MQ=255) aGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTc < 6:342400/139‑1 (MQ=255) aGTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTc < 4:332733/139‑1 (MQ=255) gTTAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGAGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGCTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTc > 5:53163/1‑138 (MQ=255) ttAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCa < 7:12521/139‑1 (MQ=255) ttAAAGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCa < 1:336149/139‑1 (MQ=255) aGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTtc > 7:51180/1‑139 (MQ=255) aGCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTtc > 3:419664/1‑139 (MQ=255) gCAACCGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTtct < 8:61598/139‑1 (MQ=255) ccGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTc > 2:302611/1‑128 (MQ=255) ccGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTc < 1:302611/128‑1 (MQ=255) ccGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTtct > 5:191219/1‑135 (MQ=255) ccGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTtct < 6:191219/135‑1 (MQ=255) ccGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTAc > 6:151524/1‑139 (MQ=255) cGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTAcc < 1:197981/139‑1 (MQ=255) cGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTAcc < 8:320492/139‑1 (MQ=255) cGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTAcc < 3:241573/139‑1 (MQ=255) cGTAATGCCGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTAcc < 6:53163/139‑1 (MQ=255) atgccGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGc < 6:378209/136‑1 (MQ=255) ccGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCtc < 1:18012/138‑1 (MQ=255) ccGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCtc < 1:406192/138‑1 (MQ=255) ccGGAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCtc < 4:419664/138‑1 (MQ=255) cagtatccAAGCGCTCTTGCTATAGTGCCAATCGAGATTAAAGCATCATACCCGGGGACAATCACAGTAACATATGGTTTAAGAAGCATATGCACCGCTTGTTGAAACACTTTTCTAGTCCATTTCTCTACCTTGCtc < 8:21122/132‑1 (MQ=255) aggAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCtcat < 5:405301/138‑1 (MQ=255) ggAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCa > 7:29210/1‑120 (MQ=255) gAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCa > 8:268619/1‑119 (MQ=255) gAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCa < 1:134153/119‑1 (MQ=255) gAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCa > 2:134153/1‑119 (MQ=255) gAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTAcc > 5:142824/1‑129 (MQ=255) gAGCCAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTGGCtcatca > 3:282338/1‑139 (MQ=255) ccAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACAt < 7:209647/139‑1 (MQ=255) cAAGCGCTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGGACCACTTTTCTCGTCCATTTCTCTACCTAGCTCATCACATa < 5:207522/139‑1 (MQ=255) cgcTCTGCCTAGAGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACAcc < 8:375844/139‑1 (MQ=255) gaGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGAc < 7:243239/138‑1 (MQ=255) gaGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGAc < 1:44314/138‑1 (MQ=255) gaGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGAc < 1:92806/138‑1 (MQ=255) aGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGcaag < 5:85210/132‑4 (MQ=255) aGGGCCAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGcaag > 6:85210/1‑129 (MQ=255) ggccAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAgg < 2:156969/137‑1 (MQ=255) ccAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGa < 5:202458/139‑1 (MQ=255) cAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCa < 3:248901/94‑1 (MQ=255) cAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGc < 2:373973/108‑1 (MQ=255) cAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGc < 6:429741/108‑1 (MQ=255) cAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCtcat < 4:219662/112‑1 (MQ=255) cAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCCTCACCTCCACCGCAAGCAGGACAGTGa > 6:24192/1‑138 (MQ=255) cAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATcaca < 8:155732/116‑1 (MQ=255) cAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATcaca > 7:155732/1‑116 (MQ=255) cAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACAt > 3:306669/1‑117 (MQ=255) cAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACAt < 4:306669/117‑1 (MQ=255) cAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGa > 3:313936/1‑138 (MQ=255) cAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGa < 4:313936/138‑1 (MQ=255) cAATCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGa > 2:54248/1‑138 (MQ=255) cAAGCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGAt < 7:228314/139‑1 (MQ=255) aTCGCGATAAAAGCAACAAACCCGGTGACAATCCCAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATaa < 5:47250/139‑1 (MQ=255) aTCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGcaag > 5:52523/1‑122 (MQ=255) aTCGCGATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGcaag < 6:52523/125‑4 (MQ=255) cgATAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGt < 6:447323/139‑1 (MQ=255) gATAAAAGCAACAAACCCGGGGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGtt < 6:223836/139‑1 (MQ=255) aTAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCtcat > 4:120034/1‑104 (MQ=255) aTAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCtcat < 3:120034/104‑1 (MQ=255) aTAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGAt < 8:385688/131‑1 (MQ=255) aTAAAAGCAACAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGAt > 7:385688/1‑131 (MQ=255) aaaaGCAACAAACCCGGTGACAATCACAGTAAAAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTccc < 3:468/139‑1 (MQ=255) aCAAACCCGGTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGAc < 4:264502/116‑1 (MQ=255) acccggTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCgag < 3:215465/134‑1 (MQ=255) acccggTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCgag < 4:139197/134‑1 (MQ=255) gTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATGAGCTACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAgag < 4:278938/139‑3 (MQ=255) gTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAgag < 3:186904/139‑3 (MQ=255) gTGACAATCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAgag > 4:46904/1‑137 (MQ=255) aaTCACAGTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGata > 4:215308/1‑139 (MQ=255) agTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTc > 2:234904/2‑55 (MQ=255) agTAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTc < 1:234904/54‑1 (MQ=255) tAACAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATcc > 1:196776/1‑139 (MQ=255) aCAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTc > 6:391915/1‑51 (MQ=255) aCAAATGGTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTc < 5:391915/51‑1 (MQ=255) tggTGTAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGa < 1:119174/138‑1 (MQ=255) tgtAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGAc > 6:112388/1‑84 (MQ=255) tgtAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGAc < 5:112388/84‑1 (MQ=255) tgtAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATg > 8:46385/1‑138 (MQ=255) tgtAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATg > 3:191426/1‑138 (MQ=255) tgtAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGc < 2:215886/139‑1 (MQ=255) tAACAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATa > 7:362505/1‑67 (MQ=255) aCAAGCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCCCATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCatg > 8:300294/1‑137 (MQ=255) gCAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAgg > 1:327517/1‑79 (MQ=255) cAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAAt > 5:122941/1‑137 (MQ=255) aTCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCgag > 8:196519/1‑99 (MQ=255) tccaCCGCATGTGGAACCACTTTTCTCGTCCAATTCTCTACCTTGCTCATCACATACAGCTCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAATAGCTATATCAAATCCGAAAAGATGCATGTAATCAggtg < 1:323082/136‑3 (MQ=255) cATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGAc > 3:45613/1‑64 (MQ=255) cATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGAc < 4:45613/64‑1 (MQ=255) cATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTc > 4:78276/1‑139 (MQ=255) gAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCaa > 8:14238/1‑139 (MQ=255) tttCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCAt < 8:414114/138‑1 (MQ=255) ttCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCAt < 4:171695/137‑1 (MQ=255) | AAGTTAAAGCAACCGTAATCCCGGAGCCAAGCGCTCTGCCCAAAGGACCAATCGCGATAAAAGCGACAAATCCAGTGACAATCACTGTAACAAAAGGTGTAACAAGCAAATCTACCGCATGCGGAACTACTTTTCTTGTCCATTTCTCTACCTTGCTCATCACATAAACCGCCAACAAGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGCGCGATATCAAATCCGAACAGATGCATATAATCAGGGGTTGCTTCCGCCAAACCCCAT > CP006881/3722037‑3722305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |