| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,177,756 | A→G | P80P (CCT→CCC) | U712_10895 ← | Dihydrodipicolinate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,177,756 | 0 | A | G | 98.9% | 289.5 / NA | 90 | P80P (CCT→CCC) | U712_10895 | Dihydrodipicolinate reductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (45/44); minor base C (0/1); total (45/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGCTCCGATTCCCTTCTCTTCTGTTAATGACGTAAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCAACAACCGGACGAACGCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCAGGCGTTGTTAAATCAATTAAGACATCCGGCTGTGTTTCCGAAAAGCATGCACGGATATCTGTGTAAATGAGAGCATCTGACTCAACAGACATCACATCAGATAATTTTTGCTGGTCGTATGTATGGTCTATGGC > CP006881/2177627‑2177890 | ggCTCCGATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCgttgt > 5:330634/1‑138 (MQ=255) gATCCCTTTTTCTTCTGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATc > 8:315128/1‑138 (MQ=255) tcttctGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACa < 8:277939/138‑1 (MQ=255) tcttctGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACa < 6:330634/138‑1 (MQ=255) ttctGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATcc > 7:190762/1‑139 (MQ=255) ctGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCgg > 7:19357/1‑139 (MQ=255) gTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCggtt > 2:27647/1‑137 (MQ=255) gTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCggtt > 1:188936/1‑137 (MQ=255) gTTAAAGATGTGAGCTCTATTAAATCAGCTTATGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGAAATTTTAGTATCTACTTTTCCGATTACGTGAGTTCTTAAATAAATCAAGACATcctttt > 8:259935/1‑135 (MQ=255) gtgaGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTctg > 1:104830/4‑137 (MQ=255) gtgaGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTctg > 8:70708/4‑137 (MQ=255) tgaGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCggg < 4:299228/98‑1 (MQ=255) tgaGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCggg > 3:299228/3‑100 (MQ=255) gaGCTCTTTTAAATCAGCTTCTGAGAACCCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTctgt > 8:127798/2‑135 (MQ=255) gaGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTctgt > 7:199588/2‑135 (MQ=255) gaGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTctgt > 2:240173/2‑135 (MQ=255) gaGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATACGGTTGTGTATctgtc > 3:332393/2‑135 (MQ=255) aGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACa < 4:133873/120‑1 (MQ=255) aGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACa > 3:133873/1‑120 (MQ=255) ctctTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGtaaaa < 4:335915/139‑2 (MQ=255) ctctTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGtaaaa < 1:149035/139‑2 (MQ=255) ttttAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACag > 6:236259/1‑138 (MQ=255) ttAAATCAGCTTCTTAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACag < 6:312440/137‑2 (MQ=255) tAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGc < 1:27647/138‑1 (MQ=255) tAAATCAGCATCTGTGAAAGCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGc < 7:259935/138‑1 (MQ=255) gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCggg < 6:448326/83‑1 (MQ=255) gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCggg > 5:448326/1‑83 (MQ=255) gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCggt > 4:11321/1‑110 (MQ=255) gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCggt < 3:11321/111‑2 (MQ=255) gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGatat > 1:33208/1‑139 (MQ=255) gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGatat < 2:188936/139‑1 (MQ=255) gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGatat < 3:245296/139‑1 (MQ=255) gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGatat > 6:152576/1‑139 (MQ=255) gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGata > 3:192663/1‑138 (MQ=255) gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTATCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGatat < 1:379733/139‑1 (MQ=255) gCTTCTGAGAAACCGGGTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGatat < 8:259039/139‑1 (MQ=255) agaAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCtgtg < 8:151637/137‑1 (MQ=255) aCCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAAt > 1:81698/1‑138 (MQ=255) aCCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAAt > 3:181466/1‑138 (MQ=255) tgttCCGACAACTGGACGGACTCCGTCCTCAAATGCGATTTTTGTATGTACTTTTCCGATTTCGGCCGTTGTTAAATCAATCAAGACATCCGCTTGTGTTTCTGTAAAACAGGCATGGATATCTTTGTAAATCAAAGc > 2:44729/1‑138 (MQ=255) ttCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATc > 7:424879/1‑139 (MQ=255) acaacTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACt > 6:226011/1‑139 (MQ=255) actggacggacTCCGTGCTCTAATGCAAGTTTTGTATGTACTTTTCCGATTTCGGGCGTGGTTAACTCAAGCAAGACCTCCGGGTGTGTTTCTGTAAAACATGCATGGATATCTGTGTAAATGAAAGCATCTGACTCaa < 8:162556/136‑1 (MQ=255) gACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACa < 2:104830/137‑1 (MQ=255) cggactccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgca > 5:429452/7‑139 (MQ=255) ggactccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcat < 7:143352/134‑1 (MQ=255) actccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcatca > 8:43953/4‑139 (MQ=255) tccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcatcaca > 3:49594/2‑139 (MQ=255) ccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcatcacat > 1:59856/1‑139 (MQ=255) cGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcatcaca < 2:66193/137‑1 (MQ=255) ctAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATaa > 5:130640/1‑139 (MQ=255) aaTGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAAtt > 2:87460/1‑139 (MQ=255) cAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATga > 4:165073/1‑99 (MQ=255) cAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATga < 3:165073/99‑1 (MQ=255) cAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATga < 3:126979/99‑1 (MQ=255) cAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTg < 2:192981/139‑1 (MQ=255) cAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGATAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATga > 4:126979/1‑99 (MQ=255) aTTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCt > 8:55843/1‑139 (MQ=255) aTTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCt < 2:59856/139‑1 (MQ=255) aTTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTATTTTAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACACAACAGGCATAACATCACATAATTTTTTCt > 6:271182/1‑139 (MQ=255) tttttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGCCTCAACAGGCATCACATCAGATAATTTTTGCTg > 2:73502/1‑139 (MQ=255) tttttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTg > 1:341883/1‑139 (MQ=255) tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGc > 2:425957/1‑74 (MQ=255) tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGc < 1:425957/74‑1 (MQ=255) tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAg < 8:124840/124‑1 (MQ=255) tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAg > 7:124840/1‑124 (MQ=255) tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat > 5:169394/1‑137 (MQ=255) tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat > 1:336942/1‑137 (MQ=255) tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat > 1:238482/1‑137 (MQ=255) ttGTATGTACTTTTGCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat < 4:51985/138‑3 (MQ=255) ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat < 7:55843/138‑3 (MQ=255) ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat < 7:70708/138‑3 (MQ=255) ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat < 6:429452/138‑3 (MQ=255) ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat < 6:169394/138‑3 (MQ=255) ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat < 2:341883/138‑3 (MQ=255) ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat < 2:336942/138‑3 (MQ=255) ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGGTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGTAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat < 8:19357/138‑3 (MQ=255) tgtaCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat < 1:239031/133‑3 (MQ=255) tgtaCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat > 2:239031/1‑131 (MQ=255) tacagttCCGCTTTCCGGCGGGCGTAAATCAATCAAGACATCCGGTTGTGTTTCTCTAAAACACGCAAGGATAGCTGTGTAAATGAAAGCATCTGACTCACCAGGCAGCACATCAGATAATTTTTGCTGAGCctatgta < 4:245601/134‑1 (MQ=255) taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta < 1:240173/139‑1 (MQ=255) taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta < 2:216012/139‑1 (MQ=255) taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta < 7:429855/139‑1 (MQ=255) taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGGTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgt < 4:364994/138‑1 (MQ=255) taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGGTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta < 2:36289/139‑1 (MQ=255) tttCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGt > 1:8820/1‑139 (MQ=255) tCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTc > 7:381708/1‑138 (MQ=255) cGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTa < 5:236259/138‑1 (MQ=255) aTTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATgg < 7:375171/139‑1 (MQ=255) aTTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATgg < 4:49594/139‑1 (MQ=255) aTTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATgg > 2:79947/1‑139 (MQ=255) tttCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGc < 4:192663/139‑1 (MQ=255) tttCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGc < 2:199171/139‑1 (MQ=255) tttCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGGCTATGGc < 1:71260/139‑1 (MQ=255) | GGCTCCGATTCCCTTCTCTTCTGTTAATGACGTAAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCAACAACCGGACGAACGCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCAGGCGTTGTTAAATCAATTAAGACATCCGGCTGTGTTTCCGAAAAGCATGCACGGATATCTGTGTAAATGAGAGCATCTGACTCAACAGACATCACATCAGATAATTTTTGCTGGTCGTATGTATGGTCTATGGC > CP006881/2177627‑2177890 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |