| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,175,779 | G→A | Y95Y (TAC→TAT) | U712_10880 ← | putative glycosyltransferase ypjH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,175,779 | 0 | G | A | 97.5% | 367.1 / ‑1.4 | 122 | Y95Y (TAC→TAT) | U712_10880 | putative glycosyltransferase ypjH |
| Reads supporting (aligned to +/- strand): ref base G (1/2); new base A (62/57); total (63/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.04e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
AAACGGATAAGATCTTTTAGAGACGGGTCATAGCCTAACACCGTGATATCCGTGCCATGCAAAGTTGTCACAATGCCGATATTGCGTTTCAGCATCTGCTTTGCAAGATAGGCACAAACCGCATGCGGAAGAGCGTAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCTGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCGTATTGATTAACCTCAACTTCATGAAAATGAATATTGGG > CP006881/2175645‑2175913 | aaaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt < 2:237318/139‑1 (MQ=255) aaCGGATCAGATCTTTTATAGACGGATCATAACCTAACACCGATATATCCGTGCCATGCAAAGTGGTAACAATGACGATATTGCTTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATa > 5:299705/1‑136 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt > 5:114408/1‑138 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt > 4:196307/1‑138 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt > 2:253654/1‑138 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt > 7:166068/1‑138 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt > 8:128314/1‑138 (MQ=255) aaCGGATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGt > 1:383257/1‑138 (MQ=255) ggATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGc < 7:84461/139‑1 (MQ=255) ggATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGc < 2:148021/139‑1 (MQ=255) gATCAGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCa < 4:342289/139‑1 (MQ=255) atcaGATCTTTTAGAGACGGATCATAACCTAACCCCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATCGGCGCAAACGGCATCCGGGAGAGCATAGTGAGCAt > 5:54904/4‑139 (MQ=255) atcaGATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCAt > 2:83868/4‑139 (MQ=255) gATCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGAt < 6:172954/139‑1 (MQ=255) aTCTTTTAGAGACGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGAt > 6:372618/1‑138 (MQ=255) agtcGGATCATAACCTTATACAGTGATTTCCGTGCCATGAAAAGTGGTATCAATGCCGATATTTCGTTTCTGCATTTGTTTTGCTAGATTGGCGCAAACGGCATGGGGGAGAGCATAGTGAGCATGGATAATGTCTaaa < 6:299705/136‑1 (MQ=255) agaCGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTaaa < 8:166068/139‑1 (MQ=255) agaCGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTaaa < 2:383257/139‑1 (MQ=255) gaCGGATCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAAt > 7:315704/1‑139 (MQ=255) ggatCATAACCTAACACCGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATtct > 4:172397/4‑139 (MQ=255) cagTGATATCCGTGCCATGCAAAGTCGTAACAATGCCGATATTGCGTTACACCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCt > 5:85406/3‑138 (MQ=255) cGTGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCt > 3:47744/1‑137 (MQ=255) tGATATCCGTGCCATGCAAAGTTGTCACAATGACGATATTGCGTTTCAGCATCTGCTTTGCAAGATAGGCACAAACCGCATGCGGAAGAGCGTAGTGAGCATGGATAATGTCTaaa > 7:130644/1‑116 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATa > 5:241042/1‑94 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATa < 6:241042/94‑1 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTc > 4:219993/1‑136 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTc < 3:219993/136‑1 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGc > 6:191855/1‑139 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGc > 2:166437/1‑139 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGc > 5:358486/1‑139 (MQ=255) tGATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGc > 1:277887/1‑139 (MQ=255) tGATATCCGTGCCATGCAAAGTGGAAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGTCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGc > 3:74222/1‑139 (MQ=255) tGATATCCGTGCCAGTCAAAGTGGTCACAATGCCGATATTGCGTTTCAGCATTTCTTATGCAAGATAGGCGCACACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAg > 6:139803/1‑138 (MQ=255) gATATCCGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGc > 4:445578/1‑138 (MQ=255) ccGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATa > 7:162062/1‑101 (MQ=255) ccGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATa < 8:162062/101‑1 (MQ=255) cGTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttg > 6:166377/1‑139 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATaa > 3:246362/1‑100 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATaa < 4:246362/100‑1 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgc > 2:63089/1‑139 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgc > 3:41501/1‑139 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgc < 3:285620/139‑1 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgc > 6:406877/1‑139 (MQ=255) gTGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgc > 7:83942/1‑139 (MQ=255) gTGCCATGCAAAGTCGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgc > 7:399249/1‑139 (MQ=255) tGCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgct > 6:422221/1‑139 (MQ=255) gCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgctt > 1:250140/1‑139 (MQ=255) gCCATGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTttgctt > 8:372588/1‑139 (MQ=255) aTGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGcc < 5:406877/139‑1 (MQ=255) tGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGcc > 5:5632/1‑138 (MQ=255) tGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGcc > 4:64732/1‑138 (MQ=255) tGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCa < 3:61024/139‑1 (MQ=255) tGCAAAGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCa < 8:120120/139‑1 (MQ=255) aGTGGTAACAATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTc < 4:41501/139‑1 (MQ=255) gtaacaATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCaaa < 4:47744/135‑1 (MQ=255) gtaacaATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAAt < 3:106976/136‑1 (MQ=255) taacaATGCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAAt > 2:172539/3‑138 (MQ=255) aTGCCGATATTGCTTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGGTTGCCAATGTCAAATCATACg < 8:17893/139‑1 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATa > 7:298755/1‑76 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATa < 8:298755/76‑1 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAACTTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCACATCATACg > 5:259575/1‑137 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACg > 7:269591/1‑137 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACg > 8:273083/1‑137 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACg > 2:59406/1‑137 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACg > 8:4841/1‑137 (MQ=255) gCCGATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACg > 3:350994/1‑137 (MQ=255) gATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 3:232293/139‑1 (MQ=255) gATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 3:298207/139‑1 (MQ=255) gATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 1:253654/139‑1 (MQ=255) gATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 1:63089/139‑1 (MQ=255) gATATTGCGTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 2:278067/139‑1 (MQ=255) gTTTCAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTaa > 1:428759/1‑138 (MQ=255) cAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAAc < 3:172397/138‑1 (MQ=255) cAGCATTTGTTTTGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAAc < 2:277887/138‑1 (MQ=255) tttgttttGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACCGCATa > 8:318042/6‑139 (MQ=255) tttgttttGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATa < 5:372618/134‑1 (MQ=255) ttttGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGa < 8:354709/138‑1 (MQ=255) ttttGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGa < 7:273083/138‑1 (MQ=255) ttGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGAt > 2:194141/1‑138 (MQ=255) tGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGAtt < 1:59406/138‑1 (MQ=255) tGCAAGATAGGCGCAAACGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGAtt < 1:83868/138‑1 (MQ=255) aaCGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGa < 2:150684/139‑1 (MQ=255) aaCGGCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATACTCCCGTTCCGCCACCTCACCGATATTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATg > 4:405671/1‑138 (MQ=255) gCATGCTGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAAt < 3:64732/139‑1 (MQ=255) gCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGTTTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACGTCAACTTCATGAAAAt < 7:128314/139‑1 (MQ=255) gCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAAt < 6:114408/139‑1 (MQ=255) gCATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAAt < 6:222432/139‑1 (MQ=255) cATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGcc < 5:397044/74‑1 (MQ=255) cATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGcc > 6:397044/1‑74 (MQ=255) cATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACggagga < 5:179628/95‑1 (MQ=255) cATGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAAt > 4:179762/1‑138 (MQ=255) cATGCGGAAGAGCGTAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCTGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCGTATTGATTAACCTCAACTTCATGAAAATg < 3:222864/139‑1 (MQ=255) aTGCGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGa < 6:394898/139‑1 (MQ=255) cGGGAGAGCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGAata < 1:172539/139‑1 (MQ=255) gggagagCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGAatat > 1:318844/4‑139 (MQ=255) ggagagCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGAATAtt < 4:350994/137‑1 (MQ=255) agagCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGAATATTgg > 2:34770/1‑139 (MQ=255) gagCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGAATATTggg < 2:318844/139‑1 (MQ=255) gagCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGAATATTggg < 2:324867/139‑1 (MQ=255) gagCATAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCCGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGAATATTggg < 3:432641/139‑1 (MQ=255) | AAACGGATAAGATCTTTTAGAGACGGGTCATAGCCTAACACCGTGATATCCGTGCCATGCAAAGTTGTCACAATGCCGATATTGCGTTTCAGCATCTGCTTTGCAAGATAGGCACAAACCGCATGCGGAAGAGCGTAGTGAGCATGGATAATGTCTAAATTCTCCCGTTCTGCCACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCGTATTGATTAACCTCAACTTCATGAAAATGAATATTGGG > CP006881/2175645‑2175913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |