| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,176,059 | T→C | K2R (AAA→AGA) | U712_10880 ← | putative glycosyltransferase ypjH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,176,059 | 0 | T | C | 99.2% | 391.0 / NA | 122 | K2R (AAA→AGA) | U712_10880 | putative glycosyltransferase ypjH |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (59/61); minor base A (1/0); total (61/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 122 total aligned reads displayed.
TTTAGTCTAAACGGAATGCTTGACGTAATAAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCGAGTTCTGTCGCAATGATACCTGAGCCTCCGACGCTCGGATAGCATGTGATCCCTATTTTTAGTTTTTTCATTGTTCGCCCCCAAGCACATCATGATCGAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACACCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAATGATCTCGATATAGCCA > CP006881/2175924‑2176189 | ttcaGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa > 4:39135/4‑139 (MQ=255)ttcaGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa > 8:121382/4‑139 (MQ=255)ttcaGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa > 4:176184/4‑139 (MQ=255)ttcaGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGATCTGTCGCAATGATACCTCAGCCTCCACCGCGCGCATAGCATGTGATTCCTATTTTTAGTTTTCTCa > 6:244789/4‑139 (MQ=255) aGTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTg > 7:82534/1‑139 (MQ=255) gTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGt > 3:218775/1‑139 (MQ=255) gTCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGt > 5:224960/1‑139 (MQ=255) tCTAATCGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt < 7:208347/139‑1 (MQ=255) tCTAAACGGATTGCTTGATGTGATGAAATGGATTACATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTGTGTCGCATTGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTGTCATTGtt > 5:286573/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATTAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGt > 1:313793/1‑138 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa < 1:191972/134‑1 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCa > 2:191972/1‑134 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 4:287601/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 6:358968/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 3:313223/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 7:260149/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 7:265035/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt < 1:131492/139‑1 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 2:293838/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt < 8:82534/139‑1 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt > 8:247095/1‑139 (MQ=255) tCTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt < 1:293838/139‑1 (MQ=255) gctattcGGATTGCTTGATGTGATGAAATGGAGTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGACGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGGGATTCCTATTTTTAGTTTTCTCATTGtt < 3:405671/133‑1 (MQ=255) gcTAAACGGAATGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGtt < 5:296010/138‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg < 1:363775/139‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg < 1:168359/139‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 5:45133/1‑139 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 8:74590/1‑139 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 3:256708/1‑139 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 3:242666/1‑139 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 8:423849/1‑139 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg < 7:209699/139‑1 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 2:168359/1‑139 (MQ=255) aTGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg > 7:305370/1‑139 (MQ=255) tGCTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAg < 1:397485/138‑1 (MQ=255) cTTGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGca < 8:10219/138‑1 (MQ=255) ttGATGTGATGAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGcaca > 8:77969/1‑139 (MQ=255) gtgatgaaaTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCAcatcat > 8:66251/7‑138 (MQ=255) atgaaaTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGAt > 6:140909/4‑138 (MQ=255) atgaaaTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGAt > 1:135063/4‑138 (MQ=255) atgaaaTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGAt < 3:176184/135‑1 (MQ=255) atgaaaTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGAt > 4:13954/4‑138 (MQ=255) aTGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCACGCACATCATGATCAag > 6:243109/1‑137 (MQ=255) tGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAagcat < 6:45133/139‑1 (MQ=255) tttCATGTCCCTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACTTCATGATCAagcatcag > 7:48913/1‑138 (MQ=255) tttCATGTCCCTTTTCACCAAGCAGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCGCGGATAGCATGTCATTCCTATTTTTAGTTTTCTCATAGTTCGCACCCAAGAACATCATCATCAagcatcag > 1:68803/1‑138 (MQ=255) cccTTTTCAGCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGttt > 7:349834/1‑139 (MQ=255) cccTTTACAGCAAGCTGCTTCCACAGTTCTGTCGCAATGATACCTGAGCATCCAACGCTCGGATAGCATCTGATTCCTATTTTTAGATGTCTCATAGTTCGCCCCCAAGCACATCAGTATCAACCAACTGCATCCGt > 6:440814/1‑137 (MQ=255) ttCAGCAAGCTGCATCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGCTCAAGCATCAGCATCCGTTTGGa < 1:238093/137‑1 (MQ=255) agctagctGCTTCCCCAGTTCTGTAGAAATGATACCTGATCCTACAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGATCGCCCCCAAGCACATCATGATCAAGCATCAGCATACGTTTGGAAAAGa < 2:68803/139‑1 (MQ=255) gCAAGCTGCTTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGaa < 3:39135/139‑1 (MQ=255) gctgctTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCt < 3:13954/139‑1 (MQ=255) gctgctTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCt < 1:294207/139‑1 (MQ=255) gctgctTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCt < 5:273923/139‑1 (MQ=255) ctgctTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCtt < 7:102586/139‑1 (MQ=255) ctgctTCCCCAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCt < 5:358968/138‑1 (MQ=255) ccccAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa < 8:242705/138‑1 (MQ=255) ccccAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa < 7:84674/138‑1 (MQ=255) ccccAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa < 8:265035/138‑1 (MQ=255) ccccAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa < 8:349834/138‑1 (MQ=255) ccccAGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa < 4:218775/138‑1 (MQ=255) aGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa > 7:35847/1‑134 (MQ=255) aGTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa < 8:35847/134‑1 (MQ=255) gTTCTGTCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTcc < 7:121382/139‑1 (MQ=255) tctcAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGcc < 4:313223/135‑1 (MQ=255) tCGCAATGTTACCTGAGCCTCCAACTCTCGGATAGCATTTGATTCCTAATTTTAGTTTTCTCTTTGTTCGCCCCCAAGCACATCATGATCAAGCTTCTGCATCGGTTTGGAAAAGAAACGTTCGGCATACTCCACGcc < 5:440814/138‑1 (MQ=255) tCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATTATCATGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCcacg < 2:313793/136‑2 (MQ=255) tCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGccc > 1:6418/1‑139 (MQ=255) tCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGccc > 5:17678/1‑139 (MQ=255) tCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGccc > 7:76588/1‑139 (MQ=255) tCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGcc < 1:326675/138‑1 (MQ=255) tCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGcc < 5:140909/138‑1 (MQ=255) tCGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGcc < 7:318042/138‑1 (MQ=255) cGCAATGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCg < 8:123714/139‑1 (MQ=255) gCAATGATACCTGAGCCTCCAACGCTCGGATAGCTTGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGTAAAAGAAACCTGCGGCATAGTCCACGCCCGc < 4:242666/139‑1 (MQ=255) aTGATACCTGAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGcttc > 4:359904/1‑139 (MQ=255) gAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATcc < 6:139341/90‑1 (MQ=255) gAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATcc > 5:139341/1‑90 (MQ=255) gAGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGt > 2:395611/1‑138 (MQ=255) aGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTa < 7:66251/138‑1 (MQ=255) aGCCTCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTa < 6:224960/138‑1 (MQ=255) tCCAACGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCCTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGcttctt > 8:1042/1‑127 (MQ=255) caaCGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTa < 7:190346/130‑1 (MQ=255) caaCGCTCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTa > 8:190346/3‑132 (MQ=255) tCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAagcat < 7:305217/69‑1 (MQ=255) tCGGATAGCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAagcat > 8:305217/1‑69 (MQ=255) aagaaTGTCATTCCTATTTTTCGTTTGCCAATTGTTC‑CCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCa < 7:242554/135‑1 (MQ=255) gCATGTGATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCa < 2:6418/138‑1 (MQ=255) tttttccTATTTTTAGTTTTCTCATTGTTCTCCCCCAAGCACCTCATGAACAATCATCAGCATCCGTTTGGAAAAGAAACCTTCGGAATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGAt < 4:112684/133‑1 (MQ=255) tgATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGAt < 1:395611/138‑1 (MQ=255) tgATTCCTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCAAATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGAt < 6:10289/138‑1 (MQ=255) attccTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGAttt > 5:119179/4‑136 (MQ=255) tccTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCACGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGAtttcaa > 8:134327/2‑137 (MQ=255) cTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCa > 2:244204/1‑82 (MQ=255) cTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAata > 8:33875/1‑139 (MQ=255) cTATTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAata > 6:257467/1‑139 (MQ=255) aTTTTTAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAAtata > 3:333059/1‑139 (MQ=255) tttttAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAAtatac > 6:250769/1‑138 (MQ=255) tAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCa < 8:311277/138‑1 (MQ=255) tAGTTTTCTCATTGTTCGCCCCCAAGCACATCATGATCAAGCATCAGCATCCGTTTGCAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCa < 2:370291/138‑1 (MQ=255) | TTTAGTCTAAACGGAATGCTTGACGTAATAAAATGGATTTCATGTCCCTTTTCAGCAAGCTGCTTCCCGAGTTCTGTCGCAATGATACCTGAGCCTCCGACGCTCGGATAGCATGTGATCCCTATTTTTAGTTTTTTCATTGTTCGCCCCCAAGCACATCATGATCGAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACACCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAATGATCTCGATATAGCCA > CP006881/2175924‑2176189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |