| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,176,022 | G→A | V14V (GTC→GTT) | U712_10880 ← | putative glycosyltransferase ypjH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,176,022 | 0 | G | A | 99.2% | 393.0 / NA | 130 | V14V (GTC→GTT) | U712_10880 | putative glycosyltransferase ypjH |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (66/63); minor base C (1/0); total (67/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 130 total aligned reads displayed.
AACTTCATGAAAATGAATATTGGGGTGATATGTATTTAGTCTAAACGGAATGCTTGACGTAATAAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCGAGTTCTGTCGCAATGATACCTGAGCCTCCGACGCTCGGATAGCATGTGATCCCTATTTTTAGTTTTTTCATTGTTCGCCCCCAAGCACATCATGATCGAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACACCCGCTTCTTTACCGTA > CP006881/2175890‑2176152 | aaCTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCt < 8:411443/138‑1 (MQ=255) aCTTCATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTCCATGTCCCTTTTCTGCAAGATGCTGCCCCAGTTCTGTCGCATTGATACCTGAGACGCCCAGGCTCg > 7:412410/1‑139 (MQ=255) cctGAAAATGAATAATGGGCAGATAAGTAGTCAGGCAAAACGGAATGCTTGCTGGGATGACATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa < 6:259575/135‑1 (MQ=255) cATGAAAATGAATATTGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa > 1:349498/1‑137 (MQ=255) tGGGATGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTAt > 2:238093/1‑139 (MQ=255) ggatGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTAttt > 8:209699/4‑139 (MQ=255) ggatGATATGTATTCAGTCTAAACGGAATGCTTGATCTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCACCGCTCGGATAGCATGTGATTCCTAttt > 2:397485/4‑139 (MQ=255) tGATATGTATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTAtttt > 6:228739/1‑137 (MQ=255) tATTCAGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGttttct > 2:363775/1‑137 (MQ=255) ttcaGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCCTGTCCC‑TTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAAGGCTACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTATCAt > 8:47701/4‑139 (MQ=255) ttcaGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa > 4:176184/4‑139 (MQ=255) caGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa < 4:96111/105‑1 (MQ=255) aGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTg > 7:82534/1‑139 (MQ=255) aGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTAATTg > 3:112684/1‑139 (MQ=255) gTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGt > 5:224960/1‑139 (MQ=255) gTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGt > 3:218775/1‑139 (MQ=255) tCTAATCGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt < 7:208347/139‑1 (MQ=255) tCTAAACGGAATGCTTGATGTGATTAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGt > 1:313793/1‑138 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCt > 6:228021/1‑99 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCt < 5:228021/99‑1 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa > 2:191972/1‑134 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa < 1:191972/134‑1 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 3:313223/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 4:287601/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt < 8:82534/139‑1 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 5:10289/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 6:358968/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 7:265035/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 8:247095/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt < 1:131492/139‑1 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 2:293838/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt < 1:293838/139‑1 (MQ=255) gctattcGGATTGCTTGATGTGATGAAATGGAGTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGACGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGGGATTCCTATTTTTAGTTTTCTCATTGtt < 3:405671/133‑1 (MQ=255) gcTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt < 5:296010/138‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCt < 3:202064/89‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa < 7:23960/93‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa < 5:173433/93‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa < 3:259385/93‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGa > 4:259385/1‑93 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAg < 3:341919/116‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAg > 4:341919/1‑116 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 7:311277/1‑139 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 5:45133/1‑139 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg < 7:209699/139‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 7:305370/1‑139 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 3:256708/1‑139 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 8:74590/1‑139 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg < 1:168359/139‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg < 1:363775/139‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 8:423849/1‑139 (MQ=255) tGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg < 1:397485/138‑1 (MQ=255) cTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGca < 8:10219/138‑1 (MQ=255) cTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGca < 3:97098/138‑1 (MQ=255) ttGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGcaca > 8:77969/1‑139 (MQ=255) gtgatgaaaTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCAcatcat > 8:102586/7‑138 (MQ=255) gtgatgaaaTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCAcatcat > 2:326675/7‑138 (MQ=255) atgaaaTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGAt > 1:135063/4‑138 (MQ=255) atgaaaTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGAt > 6:140909/4‑138 (MQ=255) atgaaaTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGAt > 4:13954/4‑138 (MQ=255) atgaaaTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGAt < 3:176184/135‑1 (MQ=255) aTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCACGCACATCATGATCAag > 6:243109/1‑137 (MQ=255) tGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAagcat < 6:45133/139‑1 (MQ=255) tttCATGTCCCTTTTCACCAAGCAGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCGCGGATAGCATGTCATTCCTATTTTTAGTTTTCTCATAGTTCGCACCCAAGAACATCATCATCAagcatcag > 1:68803/1‑138 (MQ=255) cccTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGttt > 7:349834/1‑139 (MQ=255) cccTTTACAGCAAGCTGCTTCCACAGTTCTGTCGCAATGATACCTGAGCATCCAACGCTCGGATAGCATCTGATTCCTATTTTTAGATGTCTCATAGTTCGCCCCCAAGCACATCAGTATCAACCAACTGCATCCGt > 6:440814/1‑137 (MQ=255) agctagctGCTTCCCCAGTTCTGTAGAAATGATACCTGATCCTACAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGATCGCCCCCAAGCACATCATGATCAAGCATCAGCATACGTTTGGAAAAGa < 2:68803/139‑1 (MQ=255) aGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGa < 2:135063/139‑1 (MQ=255) gCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGaa < 3:39135/139‑1 (MQ=255) ggtgctTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTAGCCCCCAACCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAAc < 1:376535/135‑1 (MQ=255) gctgctTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCt > 6:273923/1‑139 (MQ=255) gctgctTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCt < 5:273923/139‑1 (MQ=255) gctgctTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCt < 1:294207/139‑1 (MQ=255) gctgctTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCt < 3:13954/139‑1 (MQ=255) ctgctTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCtt < 7:102586/139‑1 (MQ=255) ctgctTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCt < 5:358968/138‑1 (MQ=255) ccccAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa < 8:349834/138‑1 (MQ=255) ccccAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa < 3:287601/138‑1 (MQ=255) ccccAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa < 8:265035/138‑1 (MQ=255) ccccAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa < 8:242705/138‑1 (MQ=255) ccccAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa < 4:218775/138‑1 (MQ=255) aGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa > 7:35847/1‑134 (MQ=255) gTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCCGCATCCGTTTGGAAAAGAAACCTGCGGCATACTcc > 8:239186/1‑139 (MQ=255) gTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTcc < 7:121382/139‑1 (MQ=255) tctcAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGcc < 4:313223/135‑1 (MQ=255) tCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGccc > 5:17678/1‑139 (MQ=255) tCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGccc > 7:76588/1‑139 (MQ=255) tCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGccc > 1:6418/1‑139 (MQ=255) tCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGcc < 5:140909/138‑1 (MQ=255) tCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGcc < 5:228739/138‑1 (MQ=255) cGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCg < 8:123714/139‑1 (MQ=255) gCAATGATACCTGAGCCTCCAACGCTCGGATAGCTTGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGTAAAAGAAACCTGCGGCATAGTCCACGCCCGc < 4:242666/139‑1 (MQ=255) aTGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGcttc > 4:359904/1‑139 (MQ=255) tACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTa < 7:74590/139‑1 (MQ=255) aCCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTAc > 5:395669/1‑139 (MQ=255) gAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATcc > 5:139341/1‑90 (MQ=255) gAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATcc < 6:139341/90‑1 (MQ=255) gAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGt > 2:395611/1‑138 (MQ=255) aGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTa < 7:66251/138‑1 (MQ=255) aGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTa < 6:224960/138‑1 (MQ=255) tCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCCTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGcttctt > 8:1042/1‑127 (MQ=255) | AACTTCATGAAAATGAATATTGGGGTGATATGTATTTAGTCTAAACGGAATGCTTGACGTAATAAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCGAGTTCTGTCGCAATGATACCTGAGCCTCCGACGCTCGGATAGCATGTGATCCCTATTTTTAGTTTTTTCATTGTTCGCCCCCAAGCACATCATGATCGAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACACCCGCTTCTTTACCGTA > CP006881/2175890‑2176152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |