Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	3,723,616	C→T	L144L (CTG→TTG)	U712_19195 →	putative transporter ywcJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	3,723,616	0	C	T	100.0%	274.2 / NA	86	L144L (CTG→TTG)	U712_19195	putative transporter ywcJ
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (49/37);  total (49/37)

TCGCTGGCGAGACACCCTGTACCTGTGGATGTCAAGCTATGCCGGCAATTTGATCGGCGCCATTCTATTTGCCAT‑‑‑‑‑TCTGATCAGCGCGACAGGGCTTTTTGAGGAGGCTTCTGTTCATTCCTTTTTGATTCATCTGGCAGAGCACAAAATGGAGCCGCCCGCTTCCGAACTGTTTTTCAGAGGGATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTTAAAGGGGAAGGGGCAAAGCTCTTTACCATGAT  >  CP006881/3723483‑3723749                                                                                                                                           |                                                                                                                                      cagCTGGCGCGACACCCTATACTTGTGGATGTCAAGCAATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCa                                                                                                                                  <  2:342313/137‑1 (MQ=255)  agCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCa                                                                                                                                  <  2:31686/137‑1 (MQ=255)  agCTGGCGCGACACCCTATACTTGTGGATGTCAAGCTATGCAGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCa                                                                                                                                  <  1:108979/137‑1 (MQ=255)       gcgcGACACCCTATACTTGTGGATGTCAAGCTATGCCAGCAATTTAATCGGCGCCATTCTGTTTGCAAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTAATTTGGCAGAGca                                                                                                                             >  5:6169/1‑138 (MQ=255)                  tatACTTGTGGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAgcc                                                                                                                 >  4:297035/3‑139 (MQ=255)                         gtgGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCATCCCTGTCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAgccgc                                                                                                               >  4:343327/1‑139 (MQ=255)                         gtgGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCt                                                                                                          >  6:149164/1‑139 (MQ=255)                         gtgGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCt                                                                                                          >  1:57707/1‑139 (MQ=255)                         gtgGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCt                                                                                                          >  5:360944/1‑139 (MQ=255)                         gtgGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCt                                                                                                          >  5:265763/1‑139 (MQ=255)                         gtgGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCt                                                                                                          >  4:29872/1‑139 (MQ=255)                         gtgGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTAATTTGGCAGAGCACAAAATGGAGCCGCCGGCt                                                                                                          >  7:254586/1‑139 (MQ=255)                         gtgGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCGGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCt                                                                                                          >  3:148498/1‑139 (MQ=255)                         ggagATGTCAAGCTATGCCGGCAATTTAATCGGCGCCTTTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAgccgccgg                                                                                                            <  8:254586/134‑3 (MQ=255)                          tgGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCtt                                                                                                         >  7:393048/1‑139 (MQ=255)                          tgGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCtt                                                                                                         >  7:214929/1‑139 (MQ=255)                          tgGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCtt                                                                                                         >  5:184337/1‑139 (MQ=255)                          tgGATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCtt                                                                                                         >  4:280961/1‑139 (MQ=255)                          tgGATGTCAAGCTATGCCGGCAATATAATCGGAGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCATCGCTAAGGTACTTTTTGAGGAGCCTACTGTTCATTACTTTTTGATTCATTTGGAAGAGCACAAAATGGAgccgccgccta                                                                                                         >  8:62414/1‑134 (MQ=255)                          tgGATGTCAAGCTATCCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑ACTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGACCACAAAATGGAGCCGCCGGCtt                                                                                                         >  5:13240/1‑139 (MQ=255)                            gATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCa                                                                                                                                  <  3:148964/112‑1 (MQ=255)                            gATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCa                                                                                                                                  >  4:148964/1‑112 (MQ=255)                            gATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGca                                                                                                                             <  3:108495/117‑1 (MQ=255)                            gATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGca                                                                                                                             >  4:108495/1‑117 (MQ=255)                            gATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTcc                                                                                                       >  7:77555/1‑139 (MQ=255)                            gATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTcc                                                                                                       >  5:151933/1‑139 (MQ=255)                            gATGTCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCGTcc                                                                                                       >  3:267139/1‑139 (MQ=255)                                tCAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CATGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGaat                                                                                                   <  7:305156/139‑2 (MQ=255)                                 cAAGCTATGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTGCCGaatt                                                                                                  >  2:147440/1‑137 (MQ=255)                                       aTGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCTGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGttttt                                                                                            >  4:284862/1‑139 (MQ=255)                                        tGCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGttttt                                                                                            <  3:55376/138‑1 (MQ=255)                                         gCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGttttt                                                                                            >  3:351032/1‑137 (MQ=255)                                         gCCGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGttttt                                                                                            >  8:376780/1‑137 (MQ=255)                                          ccGGCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCa                                                                                          <  6:184337/138‑1 (MQ=255)                                             gCAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTAATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCagag                                                                                       >  4:226915/1‑138 (MQ=255)                                              cAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAgga                                                                                     <  2:57707/139‑2 (MQ=255)                                              cAATTTAATCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAgg                                                                                      >  4:360245/1‑138 (MQ=255)                                                 tttaagcGGCGCCATTCTGTGTCCCAG‑‑‑‑‑CCGGACCCGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATCCATTGGCCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATg                                                                                  <  6:129006/133‑1 (MQ=255)                                                     aTCGGCGCCATTCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCtg                                                                               <  8:214929/138‑1 (MQ=255)                                                               ttCTGTTTGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTTGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCt                                                                    >  5:122145/1‑139 (MQ=255)                                                                    tttGCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTtgtgt                                                               >  1:34123/1‑139 (MQ=255)                                                                       gCCAT‑‑‑‑‑CCTGTTCAGCGCGCCGGGACTTTTTGTGGAGCGTTCTGTTCATTCCTTTTTGATTCATTTGGCAGACCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGcc                                                            <  5:48832/139‑1 (MQ=255)                                                                       gCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCCGAGGAATGCTGTGCAATTGGCTTGTGTGcc                                                            <  6:377687/139‑1 (MQ=255)                                                                       gCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGCATGCTGTGCAATTGGCTTGTGTGcc                                                            >  2:89402/1‑139 (MQ=255)                                                                       gCCAT‑‑‑‑‑CCTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGcc                                                            >  3:248779/1‑139 (MQ=255)                                                                                  cTGATCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGcc                                                       <  4:248779/138‑1 (MQ=255)                                                                                     agcAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCtttt                                                   <  5:132661/137‑1 (MQ=255)                                                                                     aTCAGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGCGCACAAAATGGAGCCGCCGGCTTCCGAATTGGTTTTAAGAGGAATGCTGTGCAATTGGCTTGTGTGGCTCGCCtttt                                                   >  3:261258/1‑139 (MQ=255)                                                                                     aTCAGCGCGACGGGACTTTTTGAGGAGCCTACTGTTCATTCCTTTTTCATTCAATTGGCAGAGCACAAAATGGAGCCGCCGGCATCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCtttt                                                   >  6:138456/1‑139 (MQ=255)                                                                                        aGCGCGACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGCCCACAAAAGGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCttttt                                                  <  4:352411/137‑1 (MQ=255)                                                                                          cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGca                                                                                                                             >  1:259690/1‑60 (MQ=255)                                                                                          cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGca                                                                                                                             <  2:259690/60‑1 (MQ=255)                                                                                          cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCt                                                                                <  6:436651/105‑1 (MQ=255)                                                                                          cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCt                                                                                >  5:436651/1‑105 (MQ=255)                                                                                          cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCtttt                                                   >  3:165091/1‑134 (MQ=255)                                                                                          cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCtttt                                                   <  4:165091/134‑1 (MQ=255)                                                                                          cgcgACGGGACTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCAtt                                              >  4:106820/1‑139 (MQ=255)                                                                                                gggacTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATg                                        <  3:284862/135‑1 (MQ=255)                                                                                                 ggacTTTTGGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGt                                       <  8:416405/136‑1 (MQ=255)                                                                                                    cTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCtgtg                                                                             >  3:110142/1‑98 (MQ=255)                                                                                                    cTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCtgtg                                                                             <  4:110142/98‑1 (MQ=255)                                                                                                    cTTTTTGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGtctc                                    >  2:383996/1‑139 (MQ=255)                                                                                                       tttGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTctctc                                  >  6:176911/1‑137 (MQ=255)                                                                                                        ttGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTctctca                                 <  8:393048/138‑3 (MQ=255)                                                                                                        ttGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTctctca                                 <  2:34123/138‑3 (MQ=255)                                                                                                         tGAGGAGCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCAAAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCaa                                <  6:360944/138‑1 (MQ=255)                                                                                                          gaggagCCTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCaaa                               <  5:149164/138‑1 (MQ=255)                                                                                                              agcgttCTGTTCATACGTTTTTGATTCATTTGGAATCGCACAAAATGTAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAaagggga                          <  2:411756/135‑1 (MQ=255)                                                                                                              agccTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAaagggga                          <  3:280961/136‑1 (MQ=255)                                                                                                                ccTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATTGAGCCGACGGCTTACGAATTTTTTTTAAGAGGAATGCTGTGCAATTTTCTTGTGTGCATCGCCTTTTTCATTCCAATTTATCTCAaaggggaag                        >  5:422389/2‑139 (MQ=255)                                                                                                                ccTTCTGTTCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAaaggggaag                        >  6:231053/2‑139 (MQ=255)                                                                                                                      gTTGATTCCTTTTTGATTCATTTGGCAGAGCACAATATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCTAAGGGGAAGGAGCa                   <  7:62414/138‑1 (MQ=255)                                                                                                                       ttCATTCCTTTTTGTTTCATTTGGCAGTGAACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGGAGCaaa                 <  6:422389/139‑1 (MQ=255)                                                                                                                       ttCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGGAGCa                   <  3:106820/137‑1 (MQ=255)                                                                                                                       ttCATTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGGAGCa                   <  6:122145/137‑1 (MQ=255)                                                                                                                       tgaaTTCTTTTTTGATTCATTTGGATGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGTGGAAGGAGCa                   <  4:63659/134‑1 (MQ=255)                                                                                                                          aTTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCTCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAACGGGAAGGAGCAAAGct              >  6:327305/1‑139 (MQ=255)                                                                                                                          aTTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCAAATGTCTCTCAAAGGGGAAGGAGCAACGct              >  8:110603/1‑139 (MQ=255)                                                                                                                          aTTCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCGTTTTGATTCCAATGTGTCTGAAAGGGGAATGAGCAAAGcg              >  7:400169/1‑138 (MQ=255)                                                                                                                            tCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGGAGCAAAGcttt            >  8:85584/1‑137 (MQ=255)                                                                                                                            tCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGGAGCAAAGcttt            >  6:179824/1‑137 (MQ=255)                                                                                                                            tCCTTTTTGATTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTAAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCGTTTTAAATCCAAAGTCTCTCAAAGGGGAAGGAGCAAAGcttt            >  2:207630/1‑137 (MQ=255)                                                                                                                              atttttGTTTCATTTGGCTGATCAAAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGGAGCAAAGCtttt           <  8:400169/137‑1 (MQ=255)                                                                                                                                     aTTCATTTGGCCGAGAAAAAAAGGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGGAGCAAAGCTTTTTACCatg    <  1:207630/138‑1 (MQ=255)                                                                                                                                     aTTCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGGAGCAAAGCTTTTTACCatg    <  5:176911/138‑1 (MQ=255)                                                                                                                                      ttCATTTGGCAGAGCACAAAATGGAGCCGCCGGCTTCCGAATTGTTTTTCAGAGGAATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTCAAAGGGGAAGGAGCAAAGCTTTTTACCatgat  >  6:33843/1‑139 (MQ=255)                                                                                                                                           |                                                                                                                                      TCGCTGGCGAGACACCCTGTACCTGTGGATGTCAAGCTATGCCGGCAATTTGATCGGCGCCATTCTATTTGCCAT‑‑‑‑‑TCTGATCAGCGCGACAGGGCTTTTTGAGGAGGCTTCTGTTCATTCCTTTTTGATTCATCTGGCAGAGCACAAAATGGAGCCGCCCGCTTCCGAACTGTTTTTCAGAGGGATGCTGTGCAATTGGCTTGTGTGCCTCGCCTTTTTCATTCCAATGTCTCTTAAAGGGGAAGGGGCAAAGCTCTTTACCATGAT  >  CP006881/3723483‑3723749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑