Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,178,559 C→T H26H (CAC→CAT)  U712_10905 → UPF0750 membrane protein ypjC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,178,5590CT100.0% 360.6 / NA 113H26H (CAC→CAT) U712_10905UPF0750 membrane protein ypjC
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (56/57);  total (56/57)

Only 100 of 113 total aligned reads displayed.

TTTTCATCCACTATAATATAAACGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCAGCAATTTTTTCATTTGGCTTGGTTCACTTCAATATGCAAAACAATCTGGCTGAGGGCGGTTTTACAGGCATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATCTCGAACCTGGTTTTGAACATTCCGATCTTTTTTATCGGCTGGCGTTTG  >  CP006881/2178426‑2178694
                                                                                                                                     |                                                                                                                                       
ttttCATCCACTATAATATAAACGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCa                                                                                                                                     <  4:339276/138‑1 (MQ=255)
 tttCATCCACTATAATATAAACGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCa                                                                                                                                     <  8:375405/137‑1 (MQ=255)
 tttCATCCACTATAATATAAACGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCa                                                                                                                                     <  8:215714/137‑1 (MQ=255)
    cATCCACTATAATATAAACGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATg                                                                                                                                >  3:26049/1‑139 (MQ=255)
         aCTATAATATAAACGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCagaa                                                                                                                           <  8:189440/139‑1 (MQ=255)
          cTATAATATAAACGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAAc                                                                                                                          <  3:228454/139‑1 (MQ=255)
                  taaACGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGc                                                                                                                  >  4:27120/1‑139 (MQ=255)
                   aaaCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  3:238582/1‑139 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCTGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  7:375052/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCTTTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  8:442495/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATTCAGAACAATCTGGCt                                                                                                                 >  6:411436/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCagaa                                                                                                                           <  6:70465/127‑1 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCagaa                                                                                                                           >  5:70465/1‑127 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCag                                                                                                                             >  3:4854/1‑124 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCag                                                                                                                             <  4:4854/125‑2 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  3:179130/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  1:232776/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  8:246650/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  4:297913/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  4:176654/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  1:9721/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  2:4279/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  6:301895/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  2:387046/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  4:65686/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  3:181900/1‑137 (MQ=255)
                     aCGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCt                                                                                                                 >  7:106312/1‑137 (MQ=255)
                      cGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAg                                                                                                              <  3:27120/139‑1 (MQ=255)
                        cTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAggg                                                                                                            <  8:245673/139‑1 (MQ=255)
                          aTCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCTATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCg                                                                                                          >  4:249727/1‑139 (MQ=255)
                          aTCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAAAAATCTGGCTGAGGGCg                                                                                                          >  2:432214/1‑139 (MQ=255)
                           tCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTGGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCgg                                                                                                         >  1:138457/1‑139 (MQ=255)
                           tCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGc                                                                                                           <  5:301895/137‑1 (MQ=255)
                           tCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGc                                                                                                           <  4:238582/137‑1 (MQ=255)
                           tCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCgg                                                                                                         >  6:403824/1‑139 (MQ=255)
                           tCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATATTTTCATTTGGCTTTGTTCATTTCAATATGCAGAACAATCTGGCTGAGGTCgg                                                                                                         >  3:126504/1‑139 (MQ=255)
                                  gaaggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTAc                                                                                                   <  6:142277/138‑1 (MQ=255)
                                  gaaggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTAc                                                                                                   <  6:440967/138‑1 (MQ=255)
                                  gaaggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTAc                                                                                                   <  4:26049/138‑1 (MQ=255)
                                  gaaggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACa                                                                                                  <  3:65686/139‑1 (MQ=255)
                                     ggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTTGCTGAGGGCGGTTTTAc                                                                                                   >  1:433513/1‑135 (MQ=255)
                                     ggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTAc                                                                                                   <  2:433513/135‑1 (MQ=255)
                                     ggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTAc                                                                                                   <  7:188452/135‑1 (MQ=255)
                                     ggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTAc                                                                                                   >  8:188452/1‑135 (MQ=255)
                                     ggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAggt                                                                                               >  8:444616/1‑138 (MQ=255)
                                     ggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAgg                                                                                                >  5:282040/1‑138 (MQ=255)
                                     ggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAgg                                                                                                >  5:305018/1‑138 (MQ=255)
                                     ggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAgg                                                                                                >  6:284564/1‑138 (MQ=255)
                                     ggaaAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGCCAATTTTTTCATTTGGATTGGTTCATTTCAATATGCTAAACAATATGGCTGAGGGAGGTTTTACAgg                                                                                                >  8:425833/1‑138 (MQ=255)
                                      gaaAAGGGGTTTTGTGTGATGCTTGTAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGAAGAACAATCT‑GCATACGGCGGTTTTACAGGTAt                                                                                             >  3:446816/1‑139 (MQ=255)
                                       aaaaGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTGATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTAt                                                                                             >  8:5964/1‑139 (MQ=255)
                                       aaaaGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTAt                                                                                             <  3:14567/139‑1 (MQ=255)
                                         aaGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTa                                                                                           >  1:358861/1‑139 (MQ=255)
                                         aaGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTa                                                                                           <  2:276404/139‑1 (MQ=255)
                                          aGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTa                                                                                           >  4:310825/1‑138 (MQ=255)
                                              gTTTTGTGTGTTTCTTGGTGAAATTATATTAAAAAACATTTTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTTTTACACtt                                                                                      <  7:425833/139‑1 (MQ=255)
                                              gTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACtt                                                                                      <  7:123105/139‑1 (MQ=255)
                                              gTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACtt                                                                                      <  5:411436/139‑1 (MQ=255)
                                                tttGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACtttt                                                                                    >  3:190617/1‑139 (MQ=255)
                                                 ttGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCATTATGCAGAACATTCTGGCTGAGGGCGGTTTTACAGGTTTTACACTTTTg                                                                                   >  5:360432/1‑139 (MQ=255)
                                                 ttGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACtttt                                                                                    <  1:248116/138‑1 (MQ=255)
                                                 ttGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTg                                                                                   >  1:106471/1‑139 (MQ=255)
                                                 ttGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTg                                                                                   >  1:124905/1‑139 (MQ=255)
                                                    tgtgATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCATGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGGTTTACAGGTATTACACTTTTGCtt                                                                                <  7:369390/139‑1 (MQ=255)
                                                      tgctGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTa                                                                              <  1:444063/136‑1 (MQ=255)
                                                      tgATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCttt                                                                               <  8:106312/138‑1 (MQ=255)
                                                        aTGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATg                                                                            >  5:81030/1‑139 (MQ=255)
                                                         tGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTAATTTTGCTTGGTTAATTTCAATATGCAGAAAAATCAGGCTTAGGGCGTTTTTACAGGTATTACCCATTTTCTTTATGc                                                                           >  2:408204/1‑139 (MQ=255)
                                                           cTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGcc                                                                          <  2:405846/138‑1 (MQ=255)
                                                                agaAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTc                                                                    <  1:387046/139‑1 (MQ=255)
                                                                agaAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTc                                                                    <  4:127736/139‑1 (MQ=255)
                                                                  aaaTTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAggg                                                                                                            >  6:34469/1‑97 (MQ=255)
                                                                  aaaTTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAggg                                                                                                            <  5:34469/97‑1 (MQ=255)
                                                                        gATTAACATACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAg                                                            <  1:432821/139‑1 (MQ=255)
                                                                        gATTAAAAAACATATTTTTTATTTTAATCGGAGCGTCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAg                                                            <  5:403824/139‑1 (MQ=255)
                                                                        gATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAg                                                            <  8:375052/139‑1 (MQ=255)
                                                                        gATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAg                                                            <  5:284564/139‑1 (MQ=255)
                                                                        gATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAg                                                            <  8:104861/139‑1 (MQ=255)
                                                                        gATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAg                                                            <  7:69200/139‑1 (MQ=255)
                                                                        gATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAg                                                            <  2:138457/139‑1 (MQ=255)
                                                                        gATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAg                                                            <  2:232776/139‑1 (MQ=255)
                                                                        gATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAg                                                            <  4:181900/139‑1 (MQ=255)
                                                                        gATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAg                                                            <  2:380182/139‑1 (MQ=255)
                                                                        gATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAg                                                            <  5:90127/139‑1 (MQ=255)
                                                                        gATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAg                                                            <  5:198082/139‑1 (MQ=255)
                                                                             aaaaaCATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCct                                                       <  3:326188/139‑1 (MQ=255)
                                                                             aaaaaCATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCct                                                       <  1:4279/139‑1 (MQ=255)
                                                                              aaaaCATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCctc                                                      >  8:411819/1‑139 (MQ=255)
                                                                                          ttattttaATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAAcc                                           <  7:196615/138‑1 (MQ=255)
                                                                                          ttattttaATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAAcc                                           <  2:9721/138‑1 (MQ=255)
                                                                                          ttattttaATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAAcc                                           <  3:297913/138‑1 (MQ=255)
                                                                                          ttattttaATCGGAGCGGAAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAAcc                                           <  1:408204/138‑1 (MQ=255)
                                                                                            attttaATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTa                                                                                           >  2:279161/1‑88 (MQ=255)
                                                                                            attttaATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTa                                                                                           <  1:279161/88‑1 (MQ=255)
                                                                                            attttaATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTg                                         <  2:358861/138‑1 (MQ=255)
                                                                                               ttaATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGtgt                                     >  4:137845/1‑137 (MQ=255)
                                                                                                            caATTTTTTCATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGGCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGAt                        >  7:201572/1‑139 (MQ=255)
                                                                                                                     cATTTGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTa                <  3:11788/138‑1 (MQ=255)
                                                                                                                         tGGCTTGGTTCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGc           >  3:44379/1‑139 (MQ=255)
                                                                                                                                  tCATTTCAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTg  <  3:120746/139‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                       
TTTTCATCCACTATAATATAAACGCTATCTAATGGAAGGAAAAGGGGTTTTGTGTGATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCAGCAATTTTTTCATTTGGCTTGGTTCACTTCAATATGCAAAACAATCTGGCTGAGGGCGGTTTTACAGGCATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATCTCGAACCTGGTTTTGAACATTCCGATCTTTTTTATCGGCTGGCGTTTG  >  CP006881/2178426‑2178694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑