Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,176,509	C→A	A88S (GCG→TCA)	U712_10885 ←	putative deacetylase ypjG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,176,509	0	C	A	100.0%	255.9 / NA	82	A88S (GCG→TCA)	U712_10885	putative deacetylase ypjG
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (29/53);  total (29/53)

GTGGATTCCTGCGGAAAAGATTGCTTCTTCCACTAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAGATTGCTTTGGGCCGGCAGGTTCTGATGACACTGACAATCGCCCGAATTGCCTGATCACTCATCATCAGACCACGGTCTGGAAGTGTCAGCTGAATTCTTTTTTCTGCACCTAATACACGGGCTGCTTCAGCTGCTTCTTCTTTACGTAAACTGACCGTTCCGTTTG  >  CP006881/2176381‑2176634                                                                                                                                 |                                                                                                                              atgGATTCCGGCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGcc                                                                                                                     >  6:389757/2‑139 (MQ=255) acggATTCCGGCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGcc                                                                                                                     >  4:317052/3‑139 (MQ=255)    gATTCCGGCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTg                                                                                                                   <  2:115943/138‑1 (MQ=255)     aTTCCGGCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACGATTGACCGAATTGCCTGAt                                                                                                                 <  6:71386/139‑1 (MQ=255)     aTTCCGGCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGAt                                                                                                                 <  2:65417/139‑1 (MQ=255)     aTTCCGGCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGAt                                                                                                                 <  6:187538/139‑1 (MQ=255)     aTTCCGGCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGAt                                                                                                                 <  8:259308/139‑1 (MQ=255)        ccggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCa                                                                                                               <  7:331478/135‑1 (MQ=255)        ccggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCa                                                                                                               <  1:267691/135‑1 (MQ=255)        ccggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCa                                                                                                               <  8:83523/135‑1 (MQ=255)         cggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATTAAAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  1:55296/137‑1 (MQ=255)         cggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  6:113047/137‑1 (MQ=255)         cggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  5:389953/137‑1 (MQ=255)         cggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  4:288884/137‑1 (MQ=255)         cggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  3:236661/137‑1 (MQ=255)         cggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  4:294597/137‑1 (MQ=255)         cggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  1:176688/137‑1 (MQ=255)         cggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  8:87379/137‑1 (MQ=255)         cggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  8:81203/137‑1 (MQ=255)         cggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  8:158207/137‑1 (MQ=255)         cggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  8:163748/137‑1 (MQ=255)         cgccGGAAAAGATCTCATAGTCCAGCAGAGCAGCCGCATGTCCGTGAGCCTGATGGAGATCCTTGTTATACGTCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTTACCGAATTGCCTGATCACt                                                                                                             <  8:412410/136‑1 (MQ=255)          ggCGGAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACtc                                                                                                            <  3:317052/138‑1 (MQ=255)              gAAAAGATCGCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACtcatta                                                                                                        >  8:123298/1‑137 (MQ=255)                     tcgCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGcc                                                                                                 <  3:425735/137‑1 (MQ=255)                      cgCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGccg                                                                                                <  7:123298/138‑2 (MQ=255)                       gCTTCTTCCACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGccg                                                                                                <  4:204945/138‑2 (MQ=255)                               cACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGa                                                                                       <  5:240150/139‑1 (MQ=255)                               cACCAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGa                                                                                       <  5:389757/139‑1 (MQ=255)                                    gTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAgcgt                                                                                  <  3:217425/139‑1 (MQ=255)                                     tGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAgcgtt                                                                                 >  3:284019/1‑138 (MQ=255)                                     tGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAgcgtt                                                                                 >  2:44077/1‑138 (MQ=255)                                     tGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAgcgt                                                                                  >  4:198859/1‑138 (MQ=255)                                       cAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAg                                                                               >  3:438001/1‑139 (MQ=255)                                         gCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGATTTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCt                                                                             <  1:379392/139‑1 (MQ=255)                                         gCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCt                                                                             <  7:208004/139‑1 (MQ=255)                                           cGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGa                                                                           <  4:300013/139‑1 (MQ=255)                                           cGCATTGACGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGAGTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGa                                                                           <  5:68957/139‑1 (MQ=255)                                             cATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAAt                                                                         <  4:45777/139‑1 (MQ=255)                                               ttGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCt                                                                                                                    >  7:97318/1‑94 (MQ=255)                                               ttGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCt                                                                                                                    <  8:97318/94‑1 (MQ=255)                                               ttGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             >  8:366710/1‑101 (MQ=255)                                               ttGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  7:366710/101‑1 (MQ=255)                                               ttGCCGTGATCCGGATGGCGATCCATATTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTATGACGCGGTCTGGAAGCGTTATCTGAATTc                                                                       >  8:7045/1‑139 (MQ=255)                                                       aTCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCt                                                               >  7:95690/1‑139 (MQ=255)                                                       aTCCGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCt                                                               >  3:58078/1‑139 (MQ=255)                                                          cGGATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGcg                                                            <  1:65726/139‑2 (MQ=255)                                                          cGGATGGCGATCCTTTTTATACGGCATAAAAACCGCGTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTg                                                              <  8:352891/137‑1 (MQ=255)                                                           ggATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGcgc                                                           <  4:418466/139‑3 (MQ=255)                                                            gATGGCGCTCCTTTTTATACGGCATAAAATCCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGcc                                                          >  3:115614/1‑139 (MQ=255)                                                            gATGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGATGAATTCTTTTATCTGCGcc                                                          >  5:177356/1‑139 (MQ=255)                                                             aTGGCGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCt                                                         <  2:39699/139‑1 (MQ=255)                                                                 cGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCt                                                                      <  4:128296/122‑1 (MQ=255)                                                                 cGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCt                                                                      >  3:128296/1‑122 (MQ=255)                                                                 cGATCCTTTTTATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATa                                                     >  1:166879/1‑139 (MQ=255)                                                                         tttATACGGCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGgc                                              <  8:361056/138‑1 (MQ=255)                                                                                ggCATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAg                                      >  5:137641/1‑139 (MQ=255)                                                                                  cATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  5:48681/66‑1 (MQ=255)                                                                                  cATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             >  6:48681/1‑66 (MQ=255)                                                                                  cATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCCgct                                    >  4:312692/1‑139 (MQ=255)                                                                                  cATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAgct                                    >  3:362562/1‑139 (MQ=255)                                                                                  cATAAAAACCGCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAgct                                    >  6:391775/1‑139 (MQ=255)                                                                                      aaaaccgCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGctt                                <  1:381133/133‑1 (MQ=255)                                                                                      aaaaccgCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGctt                                <  1:44077/133‑1 (MQ=255)                                                                                          ccgCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGcttcttc                            <  4:284019/137‑1 (MQ=255)                                                                                            gCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             >  6:144066/1‑56 (MQ=255)                                                                                            gCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACt                                                                                                             <  5:144066/56‑1 (MQ=255)                                                                                            gCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGccg                                                                                                <  4:376298/69‑2 (MQ=255)                                                                                            gCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGccg                                                                                                >  3:376298/1‑68 (MQ=255)                                                                                            gCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCt                                                                             <  2:245467/88‑1 (MQ=255)                                                                                            gCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCt                                                                             >  1:245467/1‑88 (MQ=255)                                                                                            gCTTTTGGCCGACAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGcttcttctt                          >  6:57048/1‑139 (MQ=255)                                                                                                       acAGATTCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGCTTCTTCTTTACGCAAACTg               >  3:218723/2‑139 (MQ=255)                                                                                                            ttCTGATGACAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGCTTCTTCTTTACGCAAACTGAccgt          <  8:95690/139‑1 (MQ=255)                                                                                                            tgatgctgaCAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCTGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGCTTCTTCTTTACGCAAACTGAccgt          <  4:58078/133‑1 (MQ=255)                                                                                                                 atgaCAGTGACAATTGACCGAATTTGCTGATCACTCATTATTAGGCCGCGGTCTGGAATCGGTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGCTTCTTCTTTACGCAAACTGAccgtac        <  1:252107/136‑3 (MQ=255)                                                                                                                 atgaCAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGCTTCTTCTTTACGCAAACTGaccgtaccgt     >  7:12557/1‑139 (MQ=255)                                                                                                                 atgaCAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGCTTCTTCTTTACGCAAACTGaccgtaccgt     <  2:166879/139‑1 (MQ=255)                                                                                                                 atgaCAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGCTTCTTCTTTACGCAAACTGaccgtaccgt     <  3:387517/139‑1 (MQ=255)                                                                                                                 atgaCAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGCTTCTTCTTTACGCAAACTGaccgtaccgt     >  6:85466/1‑139 (MQ=255)                                                                                                                 atgaCAGTGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGCTTCTTCTTTACGCAAACTGAccgtac        <  4:115614/136‑3 (MQ=255)                                                                                                                      agtGACAATTGACCGAATTGCCTGATCACTCATTATTAGGCCGCGGTCTGGAAGCGTTAGCTGAATTCTTTTATCTGCGCCTAATATGCGGGCTGCTTCAGCTGCTTCTTCTTTACGCAAACTGAccgtaccgttag  >  4:222143/3‑135 (MQ=255)                                                                                                                                 |                                                                                                                              GTGGATTCCTGCGGAAAAGATTGCTTCTTCCACTAGTGCAGCCGCATTGCCGTGATCCGGATGGCGATCCTTTTTATACGGCATAAAGATTGCTTTGGGCCGGCAGGTTCTGATGACACTGACAATCGCCCGAATTGCCTGATCACTCATCATCAGACCACGGTCTGGAAGTGTCAGCTGAATTCTTTTTTCTGCACCTAATACACGGGCTGCTTCAGCTGCTTCTTCTTTACGTAAACTGACCGTTCCGTTTG  >  CP006881/2176381‑2176634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑