| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 1,187,558 | G→T | G354V (GGT→GTT) M1M (GTG→TTG) † |
U712_05885 → U712_05890 → |
Oligopeptide transport ATP‑binding protein OppD Oligopeptide transport ATP‑binding protein OppF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,187,558 | 0 | G | T | 98.0% | 310.4 / NA | 100 | G354V (GGT→GTT) M1M (GTG→TTG) † | U712_05885 U712_05890 | Oligopeptide transport ATP‑binding protein OppD Oligopeptide transport ATP‑binding protein OppF |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base T (46/52); total (47/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGGTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAGGG > CP006881/1187421‑1187683 | tAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCGGACGCGGGAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGGt > 3:243956/1‑139 (MQ=255) tCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatgaa > 8:56066/1‑139 (MQ=255) tCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatgaa > 7:110955/1‑139 (MQ=255) tCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatgaa > 7:169133/1‑139 (MQ=255) tCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatgaa < 2:435785/139‑1 (MQ=255) tCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatgaa > 8:253323/1‑139 (MQ=255) tCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatgaa > 3:303906/1‑139 (MQ=255) tCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatgaa > 1:67252/1‑139 (MQ=255) tCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatgaa > 4:7461/1‑139 (MQ=255) tCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCCGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatgaa > 1:435785/1‑139 (MQ=255) aTTATGTAAAATCGTGGCTGCTTCATCCTGCCGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGATCATGCGTAAACTGGCAAACACGTTTGATCGACCTGTCTTAGTGCGAGACGTTGAATGATGTGCCTGaaa > 4:148112/1‑139 (MQ=255) aTTATGTAAAATCGTGGCTGCTTCATCCTGCCGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGaa > 8:366645/1‑138 (MQ=255) aTTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGCAGCGGTAAAAGCGAAAATCCGTAAACTGGCAAACACGTTTGAAAAACCGGGCTTATTGAGAGAAGTTGAAGGAATTGGCTGaa > 8:40062/1‑138 (MQ=255) aTTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAATCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGGTGAATGAATTGACTGaaa < 2:358692/139‑1 (MQ=255) aTTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGaa > 8:142643/1‑138 (MQ=255) aTTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGaa > 4:335622/1‑138 (MQ=255) aTTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGaa > 4:164225/1‑138 (MQ=255) aTTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGaa > 5:85500/1‑138 (MQ=255) aTTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGaa > 6:180233/1‑138 (MQ=255) aTTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGaa > 6:181993/1‑138 (MQ=255) aTTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGaa > 7:200561/1‑138 (MQ=255) aTGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGaaaaa < 1:179041/138‑1 (MQ=255) aaaTCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAAATGGCAAACAAGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTa > 2:212364/1‑139 (MQ=255) aaaTCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGGAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTa > 3:384046/1‑139 (MQ=255) aaaTCGAGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCTCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTTCTGATAGAAGTTGAATGAATTGACTGAAAAAATATTa > 6:295125/1‑139 (MQ=255) aaTCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatgaa < 3:99516/120‑1 (MQ=255) aaTCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatgaa > 4:99516/1‑120 (MQ=255) aTCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAg > 4:234674/1‑138 (MQ=255) tGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAAt > 1:65065/1‑138 (MQ=255) tGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCATAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAAt > 5:328390/1‑138 (MQ=255) gctgctTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCaa < 5:180233/139‑1 (MQ=255) gctTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACa > 5:370228/1‑139 (MQ=255) aCGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCaa < 3:341464/125‑1 (MQ=255) aCGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCaa > 4:341464/1‑125 (MQ=255) ccAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACttt > 8:50841/1‑139 (MQ=255) ccAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACttt > 8:292009/1‑139 (MQ=255) gTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACg < 7:50841/139‑1 (MQ=255) gagCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCaa < 2:272491/111‑1 (MQ=255) gagCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCaa > 1:272491/1‑111 (MQ=255) gagCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCg > 8:161658/1‑139 (MQ=255) gagCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTATCACGcc > 7:198847/1‑138 (MQ=255) agCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGGGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGcc > 4:208001/1‑137 (MQ=255) agCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACGTAAAAACTATTAGAAATCAAACATTTAAAACCGCACTTTGTCccgccgg > 2:324527/1‑138 (MQ=255) gcagccTGAAGCGTTAAAAGCGAAAATGCGTAAACTCGCAAACCAGTTTTAAAAACCTGTGTTTGTGAAAGATGTTTAATGAATTGACTGAAAAAATATTAGAAATCAAACATTTAAAACCGCAGTTTGGCACGCCGAg < 6:9394/136‑1 (MQ=255) ccgccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGaaaaa < 4:169201/94‑1 (MQ=255) ccgccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGaaaaa > 3:169201/1‑94 (MQ=255) ccTTAAGCGTTAAATGCCAAAATGCGTAAACTGGAAAACACGTTTGAAAAACGTGTCTTTGTGAGAGAAGTTTAATGAATTGACTGAAAAACTATTATAAATCAAACATTAAAAACAGCACTTTGTCACGCCGATGGGa < 2:116979/139‑1 (MQ=255) ccTTAAGCGGTAAAAGCGAAAATGCGTAAACTGGCTAACACGTTTGAAAAACCTGTCTTAGTGAGAGAATTTGATTGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACATCAATTTGTCACGCCGAGGGGa < 6:185142/139‑1 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGATAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa < 4:303906/139‑1 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTTAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa < 6:301594/139‑1 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAgggg > 2:318625/1‑138 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAgggg > 1:116979/1‑138 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAgggg > 8:398403/1‑138 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAgggg > 1:22562/1‑138 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa < 2:22562/139‑1 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa < 8:32932/139‑1 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa < 1:318625/139‑1 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa < 3:234674/139‑1 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa < 8:169133/139‑1 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa < 4:225661/139‑1 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa < 7:366645/139‑1 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa < 8:110955/139‑1 (MQ=255) ccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTATCACGCCGAGGGGa < 8:198847/139‑1 (MQ=255) aaGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACg < 7:253323/138‑1 (MQ=255) gCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGtt < 3:164225/139‑1 (MQ=255) gCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGtt < 7:161658/139‑1 (MQ=255) tAAAAGCGAAAATTCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGGCTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAgg < 7:40062/139‑1 (MQ=255) tAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAgg < 3:7461/139‑1 (MQ=255) tAAAAGCGAAAATGCGTAAACTGGCAAACACGTGTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAgg < 1:145583/139‑1 (MQ=255) aaaaGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAgg < 3:335622/138‑1 (MQ=255) aTGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCACACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAgatgat < 4:384046/139‑1 (MQ=255) cGTAATCTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACCTTTAAAAGAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTa < 8:278203/139‑1 (MQ=255) cGTAAACTGGCAACAACGTTTGAAAAACCTTGCTTAGTGATAGAAGTTGAATGAATTGACTGAAAAAATATTAGCAATCAAACATTTAAAACAGAACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTa < 4:243956/139‑1 (MQ=255) cTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCAttt < 6:85500/139‑1 (MQ=255) gaaatcacGTTTGAAAAACCTGTCTTAGTGAGATAAGTTTAATTAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGat < 6:370228/134‑1 (MQ=255) gCAAACACGTTTGAAAAACCTGTCTTAGTGGGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGat < 3:208001/139‑1 (MQ=255) gCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTTTTATAAATCAAACATTAAAAACAGCTCTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGat < 1:364836/139‑1 (MQ=255) gCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa > 6:203349/1‑106 (MQ=255) gCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa < 5:203349/106‑1 (MQ=255) gCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGat < 8:200561/139‑1 (MQ=255) gCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGat < 7:398403/139‑1 (MQ=255) gCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGat < 6:356656/139‑1 (MQ=255) cGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCtata < 5:305112/139‑1 (MQ=255) gTTTTAAAAACCTTTCTTAGTGAGATAAGTTTAATGAATTGACTTAAAAACTATTAGAAATCAAAATTTTAAAAAAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCtata < 2:85658/138‑1 (MQ=255) ttGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAg > 1:85658/1‑139 (MQ=255) ttGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAg > 3:268996/1‑139 (MQ=255) taaaCCTTTGTTAGTGAGAGAATTTTAATCAATTTACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCAGTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTTATATCTATAAAGGTGa < 6:328390/138‑1 (MQ=255) aaaaCCTGTCTTAGTTAGATAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGa < 1:388347/139‑1 (MQ=255) aaaaCCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGa < 1:126421/139‑1 (MQ=255) aaaaCCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGa < 7:142643/139‑1 (MQ=255) aaaaCCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGa < 3:132243/139‑1 (MQ=255) aaaaCCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGa < 7:56066/139‑1 (MQ=255) aaaaCCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGa < 5:181993/139‑1 (MQ=255) ccTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACAATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGCGGAACGGTTAAGGCTGAAGATGATTTATCAATAGATATCTATAAAGGTGAAACa > 3:343356/1‑139 (MQ=255) tCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGAttt > 8:363235/1‑107 (MQ=255) tCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGAttt < 7:363235/107‑1 (MQ=255) agaAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGa < 2:320415/69‑1 (MQ=255) agaAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGa > 1:320415/1‑69 (MQ=255) agaAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAggg > 3:235804/1‑131 (MQ=255) agaAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAggg < 4:235804/131‑1 (MQ=255) | TAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGGTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAGGG > CP006881/1187421‑1187683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |