Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,177,774	T→C	L74L (TTA→TTG)	U712_10895 ←	Dihydrodipicolinate reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,177,774	0	T	C	100.0%	292.1 / NA	89	L74L (TTA→TTG)	U712_10895	Dihydrodipicolinate reductase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (43/46);  total (43/46)

TCTTCTGTTAATGACGTAAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCAACAACCGGACGAACGCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCAGGCGTTGTTAAATCAATTAAGACATCCGGCTGTGTTTCCGAAAAGCATGCACGGATATCTGTGTAAATGAGAGCATCTGACTCAACAGACATCACATCAGATAATTTTTGCTGGTCGTATGTATGGTCTATGGCCCCGACA  >  CP006881/2177643‑2177897                                                                                                                                    |                                                                                                                            tcttctGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACa                                                                                                                       <  6:330634/138‑1 (MQ=255) tcttctGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACa                                                                                                                       <  8:277939/138‑1 (MQ=255)   ttctGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATcc                                                                                                                    >  7:190762/1‑139 (MQ=255)     ctGTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCgg                                                                                                                  >  7:19357/1‑139 (MQ=255)       gTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCggtt                                                                                                                >  2:27647/1‑137 (MQ=255)       gTTAAAGATGTGAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCggtt                                                                                                                >  1:188936/1‑137 (MQ=255)       gTTAAAGATGTGAGCTCTATTAAATCAGCTTATGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGAAATTTTAGTATCTACTTTTCCGATTACGTGAGTTCTTAAATAAATCAAGACATcctttt                                                                                                                >  8:259935/1‑135 (MQ=255)                gtgaGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTctg                                                                                                       >  1:104830/4‑137 (MQ=255)                gtgaGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTctg                                                                                                       >  8:70708/4‑137 (MQ=255)                  gaGCTCTTTTAAATCAGCTTCTGAGAACCCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTctgt                                                                                                      >  8:127798/2‑135 (MQ=255)                  gaGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTctgt                                                                                                      >  7:199588/2‑135 (MQ=255)                  gaGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTctgt                                                                                                      >  2:240173/2‑135 (MQ=255)                  gaGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATACGGTTGTGTATctgtc                                                                                                     >  3:332393/2‑135 (MQ=255)                   aGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACa                                                                                                                       <  4:133873/120‑1 (MQ=255)                   aGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACa                                                                                                                       >  3:133873/1‑120 (MQ=255)                     ctctTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGtaaaa                                                                                                  <  4:335915/139‑2 (MQ=255)                     ctctTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGtaaaa                                                                                                  <  1:149035/139‑2 (MQ=255)                        ttttAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACag                                                                                               >  6:236259/1‑138 (MQ=255)                          ttAAATCAGCTTCTTAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACag                                                                                               <  6:312440/137‑2 (MQ=255)                           tAAATCAGCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGc                                                                                             <  1:27647/138‑1 (MQ=255)                           tAAATCAGCATCTGTGAAAGCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGc                                                                                             <  7:259935/138‑1 (MQ=255)                                  gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCggt                                                                                                                 >  4:11321/1‑110 (MQ=255)                                  gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCggt                                                                                                                 <  3:11321/111‑2 (MQ=255)                                  gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGatat                                                                                     <  2:188936/139‑1 (MQ=255)                                  gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGatat                                                                                     <  3:245296/139‑1 (MQ=255)                                  gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGatat                                                                                     >  6:152576/1‑139 (MQ=255)                                  gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGatat                                                                                     >  1:33208/1‑139 (MQ=255)                                  gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGata                                                                                      >  3:192663/1‑138 (MQ=255)                                  gCTTCTGAGAAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTATCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGatat                                                                                     <  1:379733/139‑1 (MQ=255)                                  gCTTCTGAGAAACCGGGTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGatat                                                                                     <  8:259039/139‑1 (MQ=255)                                         agaAACCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCtgtg                                                                                <  8:151637/137‑1 (MQ=255)                                             aCCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAAt                                                                           >  1:81698/1‑138 (MQ=255)                                             aCCGGTTGTTCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAAt                                                                           >  3:181466/1‑138 (MQ=255)                                                   tgttCCGACAACTGGACGGACTCCGTCCTCAAATGCGATTTTTGTATGTACTTTTCCGATTTCGGCCGTTGTTAAATCAATCAAGACATCCGCTTGTGTTTCTGTAAAACAGGCATGGATATCTTTGTAAATCAAAGc                                                                     >  2:44729/1‑138 (MQ=255)                                                     ttCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATc                                                                  >  7:424879/1‑139 (MQ=255)                                                          acaacTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACt                                                             >  6:226011/1‑139 (MQ=255)                                                             actggacggacTCCGTGCTCTAATGCAAGTTTTGTATGTACTTTTCCGATTTCGGGCGTGGTTAACTCAAGCAAGACCTCCGGGTGTGTTTCTGTAAAACATGCATGGATATCTGTGTAAATGAAAGCATCTGACTCaa                                                          <  8:162556/136‑1 (MQ=255)                                                                 gACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACa                                                        <  2:104830/137‑1 (MQ=255)                                                                   cggactccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgca                                                    >  5:429452/7‑139 (MQ=255)                                                                    ggactccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcat                                                   <  7:143352/134‑1 (MQ=255)                                                                      actccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcatca                                                 >  8:43953/4‑139 (MQ=255)                                                                        tccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcatcaca                                               >  3:49594/2‑139 (MQ=255)                                                                         ccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcatcacat                                              >  1:59856/1‑139 (MQ=255)                                                                          cGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcatcaca                                               <  2:66193/137‑1 (MQ=255)                                                                                ctAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATaa                                       >  5:130640/1‑139 (MQ=255)                                                                                  aaTGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAAtt                                     >  2:87460/1‑139 (MQ=255)                                                                                      cAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATga                                                                         <  3:165073/99‑1 (MQ=255)                                                                                      cAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATga                                                                         >  4:165073/1‑99 (MQ=255)                                                                                      cAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATga                                                                         <  3:126979/99‑1 (MQ=255)                                                                                      cAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTg                                 <  2:192981/139‑1 (MQ=255)                                                                                      cAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGATAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATga                                                                         >  4:126979/1‑99 (MQ=255)                                                                                        aTTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCt                               >  8:55843/1‑139 (MQ=255)                                                                                        aTTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCt                               <  2:59856/139‑1 (MQ=255)                                                                                        aTTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTATTTTAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACACAACAGGCATAACATCACATAATTTTTTCt                               >  6:271182/1‑139 (MQ=255)                                                                                         tttttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGCCTCAACAGGCATCACATCAGATAATTTTTGCTg                              >  2:73502/1‑139 (MQ=255)                                                                                         tttttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTg                              >  1:341883/1‑139 (MQ=255)                                                                                           tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGc                                                                                             <  1:425957/74‑1 (MQ=255)                                                                                           tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGc                                                                                             >  2:425957/1‑74 (MQ=255)                                                                                           tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAg                                           <  8:124840/124‑1 (MQ=255)                                                                                           tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAg                                           >  7:124840/1‑124 (MQ=255)                                                                                           tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            >  1:336942/1‑137 (MQ=255)                                                                                           tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            >  1:238482/1‑137 (MQ=255)                                                                                           tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            >  5:169394/1‑137 (MQ=255)                                                                                            ttGTATGTACTTTTGCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            <  4:51985/138‑3 (MQ=255)                                                                                            ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            <  6:169394/138‑3 (MQ=255)                                                                                            ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            <  6:429452/138‑3 (MQ=255)                                                                                            ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            <  2:336942/138‑3 (MQ=255)                                                                                            ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            <  7:70708/138‑3 (MQ=255)                                                                                            ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            <  7:55843/138‑3 (MQ=255)                                                                                            ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            <  2:341883/138‑3 (MQ=255)                                                                                            ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGGTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGTAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            <  8:19357/138‑3 (MQ=255)                                                                                                 tgtaCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            <  1:239031/133‑3 (MQ=255)                                                                                                 tgtaCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                            >  2:239031/1‑131 (MQ=255)                                                                                                   tacagttCCGCTTTCCGGCGGGCGTAAATCAATCAAGACATCCGGTTGTGTTTCTCTAAAACACGCAAGGATAGCTGTGTAAATGAAAGCATCTGACTCACCAGGCAGCACATCAGATAATTTTTGCTGAGCctatgta                    <  4:245601/134‑1 (MQ=255)                                                                                                   taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta                    <  2:216012/139‑1 (MQ=255)                                                                                                   taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta                    <  1:240173/139‑1 (MQ=255)                                                                                                   taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta                    <  7:429855/139‑1 (MQ=255)                                                                                                   taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGGTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgt                     <  4:364994/138‑1 (MQ=255)                                                                                                   taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGGTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta                    <  2:36289/139‑1 (MQ=255)                                                                                                       tttCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGt                >  1:8820/1‑139 (MQ=255)                                                                                                         tCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTc               >  7:381708/1‑138 (MQ=255)                                                                                                           cGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTa             <  5:236259/138‑1 (MQ=255)                                                                                                             aTTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATgg          <  4:49594/139‑1 (MQ=255)                                                                                                             aTTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATgg          <  7:375171/139‑1 (MQ=255)                                                                                                             aTTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATgg          >  2:79947/1‑139 (MQ=255)                                                                                                              tttCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGc         <  4:192663/139‑1 (MQ=255)                                                                                                              tttCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGc         <  2:199171/139‑1 (MQ=255)                                                                                                              tttCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGGCTATGGc         <  1:71260/139‑1 (MQ=255)                                                                                                                     cGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACa  <  5:226011/139‑1 (MQ=255)                                                                                                                                    |                                                                                                                            TCTTCTGTTAATGACGTAAGCTCTTTTAAATCAGCTTCTGAGAAACCGGTTGTTCCAACAACCGGACGAACGCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCAGGCGTTGTTAAATCAATTAAGACATCCGGCTGTGTTTCCGAAAAGCATGCACGGATATCTGTGTAAATGAGAGCATCTGACTCAACAGACATCACATCAGATAATTTTTGCTGGTCGTATGTATGGTCTATGGCCCCGACA  >  CP006881/2177643‑2177897

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑