BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,175,950	A→G	I38I (ATT→ATC)	U712_10880 ←	putative glycosyltransferase ypjH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,175,950	0	A	G	100.0%	359.3 / NA	109	I38I (ATT→ATC)	U712_10880	putative glycosyltransferase ypjH
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (62/47); total (62/47)

Only 100 of 109 total aligned reads displayed.

CACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCGTATTGATTAACCTCAACTTCATGAAAATGAATATTGGGGTGATATGTATTTAGTCTAAACGGAATGCTTGACGTAATAAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCGAGTTCTGTCGCAATGATACCTGAGCCTCCGACGCTCGGATAGCATGTGATCCCTATTTTTAGTTTTTTCATTGTTCGCCCCCAAGCACA  >  CP006881/2175818‑2176081

       gCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGAttt                                                                                                                        >  5:424419/1‑139 (MQ=255)

         gATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAATCGGAATGCTTGATGTGATGAAATGGATTTCa                                                                                                                      <  4:344190/139‑1 (MQ=255)

                              aTCAGACGGAGGCTACTTAAAAACAGCATAGTGATTCACCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAcctgc                                                                                                 <  8:351972/139‑1 (MQ=255)

                                    cGGAGGATACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTccc                                                                                            <  4:53769/138‑1 (MQ=255)

                                        ggaTACTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGtt                                                                                       <  2:360047/139‑1 (MQ=255)

                                            aCTTAAAAACAGCATATTGATTAACCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGt                                                                                   >  7:411443/1‑139 (MQ=255)

                                                aaaaaCAGCATATTGATTAACCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGc                                                                                <  5:166377/138‑1 (MQ=255)

                                                  aaaCAGCATATTGATTAAACTCAACATCATGAAAATGAATATTGGGATGATATGTATTCAGTCTACACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAAt                                                                             <  8:399249/139‑1 (MQ=255)

                                                   aaCAGCATATTGATTAACCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAAt                                                                             >  6:296010/1‑138 (MQ=255)

                                                      aGCATATTGATTAACCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATa                                                                         >  2:131492/1‑139 (MQ=255)

                                                                ttAACCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTc                                                               >  8:208347/1‑139 (MQ=255)

                                                                  aaCCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATAcc                                                                       <  4:195381/129‑1 (MQ=255)

                                                                  aaCCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATAcc                                                                       >  3:195381/1‑129 (MQ=255)

                                                                  aaCCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCGTCACCAGTTCTGTCGCAATGATACGTGAGCCTcc                                                              >  2:376535/1‑138 (MQ=255)

                                                                   aCCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTccaa                                                            >  5:111349/1‑137 (MQ=255)

                                                                   aCCTCAACTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTccaa                                                            <  6:111349/139‑3 (MQ=255)

                                                                        aaCTTCATGTAAATGAATATGGGGATGATATGTATTCAGTCTAAACGGATTTCTAGATGTGATGAAATGGAGTTCATGTCCCTTTTCAGGAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCt                                                        <  5:139803/138‑1 (MQ=255)

                                                                        aaCTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCt                                                        <  3:298187/138‑1 (MQ=255)

                                                                        aaCTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCt                                                        <  8:411443/138‑1 (MQ=255)

                                                                         aCTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCg                                                      <  3:170079/139‑1 (MQ=255)

                                                                         aCTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTCCATGTCCCTTTTCTGCAAGATGCTGCCCCAGTTCTGTCGCATTGATACCTGAGACGCCCAGGCTCg                                                      >  7:412410/1‑139 (MQ=255)

                                                                             cctGAAAATGAATAATGGGCAGATAAGTAGTCAGGCAAAACGGAATGCTTGCTGGGATGACATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa                                                    <  6:259575/135‑1 (MQ=255)

                                                                             cATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa                                                    >  1:349498/1‑137 (MQ=255)

                                                                                  aaaTGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCAt                                              <  5:191855/138‑1 (MQ=255)

                                                                                    aTGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGa                                                                    >  2:210995/1‑114 (MQ=255)

                                                                                    aTGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGa                                                                    <  1:210995/114‑1 (MQ=255)

                                                                                       aaTATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGAtt                                        <  6:424419/139‑2 (MQ=255)

                                                                                            tGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTAt                                   >  2:238093/1‑139 (MQ=255)

                                                                                              ggatGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTccaa                                                            >  4:118860/4‑110 (MQ=255)

                                                                                              ggatGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTccaa                                                            <  3:118860/109‑3 (MQ=255)

                                                                                              ggatGATATGTATTCAGTCTAAACGGAATGCTTGATCTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCACCGCTCGGATAGCATGTGATTCCTAttt                                 >  2:397485/4‑139 (MQ=255)

                                                                                                 tGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTAtttt                                >  6:228739/1‑137 (MQ=255)

                                                                                                   atatGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCaa                                                                                                      <  2:317115/65‑1 (MQ=255)

                                                                                                   atatGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCaa                                                                                                      >  1:317115/1‑65 (MQ=255)

                                                                                                   atatGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGa                                                                    <  5:269930/99‑1 (MQ=255)

                                                                                                   atatGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGa                                                                    >  6:269930/1‑99 (MQ=255)

                                                                                                   atatGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGa                                          >  1:396290/1‑125 (MQ=255)

                                                                                                        tATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTccc                                                                                            <  8:286528/70‑1 (MQ=255)

                                                                                                        tATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTccc                                                                                            >  7:286528/1‑70 (MQ=255)

                                                                                                        tATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGc                                                                                <  1:121542/82‑1 (MQ=255)

                                                                                                        tATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGc                                                                                >  2:121542/1‑82 (MQ=255)

                                                                                                        tATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGttttct                       <  4:284683/139‑3 (MQ=255)

                                                                                                        tATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGttttct                       >  2:363775/1‑137 (MQ=255)

                                                                                                          ttcaGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCCTGTCCC‑TTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAAGGCTACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTATCAt                    >  8:47701/4‑139 (MQ=255)

                                                                                                          ttcaGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa                     >  4:176184/4‑139 (MQ=255)

                                                                                                          ttcaGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa                     >  4:39135/4‑139 (MQ=255)

                                                                                                          ttcaGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa                     >  8:121382/4‑139 (MQ=255)

                                                                                                          ttcaGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGATCTGTCGCAATGATACCTCAGCCTCCACCGCGCGCATAGCATGTGATTCCTATTTTTAGTTTTCTCa                     >  6:244789/4‑139 (MQ=255)

                                                                                                            caGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa                                                    >  3:96111/2‑106 (MQ=255)

                                                                                                            caGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa                                                    <  4:96111/105‑1 (MQ=255)

                                                                                                             aGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTg                  >  7:82534/1‑139 (MQ=255)

                                                                                                             aGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTAATTg                  >  3:112684/1‑139 (MQ=255)

                                                                                                              gTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGt                 >  3:218775/1‑139 (MQ=255)

                                                                                                              gTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGt                 >  5:224960/1‑139 (MQ=255)

                                                                                                               tCTAATCGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                <  7:208347/139‑1 (MQ=255)

                                                                                                               tCTAAACGGATTGCTTGATGTGATGAAATGGATTACATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTGTGTCGCATTGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTGTCATTGtt                >  5:286573/1‑139 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATTAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGt                 >  1:313793/1‑138 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAgctgc                                                                                                 <  3:198353/58‑1 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAgctgc                                                                                                 >  4:198353/1‑58 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCt                                                        <  5:228021/99‑1 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCt                                                        >  6:228021/1‑99 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa                     >  2:191972/1‑134 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa                     <  1:191972/134‑1 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                >  7:260149/1‑139 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                >  6:358968/1‑139 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                >  8:247095/1‑139 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                >  7:265035/1‑139 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                <  8:82534/139‑1 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                <  1:131492/139‑1 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                >  5:10289/1‑139 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                <  1:293838/139‑1 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                >  4:287601/1‑139 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                >  2:293838/1‑139 (MQ=255)

                                                                                                               tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                >  3:313223/1‑139 (MQ=255)

                                                                                                               gctattcGGATTGCTTGATGTGATGAAATGGAGTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGACGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGGGATTCCTATTTTTAGTTTTCTCATTGtt                <  3:405671/133‑1 (MQ=255)

                                                                                                               gcTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt                <  5:296010/138‑1 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGa                                                                           >  5:360670/1‑70 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGa                                                                           <  6:360670/70‑1 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCt                                                        >  4:202064/1‑89 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCt                                                        <  3:202064/89‑1 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa                                                    <  3:259385/93‑1 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa                                                    >  8:23960/1‑93 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa                                                    >  6:173433/1‑93 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAg                             <  3:341919/116‑1 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAg                             >  4:341919/1‑116 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg      >  2:168359/1‑139 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg      >  5:45133/1‑139 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg      >  8:74590/1‑139 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg      <  1:168359/139‑1 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg      >  8:423849/1‑139 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg      <  1:363775/139‑1 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg      >  7:311277/1‑139 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg      <  7:209699/139‑1 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg      >  3:242666/1‑139 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg      >  3:256708/1‑139 (MQ=255)

                                                                                                                         aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg      >  7:305370/1‑139 (MQ=255)

                                                                                                                          tGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg      <  1:397485/138‑1 (MQ=255)

                                                                                                                            cTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGca    <  3:97098/138‑1 (MQ=255)

                                                                                                                            cTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGca    <  8:10219/138‑1 (MQ=255)

                                                                                                                             ttGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGcaca  >  8:77969/1‑139 (MQ=255)

CACCTCAGCGATTTTGCTTGCCAATGTCAAATCATACGGAGGATACTTAAAAACAGCGTATTGATTAACCTCAACTTCATGAAAATGAATATTGGGGTGATATGTATTTAGTCTAAACGGAATGCTTGACGTAATAAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCGAGTTCTGTCGCAATGATACCTGAGCCTCCGACGCTCGGATAGCATGTGATCCCTATTTTTAGTTTTTTCATTGTTCGCCCCCAAGCACA  >  CP006881/2175818‑2176081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`