| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,175,740 | C→T | Q108Q (CAG→CAA) | U712_10880 ← | putative glycosyltransferase ypjH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,175,740 | 0 | C | T | 97.8% | 419.4 / ‑2.0 | 137 | Q108Q (CAG→CAA) | U712_10880 | putative glycosyltransferase ypjH |
| Reads supporting (aligned to +/- strand): ref base C (2/1); new base T (76/58); total (78/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.29e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
GAGACAGCTGTCACCCTGTCTGACGCTTCAATGGCAAAACGGATAAGATCTTTTAGAGACGGGTCATAGCCTAACACCGTGATATCCGTGCCATGCAAAGTTGTCACAATGCCGATATTGCGTTTCAGCATCTGCTTTGCAAGATAGGCACAAACCGCATGCGGAAGAGCGTAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCTGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAAC > CP006881/2175609‑2175871 | ggccgTCACCCTGTCTGATGACTCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGc > 4:285620/5‑135 (MQ=255) gccgTCACCCTGTCTGATTAATCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGAt < 1:159009/136‑1 (MQ=255) tCACCCTGTCTGATGACTCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATAATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGc > 3:360391/1‑139 (MQ=255) cTGTCTGATGACTCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACGATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCaaa < 6:34512/139‑1 (MQ=255) gTCTGATGACTCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGcgca > 3:303043/1‑135 (MQ=255) gTCTGATGACTCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAAcg > 1:148021/1‑138 (MQ=255) gTCTGATGACTCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAAcg > 8:49513/1‑138 (MQ=255) gTCTGATGACTCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAAcg > 4:232293/1‑138 (MQ=255) gTCTGATGACTCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGAGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCTGCATTTGTTTTGCAAGATAGGCGCAAAct > 3:260355/1‑138 (MQ=255) tCTGACGCTTCAATGGCAAAACGGATAAGATCTTTTAGAGACGGGTCATAGCCTAACACCGTGATATCCGTGCCATGCAAAGTTGTCACAATGCCGATATTGCGTTTCAGCATCTGCTTTGCAAGATAGGCACAAACCg > 4:222864/1‑139 (MQ=255) atgactCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCaaa < 1:36629/127‑1 (MQ=255) tgactCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATg < 4:360391/134‑1 (MQ=255) gactCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCg > 3:344190/4‑139 (MQ=255) actCAATAGCAACACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCg < 1:206792/136‑1 (MQ=255) ctCAATAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCggg < 2:383494/138‑2 (MQ=255) aaTAGCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTACCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCggga < 5:194142/137‑3 (MQ=255) atagCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGagag < 7:224459/136‑1 (MQ=255) agCAAAACGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGATTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGca > 1:360047/2‑138 (MQ=255) aaaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt < 2:237318/139‑1 (MQ=255) aaCGGATCAGATCTTTTATAGACGGATCATAACCTAACACCGATATATCCGTGCCATGCAAAGTGGTAACAATGACGATATTGCTTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATa > 5:299705/1‑136 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCggg > 8:294935/1‑127 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt > 4:432641/1‑138 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt > 7:166068/1‑138 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt > 8:128314/1‑138 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt > 2:253654/1‑138 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt > 1:383257/1‑138 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt > 5:114408/1‑138 (MQ=255) ggATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGc < 7:84461/139‑1 (MQ=255) ggATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGc < 2:148021/139‑1 (MQ=255) gATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCa < 4:342289/139‑1 (MQ=255) atcaGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCAt > 2:83868/4‑139 (MQ=255) aTCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGAt > 6:372618/1‑138 (MQ=255) agtcGGATCATAACCTTATACAGTGATTTCCGTGCCATGAAAAGTGGTATCAATGCCGATATTTCGTTTCTGCATTTGTTTTGCTAGATTGGCGCAAACGGCATGGGGGAGAGCATAGTGAGCATGGATAATGTCTaaa < 6:299705/136‑1 (MQ=255) agaCGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTaaa < 8:166068/139‑1 (MQ=255) agaCGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTaaa < 2:383257/139‑1 (MQ=255) gaCGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAAt > 7:315704/1‑139 (MQ=255) ggatCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATtct > 4:172397/4‑139 (MQ=255) aaCACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAAcg < 6:95440/84‑2 (MQ=255) acacCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCa < 1:261973/86‑1 (MQ=255) cacCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCAcc > 8:317451/1‑139 (MQ=255) cagTGATATCCGTGCCATGCAAAGTCGTAACAATGCCGATATTGCGTTACACCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCt > 5:85406/3‑138 (MQ=255) cGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCt > 3:47744/1‑137 (MQ=255) gTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAg > 5:222432/1‑139 (MQ=255) tGATATCCGTGCCATGCAAAGTTGTCACAATGCCGATATTGCGTTTCAGCATCTGCTTTGCAAGATAGGCACAAACCGCATGCGGAAGAGCGTAGTGAGCATGGATAATGTCTaaa < 8:130644/116‑1 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATg < 3:35197/82‑1 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATg > 4:35197/1‑82 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATg < 7:161356/82‑1 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCggg < 2:220836/86‑2 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATa < 6:241042/94‑1 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTc > 4:219993/1‑136 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTc < 3:219993/136‑1 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGc > 5:358486/1‑139 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGc > 2:166437/1‑139 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGc > 6:191855/1‑139 (MQ=255) tGATATCCGTGCCATGCAAAGTGGAAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGTCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGc > 3:74222/1‑139 (MQ=255) tGATATCCGTGCCAGTCAAAGTGGTCACAATGCCGATATTGCGTTTCAGCATTTCTTATGCAAGATAGGCGCACACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAg > 6:139803/1‑138 (MQ=255) gATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGc > 4:445578/1‑138 (MQ=255) ccGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATa > 7:162062/1‑101 (MQ=255) ccGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATa < 8:162062/101‑1 (MQ=255) cGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttg > 6:166377/1‑139 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCggg < 7:93256/78‑2 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCgg < 7:254557/77‑1 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCgg > 8:254557/1‑77 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATaa > 3:246362/1‑100 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgc > 7:83942/1‑139 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgc > 4:170079/1‑139 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgc > 3:41501/1‑139 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgc > 6:406877/1‑139 (MQ=255) gTGCCATGCAAAGTCGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgc > 7:399249/1‑139 (MQ=255) gCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgctt > 8:372588/1‑139 (MQ=255) gCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgctt > 1:250140/1‑139 (MQ=255) aTGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGcc < 5:406877/139‑1 (MQ=255) tGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGcc > 5:5632/1‑138 (MQ=255) tGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCa < 3:61024/139‑1 (MQ=255) tGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCa < 8:120120/139‑1 (MQ=255) gtaacaATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCaaa < 4:47744/135‑1 (MQ=255) gtaacaATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAAt < 3:106976/136‑1 (MQ=255) taacaATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAAt > 2:172539/3‑138 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCaaa > 7:337028/1‑44 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCaaa < 8:337028/44‑1 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATa > 7:298755/1‑76 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAACTTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCACATCATACg > 5:259575/1‑137 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACg > 2:59406/1‑137 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACg > 7:269591/1‑137 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACg > 8:273083/1‑137 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACg > 5:68318/1‑137 (MQ=255) gATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 1:63089/139‑1 (MQ=255) gATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 1:253654/139‑1 (MQ=255) gATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 8:83942/139‑1 (MQ=255) gATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 2:278067/139‑1 (MQ=255) gATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 7:4841/139‑1 (MQ=255) gATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 3:232293/139‑1 (MQ=255) gATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 3:298207/139‑1 (MQ=255) gCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACtt < 3:276421/138‑1 (MQ=255) gCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACtt > 5:394898/1‑138 (MQ=255) gTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTaa > 1:428759/1‑138 (MQ=255) tCAGCATTTGTTTTGCAAGAGAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTaaaaa < 4:260355/138‑1 (MQ=255) cAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTaaaaa > 7:10219/1‑137 (MQ=255) cAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAAc < 2:277887/138‑1 (MQ=255) cAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAAc < 3:172397/138‑1 (MQ=255) | GAGACAGCTGTCACCCTGTCTGACGCTTCAATGGCAAAACGGATAAGATCTTTTAGAGACGGGTCATAGCCTAACACCGTGATATCCGTGCCATGCAAAGTTGTCACAATGCCGATATTGCGTTTCAGCATCTGCTTTGCAAGATAGGCACAAACCGCATGCGGAAGAGCGTAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCTGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAAC > CP006881/2175609‑2175871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |