Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,177,495	C→A	T167T (ACG→ACT)	U712_10895 ←	Dihydrodipicolinate reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,177,495	0	C	A	100.0%	258.1 / NA	82	T167T (ACG→ACT)	U712_10895	Dihydrodipicolinate reductase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (38/44);  total (38/44)

CCGGAAGACGGACACTGTGCAAGCGGATACCGTTTTGTTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGGTGTCCTTGCTGCTTTTCTTGACGGACTTCTGAAATCATTTCCGCTGTTTTCAGCGCCGTTCCGCTTGGTGCGTCAAGCTTCCGATCATGGTGTAGCTCAATAATCTCAACATCCTCAAAGTAGTTGGCAGCCATTTTCGAAAATTTCATCATCAGCACCGCACCAAGTGCAAAGTTTGGAGCGATGA  >  CP006881/2177359‑2177625                                                                                                                                         |                                                                                                                                   ccGGAAGACGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGt                                                                                                                                  <  7:293415/139‑1 (MQ=255)         cGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTg                                                                                                                          >  8:80594/1‑139 (MQ=255)         cGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTg                                                                                                                          <  1:113405/139‑1 (MQ=255)         cGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTg                                                                                                                          >  2:384562/1‑139 (MQ=255)         cGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTg                                                                                                                          >  2:289123/1‑139 (MQ=255)         cGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTg                                                                                                                          >  2:126560/1‑139 (MQ=255)         cGGACGCTGTGCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTATCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTg                                                                                                                          >  3:11693/1‑139 (MQ=255)              gcTGTGCAAGCGAATACCGTTTTGCTCCGCT‑CTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGt                                                                                                                    <  3:86123/138‑1 (MQ=255)                  tgCAAGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCa                                                                                                                  <  5:142110/138‑1 (MQ=255)                      aGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCtt                                                                                                             <  1:289123/139‑1 (MQ=255)                      aGCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCAGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCtt                                                                                                             >  4:286092/1‑139 (MQ=255)                       gCGAATAGCGTTTTGCTCCGCTACTCTTGCTGCTGGGAGAATTTCTTTTTCATGCGGATTTCCTTGCTTGTTTTCTTTTCGGACTTCTGAAATGATTTACGCTGTTTTAATCGCAGTTCCGCTTGGTGCGTCAAGCTTc                                                                                                            <  8:271170/139‑1 (MQ=255)                       gCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTc                                                                                                            >  3:240520/1‑139 (MQ=255)                       gCGAATACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTc                                                                                                            >  1:80995/1‑139 (MQ=255)                          aaTACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTctgg                                                                                                         >  4:82903/2‑136 (MQ=255)                          aaTACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCGTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTctgg                                                                                                         >  2:421237/2‑136 (MQ=255)                          aaTACCGTTTTGCTCCGCTCCTCTAGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTCAAATCATTTCCGCAGTTATAACCGCAGTTCCCCTTGGAGCGTCAAGCTTctgg                                                                                                         >  2:438198/2‑136 (MQ=255)                           aTACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTctggt                                                                                                        <  4:151202/139‑5 (MQ=255)                           aTACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTctggt                                                                                                        <  7:80594/139‑5 (MQ=255)                            tACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGTACTTCTGAAATCATTTCCGCTGTTTTTAGCGCAGTTCCGCTTGGTGCGTCAAGCTTctggt                                                                                                        >  4:69440/1‑134 (MQ=255)                            tACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCtt                                                                                                             <  7:439266/133‑1 (MQ=255)                            tACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCtt                                                                                                             >  8:439266/1‑133 (MQ=255)                            tACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGGCCAGCTTctggt                                                                                                        >  7:162556/1‑134 (MQ=255)                            tACCGTTTTGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGATGTTTTAAGCGCAGTTACGCTTGGTGCGTCAAGCTTctggt                                                                                                        >  4:290010/1‑134 (MQ=255)                            aaCCGTTATGCTCCGCTCCTCTTGCTCCTGGCAGAATATCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCGGCTCTTTTAAGCGCAGTTCCGCATGGTGCGTCAAGCTTctggt                                                                                                        >  6:157955/2‑134 (MQ=255)                                 ttttGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTGCGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATgat                                                                                                  >  4:425524/1‑137 (MQ=255)                                 ttttGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATgat                                                                                                  >  7:413174/1‑137 (MQ=255)                                 ttttGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATgat                                                                                                  >  7:352892/1‑137 (MQ=255)                                 ttttGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATgat                                                                                                  >  8:100700/1‑137 (MQ=255)                                   ttGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCatgatg                                                                                                 <  7:404346/138‑1 (MQ=255)                                   ttGCTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCatgatg                                                                                                 <  1:421237/138‑1 (MQ=255)                                      ctCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATGCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAg                                                                                              <  1:438198/137‑1 (MQ=255)                                         cGCTCCTCTTGCTCCTGGGAGAATTTCTTTCTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCa                                                                                          <  4:11693/139‑1 (MQ=255)                                           ctcctcTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCTCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCaa                                                                                         >  5:13823/1‑138 (MQ=255)                                           ctcctcTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTctggt                                                                                                        <  1:427286/123‑5 (MQ=255)                                           ctcctcTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTctggt                                                                                                        >  2:427286/1‑119 (MQ=255)                                           ctcctcTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCaa                                                                                         >  4:166552/1‑138 (MQ=255)                                           ctcctcTTGCTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCaa                                                                                         >  1:96216/1‑138 (MQ=255)                                                    cTCCTTGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTATGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCGTCTGGTCATGATGAAGCTCAATAATCTCAAc                                                                               <  6:240615/139‑1 (MQ=255)                                                    cTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGATATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAAc                                                                               <  6:278583/139‑1 (MQ=255)                                                    cTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAAc                                                                               <  6:210947/139‑1 (MQ=255)                                                    cTCCTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAAc                                                                               <  7:125315/139‑1 (MQ=255)                                                      ccTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACAt                                                                             >  4:317739/1‑139 (MQ=255)                                                      ccTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACAt                                                                             >  2:42407/1‑139 (MQ=255)                                                      ccTGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACAt                                                                             >  6:321494/1‑139 (MQ=255)                                                      ccTGGGAGAATTTCTTTTTCATCAGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCACGCTTCTGGTCATGCTGCAGCTCAATAATCTCAACAt                                                                             >  2:241158/1‑139 (MQ=255)                                                        tGGGAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATcc                                                                           >  4:381231/1‑139 (MQ=255)                                                          ggAGAATTTCTTTTTCATCCGGATGTCCTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCt                                                                          <  3:381231/138‑1 (MQ=255)                                                                                     cTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTTAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGaaa                                               <  7:416337/138‑1 (MQ=255)                                                                                         ctgctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtc                                          <  8:352892/139‑1 (MQ=255)                                                                                         ctgctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtc                                          <  8:413174/139‑1 (MQ=255)                                                                                         ctgctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtc                                          <  6:406547/139‑1 (MQ=255)                                                                                            ctTTTCTTTACGGTCTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatc                                       <  1:241158/139‑1 (MQ=255)                                                                                            ctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatc                                       <  4:25513/139‑1 (MQ=255)                                                                                            ctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatc                                       <  7:100700/139‑1 (MQ=255)                                                                                            ctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatc                                       <  3:317739/139‑1 (MQ=255)                                                                                            ctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcat                                        >  4:358883/1‑138 (MQ=255)                                                                                              tttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     >  1:290875/1‑139 (MQ=255)                                                                                               ttCTTTGCGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     <  3:425524/138‑1 (MQ=255)                                                                                               ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     <  1:412738/138‑1 (MQ=255)                                                                                               ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     <  1:126560/138‑1 (MQ=255)                                                                                               ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     <  4:135951/138‑1 (MQ=255)                                                                                               ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     <  3:251917/138‑1 (MQ=255)                                                                                               ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     <  3:184361/138‑1 (MQ=255)                                                                                               ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     <  5:321801/138‑1 (MQ=255)                                                                                               ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     <  7:10046/138‑1 (MQ=255)                                                                                               ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGGCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     <  5:117284/138‑1 (MQ=255)                                                                                               ttCTTTACGGACTTCTGAAATCATTTCAGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     <  1:161686/138‑1 (MQ=255)                                                                                                tCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcatc                                    <  1:384562/138‑1 (MQ=255)                                                                                                    taCGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCt                                                                          <  2:250175/95‑1 (MQ=255)                                                                                                    taCGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCt                                                                          >  1:250175/2‑96 (MQ=255)                                                                                                    taCGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     >  6:208609/2‑133 (MQ=255)                                                                                                    taCGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                     <  5:208609/132‑1 (MQ=255)                                                                                                    taCGGACTTCTGAAATCATTTACGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAAACTCAACATCCTCAAAATAGTTGGCAGCCATTTTTTAAAATTTAATCATAAgta                                >  4:245296/2‑136 (MQ=255)                                                                                                                aaaTCATTTCCGCTTGTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGGTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAgcgc                   <  2:153494/139‑1 (MQ=255)                                                                                                                     aTTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCaaaat              >  8:72192/1‑137 (MQ=255)                                                                                                                     aTTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCaaaat              >  7:349450/1‑137 (MQ=255)                                                                                                                       ttCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAAttt            >  1:36289/1‑139 (MQ=255)                                                                                                                       ttCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAAttt            >  7:151637/1‑139 (MQ=255)                                                                                                                          cGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTggc         <  4:240520/139‑2 (MQ=255)                                                                                                                            cTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGgcgc       <  2:96216/139‑1 (MQ=255)                                                                                                                                  taaGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCgatga  <  8:438626/136‑1 (MQ=255)                                                                                                                                         |                                                                                                                                   CCGGAAGACGGACACTGTGCAAGCGGATACCGTTTTGTTCCGCTCCTCTTGCTCCTGGGAGAATTTCTTTTTCATCCGGGTGTCCTTGCTGCTTTTCTTGACGGACTTCTGAAATCATTTCCGCTGTTTTCAGCGCCGTTCCGCTTGGTGCGTCAAGCTTCCGATCATGGTGTAGCTCAATAATCTCAACATCCTCAAAGTAGTTGGCAGCCATTTTCGAAAATTTCATCATCAGCACCGCACCAAGTGCAAAGTTTGGAGCGATGA  >  CP006881/2177359‑2177625

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑