| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,178,697 | T→C | L72L (CTT→CTC) | U712_10905 → | UPF0750 membrane protein ypjC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,178,697 | 0 | T | C | 99.0% | 325.7 / NA | 101 | L72L (CTT→CTC) | U712_10905 | UPF0750 membrane protein ypjC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (52/48); minor base A (1/0); total (53/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 101 total aligned reads displayed.
CAATATGCAAAACAATCTGGCTGAGGGCGGTTTTACAGGCATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATCTCGAACCTGGTTTTGAACATTCCGATCTTTTTTATCGGCTGGCGTTTGCTTGGCAGAACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCCTGT‑CTTTGTTCCTCAGCATTTTTCAGCGATATGAAATACATATGCCTCTTCAGCACGACTTAGCGCT > CP006881/2178562‑2178807 | cAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCgg < 7:344537/138‑1 (MQ=255) tGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAgga < 1:432214/138‑3 (MQ=255) tGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAgga < 7:411819/138‑3 (MQ=255) agaaCAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAt > 7:186711/3‑139 (MQ=255) aaCAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgt > 3:9181/1‑139 (MQ=255) aaCAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgt > 1:302841/1‑139 (MQ=255) aaCAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgt < 2:204121/139‑1 (MQ=255) aaCAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGGTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgt < 7:5964/139‑1 (MQ=255) aaCAATCTGGCTGAGGGCGGATTTACAGGTATTACACTTTTGCTTTATGCGCTTTTCCACATCAGCCCATCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTTCTCGGCAGGACAAtgt < 5:366613/139‑1 (MQ=255) aCAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgtt < 1:71702/139‑1 (MQ=255) tCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCgg > 8:204583/1‑123 (MQ=255) tCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCgg < 7:204583/123‑1 (MQ=255) tCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgtt > 8:27095/1‑135 (MQ=255) tCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgtt < 7:27095/135‑1 (MQ=255) tGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTta < 4:9181/139‑1 (MQ=255) gCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCCCATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTta < 2:119282/137‑1 (MQ=255) gCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTta < 4:44379/137‑1 (MQ=255) aGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCt > 3:199588/1‑139 (MQ=255) ggCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTg > 1:52024/1‑139 (MQ=255) gCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGt < 2:106471/139‑1 (MQ=255) gTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTTGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCgg < 6:305018/139‑1 (MQ=255) gTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCgg < 3:54902/139‑1 (MQ=255) ttACAGGTATTACTCTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCa < 2:124905/138‑1 (MQ=255) taTTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATAACCTTGTCGGCACTGTAGcc > 1:157441/2‑139 (MQ=255) aTTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGCCAATGTTTGTTTATACACTTGTCGGCACTGTTGcgt > 5:37690/1‑137 (MQ=255) aTTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgt > 1:318612/1‑109 (MQ=255) aTTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgt < 2:318612/109‑1 (MQ=255) aTTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGcct > 7:42640/1‑138 (MQ=255) aTTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGcct > 4:184457/1‑138 (MQ=255) aTTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTAGGCAGGACAATGTTTGTTTTTACCCTTGTCGGCACTGTAGcct > 6:367357/1‑138 (MQ=255) ttACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTATATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGcctt < 6:282040/139‑3 (MQ=255) cTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGGTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑Ctt < 4:126504/139‑1 (MQ=255) ttGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgtt > 5:431668/1‑101 (MQ=255) ttGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgtt < 6:431668/101‑1 (MQ=255) ttGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgtct > 8:404323/1‑100 (MQ=255) ttGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAAtgtct < 7:404323/102‑3 (MQ=255) ttGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATCCCCTTGTCGGCCCTGTAGCCTTGT‑CTTTGt > 6:301424/1‑139 (MQ=255) ttGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCgg > 4:111391/1‑119 (MQ=255) ttGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCgg < 3:111391/119‑1 (MQ=255) ttGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑GTTTGt > 2:191260/1‑139 (MQ=255) ttGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGt > 4:218492/1‑139 (MQ=255) ttGCTTTATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGt > 5:21917/1‑139 (MQ=255) tATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCt < 4:446816/137‑1 (MQ=255) tATGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCt > 7:46255/1‑137 (MQ=255) tGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCATGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAg < 8:42640/138‑1 (MQ=255) tGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAg < 8:186711/138‑1 (MQ=255) tGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAg > 5:220027/1‑138 (MQ=255) tGCCCTTTTCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAg > 5:134489/1‑138 (MQ=255) ttttCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCAtctt > 3:197525/1‑139 (MQ=255) ttttCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCAtctt > 3:165710/1‑139 (MQ=255) ttttCCACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCAtctt > 3:263733/1‑139 (MQ=255) ccACATCAGCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTTTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCa < 7:442495/138‑1 (MQ=255) gCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCg > 4:394265/1‑133 (MQ=255) gCCCCTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCg < 3:394265/133‑1 (MQ=255) ccccTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGaa < 7:162323/139‑1 (MQ=255) ccccTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGa > 1:270824/1‑138 (MQ=255) cccTCTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGaaa < 3:184457/139‑1 (MQ=255) ctATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTACTCAGCATCTTTAATCGATATTAAAtcc > 8:162323/1‑136 (MQ=255) ctATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTCGTGCTTTTTTCCTCAGCATCTTTAAGCGATATTAAAtc > 2:74057/1‑137 (MQ=255) tatcGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGCCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCa < 7:246650/134‑1 (MQ=255) tcGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATg < 4:199588/138‑1 (MQ=255) tcGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGAGATGAAATCCAGATGc > 3:422461/1‑139 (MQ=255) gAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCg < 8:418388/120‑1 (MQ=255) gAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCg > 7:418388/1‑120 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGTCACTGTAGCCTTGT‑CTTTGTTCCGCAGCATCTTTCAGCGATATGAAATCCATATGcccc > 7:428715/1‑137 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGTGCTTTGTGCCTCGGCATCTTACACCGATATTAAATCAATATGccc > 2:60543/1‑138 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGaa > 8:335352/1‑126 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGaa < 7:335352/126‑1 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAAt > 3:341298/1‑128 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAAt < 4:341298/128‑1 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCGTATGcccc > 5:265426/1‑137 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGcccc > 3:220557/1‑137 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGcccc > 7:89704/1‑137 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGcccc > 5:212977/1‑137 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGAGATATTAAATCCATATGccc > 7:418448/1‑137 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGAATCTTTCAGCGATATGAAATCCATATGccc > 2:356263/1‑137 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTCGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGcccc < 1:74057/139‑3 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCGCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGcccc < 5:367357/139‑3 (MQ=255) aaCCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCGCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CGTTGTTCCGCAGCCTAGTTCAGCGATATGAAATCCATATGcccc > 6:286272/1‑137 (MQ=255) ggTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCgg < 2:123457/75‑1 (MQ=255) ggTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCgg > 1:123457/1‑75 (MQ=255) ggTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGc > 5:213851/1‑131 (MQ=255) ggTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGc < 6:213851/131‑1 (MQ=255) ggTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAg > 4:301475/1‑139 (MQ=255) tgttGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCa < 2:52024/137‑1 (MQ=255) tgttGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCa < 6:220027/137‑1 (MQ=255) tgttGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCa < 6:134489/137‑1 (MQ=255) tgttGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATAAGAAATCCATATGCCCCTTCAGCa < 4:190617/137‑1 (MQ=255) tgttGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGG‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCa < 5:222682/137‑1 (MQ=255) tgttGAACATTCCGATTTTTTTTATTGGCGGGCGTGTGCTCGGCAGGACAATGGTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCa < 3:249727/137‑1 (MQ=255) aaCATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCtt < 3:242896/129‑1 (MQ=255) aaCATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCtt > 4:242896/1‑129 (MQ=255) tCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGc > 7:224109/1‑119 (MQ=255) tCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGc < 8:224109/119‑1 (MQ=255) tCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAgcg > 6:220165/1‑139 (MQ=255) tCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAgcg > 8:287760/1‑139 (MQ=255) tCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAgcg > 3:407925/1‑139 (MQ=255) tCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAgcg > 1:62018/1‑139 (MQ=255) tCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATAAGCCCCTTCAGCACGACTTAgcg > 4:62438/1‑139 (MQ=255) cGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGT‑CTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGcgct < 2:302841/139‑1 (MQ=255) | CAATATGCAAAACAATCTGGCTGAGGGCGGTTTTACAGGCATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCTCTATCTCGAACCTGGTTTTGAACATTCCGATCTTTTTTATCGGCTGGCGTTTGCTTGGCAGAACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCCTGT‑CTTTGTTCCTCAGCATTTTTCAGCGATATGAAATACATATGCCTCTTCAGCACGACTTAGCGCT > CP006881/2178562‑2178807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |