Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,177,558	G→A	Y146Y (TAC→TAT)	U712_10895 ←	Dihydrodipicolinate reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,177,558	0	G	A	100.0%	221.4 / NA	70	Y146Y (TAC→TAT)	U712_10895	Dihydrodipicolinate reductase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (28/42);  total (28/42)

CTTGCTGCTTTTCTTGACGGACTTCTGAAATCATTTCCGCTGTTTTCAGCGCCGTTCCGCTTGGTGCGTCAAGCTTCCGATCATGGTGTAGCTCAATAATCTCAACATCCTCAAAGTAGTTGGCAGCCATTTTCGAAAATTTCATCATCAGCACCGCACCAAGTGCAAAGTTTGGAGCGATGATGGCTCCGATTCCCTTCTCTTCTGTTAATGACGTAAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTT  >  CP006881/2177443‑2177693                                                                                                                    |                                                                                                                                        cTTGCTGCTTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTTAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGaaa                                                                                                                   <  7:416337/138‑1 (MQ=255)     ctgctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtc                                                                                                              <  6:406547/139‑1 (MQ=255)     ctgctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtc                                                                                                              <  8:413174/139‑1 (MQ=255)     ctgctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtc                                                                                                              <  8:352892/139‑1 (MQ=255)        ctTTTCTTTACGGTCTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatc                                                                                                           <  1:241158/139‑1 (MQ=255)        ctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatc                                                                                                           <  3:317739/139‑1 (MQ=255)        ctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatc                                                                                                           <  4:25513/139‑1 (MQ=255)        ctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatc                                                                                                           <  7:100700/139‑1 (MQ=255)        ctTTTCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcat                                                                                                            >  4:358883/1‑138 (MQ=255)          tttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         >  1:290875/1‑139 (MQ=255)           ttCTTTGCGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         <  3:425524/138‑1 (MQ=255)           ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         <  1:412738/138‑1 (MQ=255)           ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         <  7:10046/138‑1 (MQ=255)           ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         <  1:126560/138‑1 (MQ=255)           ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         <  4:135951/138‑1 (MQ=255)           ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         <  3:251917/138‑1 (MQ=255)           ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         <  5:321801/138‑1 (MQ=255)           ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         <  3:184361/138‑1 (MQ=255)           ttCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGGCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         <  5:117284/138‑1 (MQ=255)           ttCTTTACGGACTTCTGAAATCATTTCAGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         <  1:161686/138‑1 (MQ=255)            tCTTTACGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcatc                                                                                                        <  1:384562/138‑1 (MQ=255)                taCGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         <  5:208609/132‑1 (MQ=255)                taCGGACTTCTGAAATCATTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTtcatcat                                                                                                         >  6:208609/2‑133 (MQ=255)                taCGGACTTCTGAAATCATTTACGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAAACTCAACATCCTCAAAATAGTTGGCAGCCATTTTTTAAAATTTAATCATAAgta                                                                                                    >  4:245296/2‑136 (MQ=255)                            aaaTCATTTCCGCTTGTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGGTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAgcgc                                                                                       <  2:153494/139‑1 (MQ=255)                                 aTTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCaaaat                                                                                  >  7:349450/1‑137 (MQ=255)                                 aTTTCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCaaaat                                                                                  >  8:72192/1‑137 (MQ=255)                                   ttCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAAttt                                                                                >  7:151637/1‑139 (MQ=255)                                   ttCCGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAAttt                                                                                >  1:36289/1‑139 (MQ=255)                                      cGCTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTggc                                                                             <  4:240520/139‑2 (MQ=255)                                        cTGTTTTAAGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGgcgc                                                                           <  2:96216/139‑1 (MQ=255)                                              taaGCGCAGTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCgatga                                                                      <  8:438626/136‑1 (MQ=255)                                                     agTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTcc                                                               >  2:149035/2‑138 (MQ=255)                                                     agTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTcc                                                               >  6:9732/2‑138 (MQ=255)                                                     agTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCg                                                              <  3:358883/138‑1 (MQ=255)                                                     agTTCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCg                                                              <  3:82903/138‑1 (MQ=255)                                                       ttCCGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCTCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGAt                                                            >  5:347756/1‑139 (MQ=255)                                                         ccGCTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGAtc                                                           <  3:69440/138‑2 (MQ=255)                                                            cTTGGTGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGCGCGCAAAATTTGGCGCGATGATGGCTCCGA‑TCCctt                                                      >  6:245617/1‑139 (MQ=255)                                                                 tGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCtttttct                                                  <  1:42407/139‑1 (MQ=255)                                                                 tGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCtttttct                                                  <  5:321494/139‑1 (MQ=255)                                                                 tGCGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCtttttct                                                  <  3:166552/139‑1 (MQ=255)                                                                   cGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCtttttcttc                                                >  2:8004/1‑139 (MQ=255)                                                                   cGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCtttttcttc                                                <  1:8004/139‑1 (MQ=255)                                                                   cGTCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCtttttctt                                                 <  3:267530/138‑1 (MQ=255)                                                                     tCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGAtc                                                           >  8:6301/1‑125 (MQ=255)                                                                     tCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGAtc                                                           <  7:6301/126‑2 (MQ=255)                                                                     tCAAGCTTCTGGTCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTAATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATTGCTCCGAGACCTTTTTCTTCTg                                              >  4:267530/1‑139 (MQ=255)                                                                             ctggtCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTGTGTTAAAGat                                      >  2:28701/5‑138 (MQ=255)                                                                              tggtCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGatg                                     >  2:372904/4‑137 (MQ=255)                                                                                gtCATGATGAAGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGat                                      <  5:157955/135‑2 (MQ=255)                                                                                   atgatgAAGCTCACTAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGc                                <  6:13823/139‑1 (MQ=255)                                                                                          aGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCgatga                                                                      >  5:43617/1‑94 (MQ=255)                                                                                          aGCTCAATAATCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCgatga                                                                      <  6:43617/94‑1 (MQ=255)                                                                                               aataatCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTa                                           >  4:60764/1‑116 (MQ=255)                                                                                               aataatCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTa                                           >  4:54796/1‑116 (MQ=255)                                                                                               aataatCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTa                                           <  3:60764/116‑1 (MQ=255)                                                                                               aataatCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTa                                           <  3:54796/116‑1 (MQ=255)                                                                                               aataatCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAAt                      <  2:40509/137‑1 (MQ=255)                                                                                               aataatCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAAt                      >  1:66193/1‑137 (MQ=255)                                                                                                 taatCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCtttttct                                                  <  4:344223/107‑1 (MQ=255)                                                                                                 taatCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCtttttct                                                  >  3:344223/1‑107 (MQ=255)                                                                                                 taatCTCAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAATCAGc                  <  3:286092/139‑1 (MQ=255)                                                                                                      tcAACATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCt              >  3:351243/1‑138 (MQ=255)                                                                                                        aaCATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCt              <  1:372904/136‑1 (MQ=255)                                                                                                         aCATCCTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTgag           >  1:340462/1‑138 (MQ=255)                                                                                                             ccTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAAcc      >  5:196194/1‑139 (MQ=255)                                                                                                             ccTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATAGCACCGAGCTCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAAcc      >  1:252267/1‑139 (MQ=255)                                                                                                              cTCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCCCCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAATATGTGAGCTCTTTTATATCAGCTTCTGAGAAAcag     >  7:277939/1‑137 (MQ=255)                                                                                                               tCAAAATAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGATACCgg    >  8:429855/1‑139 (MQ=255)                                                                                                                 aaaaTAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGgtt  <  6:171362/139‑1 (MQ=255)                                                                                                                 aaaaTAGTTGGCAGCCATTTTTGAAAATTTCATCATCAGTATCGCACCGAGCGCAAAATTTGGCGCGATGATGGCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGgtt  <  2:80995/139‑1 (MQ=255)                                                                                                                    |                                                                                                                                        CTTGCTGCTTTTCTTGACGGACTTCTGAAATCATTTCCGCTGTTTTCAGCGCCGTTCCGCTTGGTGCGTCAAGCTTCCGATCATGGTGTAGCTCAATAATCTCAACATCCTCAAAGTAGTTGGCAGCCATTTTCGAAAATTTCATCATCAGCACCGCACCAAGTGCAAAGTTTGGAGCGATGATGGCTCCGATTCCCTTCTCTTCTGTTAATGACGTAAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTT  >  CP006881/2177443‑2177693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑