Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,177,348 T→C A216A (GCA→GCG U712_10895 ← Dihydrodipicolinate reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,177,3480TC98.6% 231.4 / ‑4.9 73A216A (GCA→GCGU712_10895Dihydrodipicolinate reductase
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (43/29);  total (43/30)
Fisher's exact test for biased strand distribution p-value = 4.11e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.61e-01

ATCCGTACACAAGCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACACCTGACATGAAAGAAGCGCGGTTATAGGAATCGTGGCGGATCTGAAGCGTTTGGCCATCCATGCCGAACATGACTTCCTGATGTGCGATCAATCCCGGAAGACGGACACTGTGCAAGCGGATACCGTTTTGTTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGGTGTCCTTGCTGCTTTTCTTGACGGACTTCTGAAATCATTTCCG  >  CP006881/2177212‑2177481
                                                                                                                                        |                                                                                                                                     
aaccatACACAAGCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATgcgc                                                                                                                                     >  7:66984/6‑139 (MQ=255)
     tACACAAGCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGAt                                                                                                                                  >  5:197438/1‑137 (MQ=255)
     tACACAAGCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGAt                                                                                                                                  >  7:289246/1‑137 (MQ=255)
     tACACAAGCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGAt                                                                                                                                  >  7:308465/1‑137 (MQ=255)
     tACACAAGCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCa                                                                                                                                >  8:16971/1‑139 (MQ=255)
     tACACAAGCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGACTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGACGCGATTGGCCATCCATGCCGAACATGACCTACTCATGCTCGAt                                                                                                                                  >  1:19167/1‑137 (MQ=255)
      acacAAGCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCag                                                                                                                               >  1:401730/1‑138 (MQ=255)
       cacaAGCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGAGCagt                                                                                                                              >  1:153494/1‑137 (MQ=255)
          aaGCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTccc                                                                                                                           >  8:10046/1‑139 (MQ=255)
            gCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCgg                                                                                                                         <  2:122967/139‑1 (MQ=255)
            gCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCgg                                                                                                                         <  3:295663/139‑1 (MQ=255)
            gCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCg                                                                                                                          >  3:135951/1‑138 (MQ=255)
             cTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGAt                                                                                                                                  <  4:287377/129‑1 (MQ=255)
             cTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGAt                                                                                                                                  >  3:287377/1‑129 (MQ=255)
               gATCAATCTTCATGACTTGTTCGACTGAAAGTTTAACGACTCACATTAAAGAAGCAATGTTATAAGAATCATTCCTTATCTGAAGCGTTAGTCCATCCATGCCGAACATGACCTACTGATGCGCGATCAGTcccag                                                                                                                         >  7:271170/1‑134 (MQ=255)
                aTCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGa                                                                                                                     >  6:423356/1‑139 (MQ=255)
                aTCAATCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGa                                                                                                                     >  6:114418/1‑139 (MQ=255)
                    aTCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGa                                                                                                                 <  8:289246/139‑1 (MQ=255)
                    aTCTTCATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGa                                                                                                                 <  1:185118/139‑1 (MQ=255)
                         cATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGTGCGATCAGTCCCGGAAGACGGacg                                                                                                               <  7:334292/136‑2 (MQ=255)
                         cATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGacg                                                                                                               <  2:132632/136‑2 (MQ=255)
                         cATGACTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGacg                                                                                                               <  5:320145/136‑2 (MQ=255)
                             aCTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCa                                                                                                        <  7:16971/139‑1 (MQ=255)
                              cTTGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCaa                                                                                                       <  8:66984/139‑1 (MQ=255)
                               ttGTTCGACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAg                                                                                                      >  4:433712/1‑139 (MQ=255)
                                     gACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATa                                                                                                <  7:181233/139‑1 (MQ=255)
                                     gACTGACAGTTTAACGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATa                                                                                                <  2:401730/139‑1 (MQ=255)
                                                 aaCGCCTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTc                                                                                     <  5:150222/138‑1 (MQ=255)
                                                  acgccTGACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCg                                                                                   <  5:423356/136‑1 (MQ=255)
                                                        gACATGAAAGACGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGAGCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGctcctc                                                                             >  8:125315/1‑139 (MQ=255)
                                                        gACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGctcctc                                                                             >  8:30206/1‑139 (MQ=255)
                                                        gACATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGCCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGACCCGGAAGACGGACGCTGAGCAAGCTAATACCGATTTGCTCCGctcct                                                                              >  2:260574/1‑138 (MQ=255)
                                                         aCATGAAAGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCctct                                                                            <  6:197438/139‑1 (MQ=255)
                                                              aaaGAAGCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCTCTTGCTcc                                                                      >  4:86123/1‑139 (MQ=255)
                                                                agaagCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGAGGCTGTGCAAGCgaa                                                                                                  >  8:282402/1‑108 (MQ=255)
                                                                agaagCACGGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCgaa                                                                                                  <  7:282402/110‑3 (MQ=255)
                                                                     cacgGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCgg                                                                                                                         <  5:414989/80‑1 (MQ=255)
                                                                     cacgGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCgg                                                                                                                         >  6:414989/3‑82 (MQ=255)
                                                                     cacgGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATa                                                                                                <  5:79250/105‑1 (MQ=255)
                                                                     cacgGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATa                                                                                                >  6:79250/3‑107 (MQ=255)
                                                                     cacgGTTATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCGTGCGCCTGGgag                                                                >  5:240615/3‑139 (MQ=255)
                                                                          ttATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGAt                                                                                                                                  >  8:102565/1‑68 (MQ=255)
                                                                          ttATAAGAATCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGAt                                                                                                                                  <  7:102565/68‑1 (MQ=255)
                                                                                  aTCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCa                                                   >  8:404346/1‑139 (MQ=255)
                                                                                  aTCATGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCa                                                   >  6:385112/1‑139 (MQ=255)
                                                                                   tcatGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCAt                                                  <  8:308465/136‑1 (MQ=255)
                                                                                   tcatGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCAt                                                  <  3:433712/136‑1 (MQ=255)
                                                                                    catGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATc                                                 >  8:293415/3‑139 (MQ=255)
                                                                                    catGGCGTATCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATCCGCGATCAGTCCCGGAAGACGGACGCAGTGCAAGCGAATACCGTTATGCTCCGCTCCTCTTGCGCCTGGGAGAAGTTCTTTTTCATc                                                 >  5:278583/3‑139 (MQ=255)
                                                                                    catGGCGTATCTGAAGCGTTTGGCCATCAATGACGAACATTCCATCCTCATGCGCGATCAGACCCGGAAGACGCACGCTGTGCAAGCGCAAACCGTTTTGCTCCGCTCCTCTGGCTCCTCGGAGAATTTCTATTTAATc                                                 >  2:161185/3‑139 (MQ=255)
                                                                                             tCTGAAGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTcc                                        >  6:321801/1‑139 (MQ=255)
                                                                                                 aaGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTtgc                                    >  5:406547/1‑139 (MQ=255)
                                                                                                 aaGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTtg                                     <  5:114418/138‑1 (MQ=255)
                                                                                                  aGCGTTTGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCATCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTtgct                                   >  7:198326/1‑139 (MQ=255)
                                                                                                        tGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATc                                                                                                                                 >  5:56364/1‑39 (MQ=255)
                                                                                                        tGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATc                                                                                                                                 <  6:56364/39‑1 (MQ=255)
                                                                                                        tGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCt                                       <  7:53483/129‑1 (MQ=255)
                                                                                                        tGGCCATCCATGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCt                                       >  8:53483/1‑129 (MQ=255)
                                                                                                              tccatGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGc                                                                                                     <  7:435926/61‑1 (MQ=255)
                                                                                                              tccatGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGc                                                                                                     >  8:435926/1‑61 (MQ=255)
                                                                                                               ccatGCCGAACATGACCTCCGGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACg                      <  8:53019/139‑1 (MQ=255)
                                                                                                                catGCCGAACATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACg                      >  3:25513/1‑138 (MQ=255)
                                                                                                                         cATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAAtt                                                            >  1:399352/1‑91 (MQ=255)
                                                                                                                         cATGACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAAtt                                                            <  2:399352/91‑1 (MQ=255)
                                                                                                                            gACCTCCTGATGCGCGCTCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCGTTTCTGTACGGACTTCTGAAAt          >  5:171362/1‑138 (MQ=255)
                                                                                                                            gACCTCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTACTTGCTGCTTTTCTTTACGGACTTCTTAAAt          >  2:161686/1‑138 (MQ=255)
                                                                                                                             acctCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCa        >  5:210947/4‑139 (MQ=255)
                                                                                                                             acctCCTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCa        >  5:42541/4‑139 (MQ=255)
                                                                                                                                 ccTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTc    >  3:151202/1‑139 (MQ=255)
                                                                                                                                 ccTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTCCTCCTGGGAGAATTTCTTATTCTTCCGGATGTGCTTGCTGCTTTTCTTTACGGACTTCAGAAATCATTTc    >  8:416337/1‑139 (MQ=255)
                                                                                                                                  cTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGaa            >  1:21253/1‑130 (MQ=255)
                                                                                                                                  cTGATGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGaa            <  2:21253/130‑1 (MQ=255)
                                                                                                                                     aTGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCg  <  8:198326/137‑1 (MQ=255)
                                                                                                                                     aTGCGCGATCAGTCCCGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCg  <  7:351830/137‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                     
ATCCGTACACAAGCTGATCAATCTTCATGACTTGTTCGACTGACAGTTTAACACCTGACATGAAAGAAGCGCGGTTATAGGAATCGTGGCGGATCTGAAGCGTTTGGCCATCCATGCCGAACATGACTTCCTGATGTGCGATCAATCCCGGAAGACGGACACTGTGCAAGCGGATACCGTTTTGTTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGGTGTCCTTGCTGCTTTTCTTGACGGACTTCTGAAATCATTTCCG  >  CP006881/2177212‑2177481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: