Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,176,204	T→A	S189S (TCA→TCT)	U712_10885 ←	putative deacetylase ypjG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,176,204	0	T	A	100.0%	294.0 / NA	93	S189S (TCA→TCT)	U712_10885	putative deacetylase ypjG
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (45/48);  total (45/48)

CCCCCAAGCACATCATGATCGAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACACCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAATGATCTCGATATAGCCATTCGTCAGAGGAGTTGAAACTGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCATTGAGGCTTTGTTTTTTGGCCTCTATTGTATCCGAGATATCAATGACAAAATCAGGCTGATGAAAACCATTTATCATATAGTAGTAGACCTTG  >  CP006881/2176070‑2176339                                                                                                                                       |                                                                                                                                        cccccAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGaaa                                                                                                                                     >  8:97075/1‑139 (MQ=255)     cAAGCACATCATGATCACGCATCTGCATCCTTTTGGATAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGAATTCAATATACCCATTCGTCAGAGGAGTAGAAACGGa                                                                                                                                 <  5:244789/139‑1 (MQ=255)     cAAGCACATCATGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGa                                                                                                                                 <  6:395669/139‑1 (MQ=255)     cAAGCAAATCATGATCAAGCACCAGCATCCGTTTGGAAAAGAAACCTACGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGa                                                                                                                                 <  7:239186/139‑1 (MQ=255)              catGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGa                                                                                                                        >  8:259989/1‑139 (MQ=255)               atGGTCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGa                                                                                                                        <  2:349498/138‑1 (MQ=255)                tGATCAAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACg                                                                                                                      >  6:77579/1‑139 (MQ=255)                      agcatcagcatcCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGa                                                                                                                                 <  4:134084/122‑1 (MQ=255)                      agcatcagcatcCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGa                                                                                                                                 >  3:134084/1‑122 (MQ=255)                      agcatcagcatcCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATa                                                                                                                 >  7:389537/1‑138 (MQ=255)                      agcatcagcatcCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATa                                                                                                                 >  1:259898/1‑138 (MQ=255)                      agcatcagcatcCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACACATTCGACAGAGGAGTAGAAACGGAAACCTTTGACGGGATa                                                                                                                 >  3:206326/1‑138 (MQ=255)                      agcatcagcatcCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACAGTAAAGCTTTTCTCACGCTTCAACCATTTCAATATACCCATTCGACAGAGGAGTAGAAACGCAATCCTTTGACGGGATa                                                                                                                 >  2:201796/1‑138 (MQ=255)                       gcatcagcatcCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATaaa                                                                                                               <  5:77579/139‑1 (MQ=255)                       gcatcagcatcCGTTTGGAAAAGAAACCTTCGGCATACACCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATaaa                                                                                                               <  5:257467/139‑1 (MQ=255)                       gcagcagcatgCGTTTGGAAAAGAAAGCTGCGGCCTACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAAAGGAATCCTTTGACGGGATaaa                                                                                                               <  2:44048/139‑1 (MQ=255)                            agcatcCGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGc                                                                                                          >  4:135230/1‑139 (MQ=255)                                 ccGTTAGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTATCTCGCTTCAACGATTTCAAAATACCCATTCGTCAGATGAGTAGAAACGGAATCCTTTGAGGGGAAAAACTGACTTTTg                                                                                                     >  6:263931/1‑139 (MQ=255)                                  cGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTg                                                                                                     >  3:190383/1‑138 (MQ=255)                                  cGTTTGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTg                                                                                                     >  5:324242/1‑138 (MQ=255)                                      tGGAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAgg                                                                                                 <  5:243109/138‑1 (MQ=255)                                        gAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGcgt                                                                                              >  8:254169/1‑137 (MQ=255)                                        gAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGcgt                                                                                              >  1:51449/1‑137 (MQ=255)                                        gAAAAGAAACCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGcg                                                                                               <  5:250769/138‑2 (MQ=255)                                              aaaCCTTCGGCATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGc                                                                                        >  5:367604/1‑139 (MQ=255)                                                        cATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCTATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGATGCTTTGtttctt                                                                              <  1:201796/139‑1 (MQ=255)                                                        cATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGtttctt                                                                              <  7:33875/139‑1 (MQ=255)                                                        cATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGtttctt                                                                              <  3:135230/139‑1 (MQ=255)                                                        cATACTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGtttctt                                                                              <  4:26482/139‑1 (MQ=255)                                                        cATACACCACGCCCGCTTCATTACAGTTTAGATTAGCTCTCGCTTGAACGATTTCAATATACCCATACGTCACAGGAGTAGAAACGTAATCCCTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGtttctt                                                                              <  6:286573/139‑1 (MQ=255)                                                           aCTCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGc                                                                           <  8:389537/139‑1 (MQ=255)                                                            atCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGTTTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGc                                                                           <  5:263931/137‑1 (MQ=255)                                                             tCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAAcgg                                                                                                                                  >  6:111658/1‑80 (MQ=255)                                                             tCCACGCCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAAcgg                                                                                                                                  <  5:111658/82‑3 (MQ=255)                                                                acgcccGCTTCTTTACCGTAAAGCTTTTCTCTCTCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTa                                                                      <  4:190383/136‑1 (MQ=255)                                                                acgcccGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTa                                                                      <  6:324242/136‑1 (MQ=255)                                                                acgcccGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCAGTCGTCAGAGGAGTAGAAACGGAAGCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTa                                                                      <  3:415292/136‑1 (MQ=255)                                                                acgcccGCGTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGGAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTa                                                                      <  7:173528/136‑1 (MQ=255)                                                                 cgcccGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGcc                                                                          >  4:344618/3‑134 (MQ=255)                                                                 cgcccGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGcc                                                                          <  3:344618/132‑1 (MQ=255)                                                                 cgcccGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTAt                                                                     >  8:205913/3‑139 (MQ=255)                                                                 cgcccGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAACCATTTCAATATACCCATTAGTCAGAGGAGTAGAAACGGAATGCATTGACGGGATAAACTGGAGTTTGTAGCCGTTGAGGGTTTGTTTCTTTGCCTCTAt                                                                     >  2:176688/3‑139 (MQ=255)                                                                       cttcttTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGTCGGGATTAACTGGCTTTTGTAGGCGTTGAGGCTGTGTTTCTTTGCCTCTATTGTATc                                                               >  6:139430/1‑139 (MQ=255)                                                                       cttcttTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTa                                                                      >  6:445669/1‑132 (MQ=255)                                                                       cttcttTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTa                                                                      <  5:445669/132‑1 (MQ=255)                                                                       cttcttTACCGTAAAGCTTTTCTCTCGCGTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTGTGCCGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCGAGTGTATc                                                               >  7:87379/1‑139 (MQ=255)                                                                          cttTACCGTAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATcc                                                              <  7:205913/137‑1 (MQ=255)                                                                                  tAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGa                                                                                                                        <  8:230486/71‑1 (MQ=255)                                                                                  tAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGa                                                                                                                        >  7:230486/1‑71 (MQ=255)                                                                                  tAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGcc                                                                          <  7:285850/117‑1 (MQ=255)                                                                                  tAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGcc                                                                          >  8:285850/1‑117 (MQ=255)                                                                                  tAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCaa                                                    >  3:311113/1‑139 (MQ=255)                                                                                  tAAAGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCaa                                                    >  3:405587/1‑139 (MQ=255)                                                                                    aaGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAAt                                                   >  4:404523/1‑138 (MQ=255)                                                                                     aGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCct                                                                         <  8:307182/115‑1 (MQ=255)                                                                                     aGCTTTTCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCct                                                                         >  7:307182/1‑115 (MQ=255)                                                                                          ttCTCTCGCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACaaaa                                            >  3:167335/1‑139 (MQ=255)                                                                                                 gCTTCAACGATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCt                                     >  6:8292/1‑139 (MQ=255)                                                                                                 gCTTCAAAGATTTCACTCTACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCGTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCgg                                       <  8:260149/137‑1 (MQ=255)                                                                                                       acgATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGaa                               <  5:8292/137‑1 (MQ=255)                                                                                                       acgATTTCAATATACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGGTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGaa                               <  7:47701/137‑1 (MQ=255)                                                                                                           tttcaatatACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAAc                            >  5:61487/6‑138 (MQ=255)                                                                                                               aatatACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCAtt                        <  6:61487/137‑1 (MQ=255)                                                                                                                atatACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGCCGGGATAAACTGGCTTTTGTAGTGGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTa                      <  7:266405/139‑1 (MQ=255)                                                                                                                atatACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTa                      <  2:259898/139‑1 (MQ=255)                                                                                                                atatACCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTa                      <  7:259989/139‑1 (MQ=255)                                                                                                                 tataCCCATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTAt                     >  8:390905/1‑139 (MQ=255)                                                                                                                     cccATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACTGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCata                 <  7:134327/138‑1 (MQ=255)                                                                                                                     cccATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCtg                                    <  8:336620/119‑1 (MQ=255)                                                                                                                     cccATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCtg                                    >  7:336620/2‑120 (MQ=255)                                                                                                                     cccATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCat                  <  3:359904/137‑1 (MQ=255)                                                                                                                      ccATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCatat                <  7:254169/139‑1 (MQ=255)                                                                                                                      ccATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCatat                <  7:423849/139‑1 (MQ=255)                                                                                                                      ccATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCatat                <  7:97075/139‑1 (MQ=255)                                                                                                                       cATTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCAtata               <  8:76588/139‑1 (MQ=255)                                                                                                                        aTTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCAtt                        >  3:267136/1‑129 (MQ=255)                                                                                                                        aTTCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCAtt                        <  4:267136/129‑1 (MQ=255)                                                                                                                         ttCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGtttctt                                                                              <  1:239924/74‑1 (MQ=255)                                                                                                                         ttCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGtttctt                                                                              >  6:406826/1‑74 (MQ=255)                                                                                                                         ttCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGtttctt                                                                              <  5:406826/74‑1 (MQ=255)                                                                                                                         ttCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGtttctt                                                                              >  2:239924/1‑74 (MQ=255)                                                                                                                         ttCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTGTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCAtataa              >  5:71386/1‑137 (MQ=255)                                                                                                                         ttCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCAtataa              >  3:245309/1‑137 (MQ=255)                                                                                                                          tCGTCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCAtataa              >  3:418466/1‑136 (MQ=255)                                                                                                                             tCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGat                                                         >  4:106674/1‑91 (MQ=255)                                                                                                                             tCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGat                                                         <  3:106674/91‑1 (MQ=255)                                                                                                                             tCAGAGGAGTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCATAtaatagt          >  6:372265/1‑138 (MQ=255)                                                                                                                                gaggagTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCata                 <  4:200821/128‑1 (MQ=255)                                                                                                                                gaggagTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCata                 >  3:200821/1‑128 (MQ=255)                                                                                                                                   gagTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCATATAATAGTAAACCtt   >  7:83523/1‑139 (MQ=255)                                                                                                                                    agTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCATATAATAGTAAACCTTg  >  8:208004/1‑139 (MQ=255)                                                                                                                                    agTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCATATAATAGTAAACCTTg  >  6:223614/1‑139 (MQ=255)                                                                                                                                    agTAGAAACGGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCGTTGAGGCTTTGTTTCTTTGCCTCTATTGTATCCGAGATATCAATAACAAAATCCGGCTGATGAAAACCATTTATCATATAATAGTAAACCTTg  <  4:167335/139‑1 (MQ=255)                                                                                                                                       |                                                                                                                                        CCCCCAAGCACATCATGATCGAGCATCAGCATCCGTTTGGAAAAGAAACCTTCGGCATACTCCACACCCGCTTCTTTACCGTAAAGCTTTTCTCTCGCTTCAATGATCTCGATATAGCCATTCGTCAGAGGAGTTGAAACTGAATCCTTTGACGGGATAAACTGGCTTTTGTAGGCATTGAGGCTTTGTTTTTTGGCCTCTATTGTATCCGAGATATCAATGACAAAATCAGGCTGATGAAAACCATTTATCATATAGTAGTAGACCTTG  >  CP006881/2176070‑2176339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑