| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 3,722,275 | A→G | Y204Y (TAT→TAC) | U712_19190 ← | PTS system sucrose‑specific EIIBC component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,722,275 | 0 | A | G | 98.8% | 255.1 / ‑5.0 | 82 | Y204Y (TAT→TAC) | U712_19190 | PTS system sucrose‑specific EIIBC component |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (46/34); total (47/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.99e-01 | |||||||||||
CAAATCTACCGCATGCGGAACTACTTTTCTTGTCCATTTCTCTACCTTGCTCATCACATAAACCGCCAACAAGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGCGCGATATCAAATCCGAACAGATGCATATAATCAGGGGTTGCTTCCGCCAAACCCCATGGATTCAAAAGCGTCGGATGAATCATGATACCTCCGATGACCGCTCCCAAGTAAGGGTTGCTTCCAAACTCTTTTGAAGCACTGACACCGATTAAAATCGGC > CP006881/3722143‑3722407 | cAAATCCACCGCATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAAt > 5:122941/1‑137 (MQ=255) tccaCCGCATGTGGAACCACTTTTCTCGTCCAATTCTCTACCTTGCTCATCACATACAGCTCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAATAGCTATATCAAATCCGAAAAGATGCATGTAATCAggtg < 1:323082/136‑3 (MQ=255) cATGTGGAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTc > 4:78276/1‑139 (MQ=255) gAACCACTTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCaa > 8:14238/1‑139 (MQ=255) ctTTTCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCa > 3:171695/1‑139 (MQ=255) tttCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCAt < 8:414114/138‑1 (MQ=255) ttCTCGTCCATTTCTCTACCTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCAt < 4:171695/137‑1 (MQ=255) ctctACCTTGCTCATCAAATACACCGCAAGCAGGAAAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCAGAAACGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAgatt < 5:178479/138‑4 (MQ=255) ccTTGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGa < 1:54248/137‑1 (MQ=255) ttGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCAt < 8:186190/117‑1 (MQ=255) ttGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCAt > 7:186190/1‑117 (MQ=255) tGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCAt < 8:72099/116‑1 (MQ=255) tGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCAt > 7:72099/1‑116 (MQ=255) tGCTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGACAATCCCCATGGATTTAAAAGATTCGGATGAAt > 2:186769/1‑139 (MQ=255) cTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGTTGTCGCTTCCGCCAATCCCAATGGATTTAAAAGATTCGGa > 6:34364/1‑132 (MQ=255) cTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCa < 2:237447/106‑1 (MQ=255) cTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCa > 1:237447/1‑106 (MQ=255) cTCATCACATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGa < 5:34364/132‑1 (MQ=255) atcaCATACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGa < 6:257197/139‑1 (MQ=255) cacaTACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGAtt < 4:191426/139‑2 (MQ=255) cacaTACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGAtt < 8:51180/139‑2 (MQ=255) cacaTACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGAtt < 8:151440/139‑2 (MQ=255) cacaTACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGAtt > 2:16240/1‑138 (MQ=255) acaTACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGAtt < 3:78276/138‑2 (MQ=255) caTACACCGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTcc < 6:122941/139‑1 (MQ=255) ccGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAAt < 1:402396/124‑1 (MQ=255) ccGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAAt > 2:402396/1‑124 (MQ=255) ccGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGAttc < 1:354784/132‑3 (MQ=255) ccGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGAttc > 2:354784/1‑130 (MQ=255) ccGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGa > 2:159049/1‑138 (MQ=255) ccGCAAGCAGGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGAt > 2:28877/1‑139 (MQ=255) agcaggACAGGGATAACAGTTCCCTGGTATCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATTTAATCAGGTGTCGCTTCCTCCAATCCCCATTGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCg < 7:356436/134‑1 (MQ=255) agcaggACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCg > 5:5789/6‑139 (MQ=255) agcaggACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCg < 5:15486/134‑1 (MQ=255) agcaggACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCC‑AATCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGc > 1:130214/6‑139 (MQ=255) agcaggACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGGCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCg < 3:46904/134‑1 (MQ=255) caggACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCt < 1:186769/136‑1 (MQ=255) aggACAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTc < 5:200587/137‑1 (MQ=255) aCAGGGATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCACGATGACCGCTccc > 4:363653/1‑138 (MQ=255) ggATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTa > 2:291618/1‑139 (MQ=255) ggATAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATCAATCATGATTCCCCAGATGACCGCTCCCAAGTa > 4:251662/1‑139 (MQ=255) tAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCg < 1:19884/126‑1 (MQ=255) tAACAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCg > 2:19884/1‑126 (MQ=255) aCAGTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATggat > 7:417944/1‑137 (MQ=255) gTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGAcc > 4:236911/1‑120 (MQ=255) gTTCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGAcc < 3:236911/120‑1 (MQ=255) tCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCAt > 1:162913/1‑76 (MQ=255) tCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGCTTCCACCGATGACCGCTCCCAAGTATGGATTGCtg > 8:422295/1‑138 (MQ=255) tCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTcc > 5:415129/1‑123 (MQ=255) tCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTcc < 6:415129/123‑1 (MQ=255) tCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCtg > 6:174001/1‑138 (MQ=255) tCCCTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCtg > 8:85804/1‑138 (MQ=255) cccTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCAt > 7:193819/1‑75 (MQ=255) cccTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGTATGAATCATGATTCCCCCGATGCCCTCTCCCAAGTATGGATTGCtgc > 3:295781/1‑137 (MQ=255) cccTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATggat > 7:419594/1‑131 (MQ=255) cccTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATggat < 8:419594/133‑3 (MQ=255) cccTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCtgc > 5:211849/1‑137 (MQ=255) cccTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCtgc > 7:89982/1‑137 (MQ=255) cccTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCtgc > 1:206484/1‑137 (MQ=255) cccTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCtgc > 3:258100/1‑137 (MQ=255) cccTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCtgc > 1:105392/1‑137 (MQ=255) cccTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTACGCCAATCCCCATCGATTTAAAACATACTGATGAATAATGAATCACCCGATGACCGCACCCAAGTATGGATTCCtgc > 2:226086/1‑137 (MQ=255) cccTGGTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAAACAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCtgc > 1:316134/1‑137 (MQ=255) tGGTAGCCGAGAAGAGCGATATCAAAACCGAAAAGATGCATGTATTCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATACGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCa > 8:191782/1‑138 (MQ=255) gTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCTTGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCaaa < 3:167349/138‑1 (MQ=255) gTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCaaa < 8:89982/138‑1 (MQ=255) gTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCaaa < 7:14238/138‑1 (MQ=255) gTAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCaaa < 4:258100/138‑1 (MQ=255) tAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCAt > 7:394282/1‑69 (MQ=255) tAGCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCAAAct > 2:115191/1‑139 (MQ=255) gCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCAAActct > 1:350743/1‑139 (MQ=255) gCCGAGAAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCAAActct > 6:87904/1‑139 (MQ=255) gaAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCAAACTCTTTTGa < 2:206484/139‑1 (MQ=255) gaAGAGCGATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCAAACTCTTTTGa < 6:211849/139‑1 (MQ=255) agcgATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCAAACTCTTTTGAAGcg > 6:252528/2‑138 (MQ=255) agcgATATCAAATCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCAAACTCTTTTGAAGcg < 1:16240/138‑2 (MQ=255) tatCAAATCCGAAAAGATGCATGTAAACAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCAAACTCTTTTGAAGCGCTGac < 2:316134/139‑1 (MQ=255) accAACTCCGAAAAGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCAAACTCTTTTGAAGCGCTGacc < 4:282338/137‑2 (MQ=255) aaaaGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCAAACTCTTTTGAAGCGCTGACCCCGATTagaa > 8:11479/4‑139 (MQ=255) aaaaGATGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATCATGATTCCCCCGATGACCGCTCCCAAGTATGGATTGCTGCCAAACTCTTTTGAAGCGCTGACCCCGATTagaa > 8:17950/4‑139 (MQ=255) aTGCATGTAATCAGGTGTCGCTTCCGCCAATCCCCATGGATTTAAAAGATTCGGATGAATAATGATTACCCCGATGACCGCTCCCAAGTATGGATTGCTGCCAAACTCTTTTGAAGAGCTGACCCCGATTAGAATCgg > 7:340136/1‑138 (MQ=255) tGCATATAATCAGGGGTTGCTTCCGCCAAACCCCATGGATTCAAAAGCGTCGGATGAATCATGATACCTCCGATGACCGCTCCCAAGTAAGGGTTGCTTCCAAACTCTTTTGAAGCACTGACACCGATTAAAATCGGc > 7:390839/1‑138 (MQ=255) | CAAATCTACCGCATGCGGAACTACTTTTCTTGTCCATTTCTCTACCTTGCTCATCACATAAACCGCCAACAAGACAGGGATAACAGTTCCCTGGTAGCCGAGAAGCGCGATATCAAATCCGAACAGATGCATATAATCAGGGGTTGCTTCCGCCAAACCCCATGGATTCAAAAGCGTCGGATGAATCATGATACCTCCGATGACCGCTCCCAAGTAAGGGTTGCTTCCAAACTCTTTTGAAGCACTGACACCGATTAAAATCGGC > CP006881/3722143‑3722407 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |