| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 1,387,677 | G→T | intergenic (‑202/+128) | U712_07095 ← / ← U712_07100 | Methylthioribose kinase/UPF0012 hydrolase mtnU |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,387,677 | 0 | G | T | 98.7% | 236.9 / NA | 79 | intergenic (‑202/+128) | U712_07095/U712_07100 | Methylthioribose kinase/UPF0012 hydrolase mtnU |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (40/38); total (41/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTTAACATCTATGTCCGCCTCTCTTATCTCTCAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTGTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGTAACAGGTAATTTAGTTAGTTGTCAATATATTTTTT > CP006881/1387544‑1387806 | gCTTAACATCTATGTCCGCCTCTCTTATCTCTCAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTtgg > 1:307744/1‑139 (MQ=255)gCTTAACATCTATGTCCGCCTCTCTTATCTCTCAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTggg > 6:363727/1‑139 (MQ=255) aaCATCTATGTCCGCCTCTCTTATCTCTCAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTc > 3:168349/1‑138 (MQ=255) aaCATCTATGTCCGCCTCTCTTATCTCTCAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTc > 7:381590/1‑138 (MQ=255) aaCATCTATGTCCGCCTCTCTTATCTCTCAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGGTGCGTTTGGGGtg > 4:101789/1‑137 (MQ=255) aaCATCTATGTCCGCCTCTCTTATCTCTCAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCAGTTCACAATGGAATTACGGTC‑GGGTGCTGTTTGGGTc > 7:386925/1‑138 (MQ=255) tATGTCCGCCTCTCTTATCTCTCAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGc > 7:126513/1‑139 (MQ=255) gCCTCTCTTATCTCTCAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGGTTTTTGGGTCAAAAGGCCAAATcc > 2:131321/1‑139 (MQ=255) tctctcAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCaa < 4:216249/138‑1 (MQ=255) tctcAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGGGTTTGGGGTCCAAACGCCAAAAACCACGccccccac > 2:406089/1‑134 (MQ=21) tctcAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAActc > 6:308053/1‑139 (MQ=255) tcagatcagaTCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAAct < 2:307744/136‑1 (MQ=255) tcagatcagaTCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACtctc > 5:398121/1‑139 (MQ=255) cagatcagatCTGAATGTAAATAGCACCGTGCCTTAAGAGACCAGCCTCTCGGCGCGAAAAAAATGCGCCCCAGTTAACAATTGAATTACGGTC‑GGTTTGTTTTGGGGGCAAAAGGGCAAAACCCTCGGCCAAcacga > 1:38444/1‑134 (MQ=255) cagatcagatCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTTGGTTTGGGGTCAAAAAGCCAAAAACCTCGCCCAACtctc > 2:342677/1‑138 (MQ=21) cagatcagatCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGGGTTTGGGGTCCAACGGCCACATCCCTCGCCCCACTcgcg > 2:351522/1‑139 (MQ=21) cagatcagatCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACtctc > 2:263852/1‑138 (MQ=255) cagatcagatCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCg > 6:122874/1‑139 (MQ=255) gatcagatcTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGAt < 6:398121/139‑1 (MQ=255) gatcagatcTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGAt < 3:324379/139‑1 (MQ=255) gatcTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAagag < 8:126513/139‑1 (MQ=255) tcTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAgaga < 4:414501/138‑1 (MQ=255) aaTGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAgaga < 7:343449/134‑1 (MQ=255) aaTGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAgaga < 1:263852/134‑1 (MQ=255) aaTGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAgaga < 5:308053/134‑1 (MQ=255) aaTGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAATAGAatata > 3:299041/1‑139 (MQ=255) aaTGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAatata > 3:315672/1‑139 (MQ=255) aaTTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTTGGGTGAAAAGGCCAAATCCCTCGCCCAACTCTAGATAAGAGAATATATTAAc > 7:11072/1‑139 (MQ=18) ccGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGa < 2:320284/139‑1 (MQ=255) ccGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGa < 2:122778/139‑1 (MQ=255) ccGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGa < 8:344281/139‑1 (MQ=255) cGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGa > 1:11847/1‑138 (MQ=255) cGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCGTTTGGGGTGAAAAGGCCCAATCCCGCGCCCCACTGGCGATTAGAGAATATATTCAGTTGgtttg > 1:174960/1‑136 (MQ=18) gTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGGTTTTGGGGTGAAAAGGCCAAAAACCGCGCCCAAATCAAGAAAAAAGAATATATTAACATGTTTTAc > 6:347270/1‑138 (MQ=18) gTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGGGTTTGGGGTCAAAAGGGCAAATCCCACGCCCCACACAGGCTAAGAGAATTTATTGACTTGTTTGAc > 4:72800/1‑138 (MQ=21) gTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCaa > 3:438313/1‑84 (MQ=255) gTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCaa < 4:438313/84‑1 (MQ=255) gTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATaa < 7:77614/115‑1 (MQ=255) gTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATaa > 8:77614/1‑115 (MQ=255) gTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATTTTAACTTGTTTGAc > 1:101340/1‑138 (MQ=255) gTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGAc > 6:357339/1‑138 (MQ=255) gTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAAACCCTCGCCCAACTCACGATAAGAGAATATATTAACTTGTTTTAc > 4:87005/1‑138 (MQ=21) gTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGGTGCTTTTGGGGGCAAAAGGCCAAATCCCGCGCCCAACTCTCGGTAATAGAAGATATTCACGTGttttcc > 5:132715/1‑135 (MQ=21) tGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTGAAAAGGCCAAAACCCTCGCCCAACACGCGATAAGAGTATAAATTCACTTGTTTgtaaa > 1:432956/1‑135 (MQ=21) tGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGGTGCGTTTTGGGTGAAAAGGCCAAAACCCGCGCCCAACTCTCGATAAGAGAATATATTAACATTTTTGACaa > 4:408712/1‑139 (MQ=21) aaGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCt < 2:11847/137‑1 (MQ=255) gaCCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTTCGTTTGGGGTGAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAAAATATTAACTTGTTTGACAATTCGAATTTa > 4:288220/1‑139 (MQ=21) cccAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTGGCGTTTTGGGTCTAAGGGGCCACACCCGCGCCCCACAATCGATAAAGGAATATATTTACTTGGGTGACAATTACAAttttt > 4:345234/2‑137 (MQ=16) aCCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTCGGGTTGGTTTTGGGG‑GAAAAGGCCCAAAACCACCCCCACCACGAGCAAAAAGAAAATATTAACATGTTTTTCAATTGTAAatttt > 6:64740/1‑137 (MQ=12) aCCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGGTGCTTTTGGGGTCAAGAGGCCAAATCCCTCGCCCAACGCGCGAGAAGAGAATATATTCACTTGTTTTACAATTCTAATTTa > 2:240160/1‑138 (MQ=25) ccATCGTCTCGGCGAGAAAATAATGCTCCCCATTTCACAATGGAATTACGGTC‑GGGTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCACAACGCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATc < 5:35217/139‑1 (MQ=21) ccAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATc < 5:122874/139‑1 (MQ=255) ccAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATc < 4:315672/139‑1 (MQ=255) ccAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATc < 3:87005/139‑1 (MQ=255) tcGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAAAATATTCACTTGTTTGACAATTCTAATTTATCAGTtgat > 3:168980/1‑138 (MQ=255) cGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTtgatg > 7:298869/1‑138 (MQ=255) ggCGCGAAAAAAATGCGCCCCATTTCACAATGGTATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTtgatg < 5:347270/137‑1 (MQ=255) ggCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTtgatg < 3:408712/137‑1 (MQ=255) ggCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGaa < 3:411106/139‑1 (MQ=255) ggCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGaa < 5:357339/139‑1 (MQ=255) gcgcGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAAc < 4:299041/139‑1 (MQ=255) cgcgAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAAcg < 7:438907/139‑2 (MQ=255) cgcgAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACa < 8:298869/139‑1 (MQ=255) cgcgAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACa < 8:381590/139‑1 (MQ=255) cgcgAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACa < 8:386925/139‑1 (MQ=255) aaaaaaaTGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGt < 3:101789/139‑1 (MQ=255) aaaaTGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGTAAc < 4:136437/139‑1 (MQ=255) aaaaTGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGTAAc < 1:342677/139‑1 (MQ=255) aaaaTGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGTAAc < 5:363727/139‑1 (MQ=255) tGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGTAACAGGt < 8:89869/139‑1 (MQ=255) gcCCCATTTCACAATGGAATTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAAAATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGTAACAGGTAAt < 4:168980/139‑1 (MQ=255) gAATTACGGTC‑GGTTGGTTTTTGGGGCAAAAGGCCCAATACCACGCCCCACTCACGATAAAATAATATATTAACTTGTTTGACAATTCTAATTTATCAGGTGATGAAAATGGTAAATGGTAATTTATTTTGTTGTGaa > 2:204114/1‑138 (MQ=255) aaTTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAat < 2:47839/65‑1 (MQ=255) aaTTACGGTC‑GGTTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAat > 1:47839/1‑65 (MQ=255) gtc‑ggtTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGTAACAGGTAATTTAGTTAGTTGTCAATATAttttt < 1:351522/139‑1 (MQ=255) gtc‑ggtTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGTAACAGGTAATTTAGTTAGTTGTCAATATAttttt < 1:313290/139‑1 (MQ=255) c‑ggtTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTAACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGTAAAAGGTAATTTAGTTATTTGTCAATATAtttttt > 7:178999/1‑138 (MQ=255) ggtTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGTAAc > 3:100757/1‑105 (MQ=255) ggtTGCTTTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGTAAc < 4:100757/105‑1 (MQ=255) | GCTTAACATCTATGTCCGCCTCTCTTATCTCTCAGATCAGATCTGAATGGAATTAGCACCGTGCCTTAAGAGACCAGCGTCTCGGCGCGAAAAAAATGCGCCCCATTTCACAATGGAATTACGGTC‑GGTTGCTGTTGGGGTCAAAAGGCCAAATCCCTCGCCCAACTCTCGATAAGAGAATATATTCACTTGTTTGACAATTCTAATTTATCAGTTGATGAACATGGTAACAGGTAATTTAGTTAGTTGTCAATATATTTTTT > CP006881/1387544‑1387806 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |