| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 855,056 | A→T | N196I (AAT→ATT) | U712_04150 → | HTH‑type transcriptional regulator glvR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 855,056 | 0 | A | T | 98.9% | 273.7 / NA | 88 | N196I (AAT→ATT) | U712_04150 | HTH‑type transcriptional regulator glvR |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base T (42/45); total (42/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TAATTTGATGCGCGATGATTTTAAAGTGAACGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGAATTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAGCATTGTTCCG > CP006881/854925‑855188 | taatttGATGCGCGATGATTTTAAAGTGAACGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTaaa < 3:192116/138‑1 (MQ=255) cgATGATTTTAAAGTGAACGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTc > 5:112886/1‑139 (MQ=255) cgATGATTTTAAAGTGAACGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTc < 2:51344/139‑1 (MQ=255) aaGTGAACGATCTGTTTATCATCATTTCTCTTTCCGGATAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGAc < 7:207464/139‑1 (MQ=255) aGTGAACGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACt < 3:141414/139‑1 (MQ=255) aGTGAACGATCTGTTTATCATCATATCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACt < 4:204192/139‑1 (MQ=255) aaCGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCg > 5:144188/1‑138 (MQ=255) aaCGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCg > 5:227378/1‑138 (MQ=255) aaCGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCg > 3:282945/1‑138 (MQ=255) aaCGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCg > 3:448479/1‑138 (MQ=255) aaCGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCg > 1:55704/1‑138 (MQ=255) aaCGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCg > 4:447127/1‑138 (MQ=255) aaCGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCg > 1:254839/1‑138 (MQ=255) aaCGATCTGTTTATCATAATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATACCCTTTATTTCAATTACGATTTTAAAAAACAATGTCATCGCCCAGCTGACTCCg > 1:12913/1‑138 (MQ=255) aCGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCa < 5:276640/139‑1 (MQ=255) tCTGTTTATCATCATTTCTCTTTCCGGAGAAACACAGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATaa > 3:447006/1‑138 (MQ=255) tttATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCttt < 5:188262/139‑1 (MQ=255) tcatcaTTTCTCTTTCCGGAGAAACACCGGAGCTAATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGc < 8:245499/139‑1 (MQ=255) catcatTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTaaaa < 4:231968/97‑1 (MQ=255) catcatTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTaaaa > 3:231968/1‑97 (MQ=255) atcatTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCg < 4:448479/138‑1 (MQ=255) atcatTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCg < 6:21063/138‑1 (MQ=255) atcatTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCg < 2:254839/138‑1 (MQ=255) atcatTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCg < 2:411286/138‑1 (MQ=255) atcatTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGa > 3:92066/1‑139 (MQ=255) tttCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTcc > 6:288363/1‑102 (MQ=255) tttCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTcc < 5:288363/102‑1 (MQ=255) tttCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAg > 6:316094/1‑139 (MQ=255) ctctTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCa < 3:416544/138‑1 (MQ=255) ctctTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCa < 5:316094/138‑1 (MQ=255) ctctTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGAAAAGTGTATTCCCTTTATTTCCATTACGATTTAAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCa < 3:377543/138‑1 (MQ=255) ctTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAAc > 8:22674/1‑139 (MQ=255) tCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACt > 3:420158/1‑108 (MQ=255) tCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACt < 4:420158/108‑1 (MQ=255) tCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCtg > 2:433165/1‑139 (MQ=255) tCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCtg > 7:61871/1‑139 (MQ=255) ccGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCtg < 6:144188/138‑1 (MQ=255) ccGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCtg < 1:382840/138‑1 (MQ=255) gAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCg > 7:250095/1‑111 (MQ=255) gAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCg < 8:250095/111‑1 (MQ=255) cTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGaa < 2:196969/139‑1 (MQ=255) aTTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACg > 7:381379/1‑138 (MQ=255) tCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCg < 5:379145/100‑1 (MQ=255) tCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCg > 6:379145/1‑100 (MQ=255) tCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAAtt > 5:327512/1‑139 (MQ=255) aGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGt < 4:282945/139‑1 (MQ=255) aGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGt < 2:219385/139‑1 (MQ=255) ggCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACATTTAAGCGATAGAACGGAAATTGt < 6:124406/139‑1 (MQ=255) tttCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGa > 7:379213/1‑112 (MQ=255) tttCTGCAAAGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGa < 8:379213/112‑1 (MQ=255) aGGGTATTCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCACACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCGCCGGTTTTtct > 6:8629/1‑139 (MQ=255) gTATTCCCTTTATTTCCATTAAGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGt < 8:381379/139‑1 (MQ=255) gTATTACCTTTATTTCCATTACTATTATAATACACAATGTCCTCGCACAGCTGACTCCGAATAATCTTTATGCGACAAGCTAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGt < 2:12913/139‑1 (MQ=255) tCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGc > 8:139511/1‑139 (MQ=255) tCCCTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGACCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCGTTTGGACCGTTATTTATAGttttc > 7:384086/1‑136 (MQ=255) cccTTAATTACCATTA‑GCATTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCg < 7:196803/138‑1 (MQ=255) cccttATGTCCATTACGATTCTAAAAAACAATCTCCTCGCCCAGCTGACTCCGCATAATCTGTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGACCGCAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCg < 6:392357/135‑1 (MQ=255) ccTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCg < 5:214138/138‑1 (MQ=255) ccTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCg < 6:227378/138‑1 (MQ=255) ccTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCg < 6:112886/138‑1 (MQ=255) ccTTTATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCg < 1:433165/138‑1 (MQ=255) ttATTTCCCTTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCCACCCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGGGAAGc > 3:391426/1‑139 (MQ=255) ttATTTCCATTACGATTTTAAAACACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCCCCGTTTTTTCTCGTTGGCGAAg > 3:429955/1‑138 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGGTGACTCCGCATAATCTTTATGCGACTAGCAAACCTGTGACT‑TTAAGCGATAGAACGGTAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAg > 8:315498/1‑138 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGa > 6:333450/1‑91 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGa < 5:333450/91‑1 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTGTCGTTGGCGAAGc > 8:195320/1‑139 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTTGCGAAg > 6:22500/1‑138 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCg > 6:139466/1‑135 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCg > 8:254979/1‑135 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCg < 5:139466/135‑1 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAg > 7:344470/1‑138 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAg > 1:2327/1‑138 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAg > 3:398987/1‑138 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAg > 7:70325/1‑138 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAg > 8:151831/1‑138 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTGATCGTTGGCGAAg > 6:36684/1‑138 (MQ=255) ttATTTCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGATTTTTCTCGTTGGCg < 7:254979/135‑1 (MQ=255) tCCATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAGCATTg < 4:92066/138‑1 (MQ=255) cATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTATGCGATAGAAGGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAGCATTGtt < 1:157243/138‑1 (MQ=255) cATTACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACAGTTTTATCTCGTTGTCGAAGCATTGtta > 2:157243/1‑138 (MQ=255) cATTACGATTTTAAAAAACAATGGCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAAACTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTATTTCTCGTTGGCGAAGCATTGTTc < 4:166151/139‑1 (MQ=255) ttACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAGCATTGTTcc < 5:377550/138‑1 (MQ=255) ttACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAGCATTGTTcc > 6:377550/1‑138 (MQ=255) ttACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAGCATTGTTCcg < 3:402088/139‑1 (MQ=255) ttACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAGCATTGTTCcg < 2:55704/139‑1 (MQ=255) ttACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAGCATTGTTCcg < 4:427544/139‑1 (MQ=255) ttACGATTTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAGCATTGTTCcg < 4:432903/139‑1 (MQ=255) | TAATTTGATGCGCGATGATTTTAAAGTGAACGATCTGTTTATCATCATTTCTCTTTCCGGAGAAACACCGGAGCTGATTCCTCAGGCAAGAATGCTTTCTGCAAAGGGTATTCCCTTTATTTCCATTACGAATTTAAAAAACAATGTCCTCGCCCAGCTGACTCCGCATAATCTTTATGCGACAAGCAAACCTGTGACA‑TTAAGCGATAGAACGGAAATTGTCGCTTTTGCACCGTTTTTTCTCGTTGGCGAAGCATTGTTCCG > CP006881/854925‑855188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |