Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,177,827	G→A	L57F (CTC→TTC)	U712_10895 ←	Dihydrodipicolinate reductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,177,827	0	G	A	100.0%	245.9 / NA	78	L57F (CTC→TTC)	U712_10895	Dihydrodipicolinate reductase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (39/39);  total (39/39)

TGTTCCAACAACCGGACGAACGCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCAGGCGTTGTTAAATCAATTAAGACATCCGGCTGTGTTTCCGAAAAGCATGCACGGATATCTGTGTAAATGAGAGCATCTGACTCAACAGACATCACATCAGATAATTTTTGCTGGTCGTATGTATGGTCTATGGCCCCGACAAGGTCAAAATGAGGTGTTCGTTCTGTCAATTTAACAGCTTCTTGCCCCATTCTTCCACGCGGTC  >  CP006881/2177693‑2177961                                                                                                                                       |                                                                                                                                       tgttCCGACAACTGGACGGACTCCGTCCTCAAATGCGATTTTTGTATGTACTTTTCCGATTTCGGCCGTTGTTAAATCAATCAAGACATCCGCTTGTGTTTCTGTAAAACAGGCATGGATATCTTTGTAAATCAAAGc                                                                                                                                     >  2:44729/1‑138 (MQ=255)   ttCCGACAACTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATc                                                                                                                                  >  7:424879/1‑139 (MQ=255)        acaacTGGACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACt                                                                                                                             >  6:226011/1‑139 (MQ=255)           actggacggacTCCGTGCTCTAATGCAAGTTTTGTATGTACTTTTCCGATTTCGGGCGTGGTTAACTCAAGCAAGACCTCCGGGTGTGTTTCTGTAAAACATGCATGGATATCTGTGTAAATGAAAGCATCTGACTCaa                                                                                                                          <  8:162556/136‑1 (MQ=255)               gACGGACTCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACa                                                                                                                        <  2:104830/137‑1 (MQ=255)                 cggactccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgca                                                                                                                    >  5:429452/7‑139 (MQ=255)                  ggactccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcat                                                                                                                   <  7:143352/134‑1 (MQ=255)                    actccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcatca                                                                                                                 >  8:43953/4‑139 (MQ=255)                      tccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcatcaca                                                                                                               >  3:49594/2‑139 (MQ=255)                       ccGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcatcacat                                                                                                              >  1:59856/1‑139 (MQ=255)                        cGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGgcatcaca                                                                                                               <  2:66193/137‑1 (MQ=255)                              ctAATGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATaa                                                                                                       >  5:130640/1‑139 (MQ=255)                                aaTGCAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAAtt                                                                                                     >  2:87460/1‑139 (MQ=255)                                    cAATTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTg                                                                                                 <  2:192981/139‑1 (MQ=255)                                      aTTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCt                                                                                               >  8:55843/1‑139 (MQ=255)                                      aTTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCt                                                                                               <  2:59856/139‑1 (MQ=255)                                      aTTTTTGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTATTTTAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACACAACAGGCATAACATCACATAATTTTTTCt                                                                                               >  6:271182/1‑139 (MQ=255)                                       tttttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGCCTCAACAGGCATCACATCAGATAATTTTTGCTg                                                                                              >  2:73502/1‑139 (MQ=255)                                       tttttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTg                                                                                              >  1:341883/1‑139 (MQ=255)                                         tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAg                                                                                                           >  7:124840/1‑124 (MQ=255)                                         tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAg                                                                                                           <  8:124840/124‑1 (MQ=255)                                         tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            >  5:169394/1‑137 (MQ=255)                                         tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            >  1:238482/1‑137 (MQ=255)                                         tttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            >  1:336942/1‑137 (MQ=255)                                          ttGTATGTACTTTTGCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            <  4:51985/138‑3 (MQ=255)                                          ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            <  2:341883/138‑3 (MQ=255)                                          ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            <  7:70708/138‑3 (MQ=255)                                          ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            <  7:55843/138‑3 (MQ=255)                                          ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            <  6:429452/138‑3 (MQ=255)                                          ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            <  2:336942/138‑3 (MQ=255)                                          ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            <  6:169394/138‑3 (MQ=255)                                          ttGTATGTACTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGGTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGTAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            <  8:19357/138‑3 (MQ=255)                                               tgtaCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            <  1:239031/133‑3 (MQ=255)                                               tgtaCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTgat                                                                                            >  2:239031/1‑131 (MQ=255)                                                 tacagttCCGCTTTCCGGCGGGCGTAAATCAATCAAGACATCCGGTTGTGTTTCTCTAAAACACGCAAGGATAGCTGTGTAAATGAAAGCATCTGACTCACCAGGCAGCACATCAGATAATTTTTGCTGAGCctatgta                                                                                    <  4:245601/134‑1 (MQ=255)                                                 taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta                                                                                    <  1:240173/139‑1 (MQ=255)                                                 taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta                                                                                    <  7:429855/139‑1 (MQ=255)                                                 taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta                                                                                    <  2:216012/139‑1 (MQ=255)                                                 taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGGTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgt                                                                                     <  4:364994/138‑1 (MQ=255)                                                 taCTTTTCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGGTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta                                                                                    <  2:36289/139‑1 (MQ=255)                                                     tttCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGt                                                                                >  1:8820/1‑139 (MQ=255)                                                       tCCGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTc                                                                               >  7:381708/1‑138 (MQ=255)                                                         cGATTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTa                                                                             <  5:236259/138‑1 (MQ=255)                                                           aTTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATgg                                                                          >  2:79947/1‑139 (MQ=255)                                                           aTTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATgg                                                                          <  7:375171/139‑1 (MQ=255)                                                           aTTTCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATgg                                                                          <  4:49594/139‑1 (MQ=255)                                                            tttCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGc                                                                         <  4:192663/139‑1 (MQ=255)                                                            tttCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGc                                                                         <  2:199171/139‑1 (MQ=255)                                                            tttCGGGCGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGGCTATGGc                                                                         <  1:71260/139‑1 (MQ=255)                                                                   cGTTGTTAAATCAATCAAGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACa                                                                  <  5:226011/139‑1 (MQ=255)                                                                                atcaaGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTTAATGAAAGCATCTGCCTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATgtg                                                     >  8:193510/4‑137 (MQ=255)                                                                                atcaaGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgtat                                                                                   <  7:353606/106‑1 (MQ=255)                                                                                atcaaGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgtat                                                                                   >  8:353606/4‑109 (MQ=255)                                                                                   aaGACATCCGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATgtggtg                                                  <  6:130640/139‑1 (MQ=255)                                                                                          ccGGTTGTGTTTATGTAAAAAATGCAGTGATATCTGTGTAAATGAAAGCATATGACGCAAAAGGCATCACATCAGATAATTTTTGCTGCTCGTATTTATTGTATATGGCACCTACACTGTCAAAAATTTGTgttcgtga                                           >  4:233012/1‑137 (MQ=255)                                                                                           cGGTTGTGTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCt                                          <  1:79947/139‑1 (MQ=255)                                                                                               tgtgTTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTgcc                                       >  6:144048/1‑136 (MQ=255)                                                                                                 tgtTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta                                                                                    >  8:354218/1‑91 (MQ=255)                                                                                                 tgtTTCTGTAAAACAGGCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCgtatgta                                                                                    <  7:354218/91‑1 (MQ=255)                                                                                                            aacaggCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGcttc                         >  4:177516/6‑139 (MQ=255)                                                                                                            aacaggCATGGATATCTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGcttc                         <  5:271182/134‑1 (MQ=255)                                                                                                                    tggATATCTGTGTAAATGAAAGCAGCTGACTCAACAGGCATCACATCAGATAAATTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGCTTCCTGCCCCa                 <  7:276627/138‑1 (MQ=255)                                                                                                                           cTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCt                                          <  6:96624/107‑1 (MQ=255)                                                                                                                           cTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCt                                          >  5:96624/1‑107 (MQ=255)                                                                                                                           cTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGCTTCCTGCCCCAttcttc           >  1:418116/1‑138 (MQ=255)                                                                                                                           cTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGCTTCCTGCCCCATTCTTcc          >  3:414870/1‑139 (MQ=255)                                                                                                                           cTGTGTAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAAGTTAACAGCTTCCTGCCCCATTCTTcc          >  1:404338/1‑139 (MQ=255)                                                                                                                            tgtgTAAATGAAAGCATCTGACTCCACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGGTCGTTCTGCCAATTTACCAGCTTCCTGCCCCAGTCTTCCa         >  3:200293/1‑139 (MQ=255)                                                                                                                              tgtAAATGAAAGGATCTGACTCAAGAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGCTTCCTGCCCGATTCTTCCAcg       <  3:379404/139‑1 (MQ=255)                                                                                                                                tAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGCTTCCTGCCCCATTCTTCCAcgcg     >  7:333016/1‑139 (MQ=255)                                                                                                                                tAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGCTTCCTGCCCCATTCTTCCAcgcg     >  8:342011/1‑139 (MQ=255)                                                                                                                                tAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGCTTCCTGCCCCATTCTTCCAcgcg     >  5:432754/1‑139 (MQ=255)                                                                                                                                tAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGCTTCCTGCCCCATTCTTCCAcg       <  1:289148/137‑1 (MQ=255)                                                                                                                                tAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGCTTCCTGCCCCATTCTTCCAcg       >  2:289148/1‑137 (MQ=255)                                                                                                                                tAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGCTTCCTGACCCATTCTTCCAcgcg     >  1:82038/1‑139 (MQ=255)                                                                                                                                tAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCCACAAGGTCAAAATGTGGTGTTCGTTCt                                          >  6:286862/1‑102 (MQ=255)                                                                                                                                tAAATGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCCACAAGGTCAAAATGTGGTGTTCGTTCt                                          <  5:286862/102‑1 (MQ=255)                                                                                                                                   aTGAAAGCATCTGACTCAACAGGCATCACATCAGATAATTTTTGCTGATCGTATGTATGGTCTATGGCCCCTACAAGGTCAAAATGTGGTGTTCGTTCTGCCAATTTAACAGCTTCCTGCCCCATTCTTCCACGCGGTc  >  4:373210/1‑139 (MQ=255)                                                                                                                                       |                                                                                                                                       TGTTCCAACAACCGGACGAACGCCGTGCTCTAATGCAATTTTTGTATGTACTTTTCCGATTTCAGGCGTTGTTAAATCAATTAAGACATCCGGCTGTGTTTCCGAAAAGCATGCACGGATATCTGTGTAAATGAGAGCATCTGACTCAACAGACATCACATCAGATAATTTTTGCTGGTCGTATGTATGGTCTATGGCCCCGACAAGGTCAAAATGAGGTGTTCGTTCTGTCAATTTAACAGCTTCTTGCCCCATTCTTCCACGCGGTC  >  CP006881/2177693‑2177961

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑