Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 1,963,346 A→G V1181A (GTA→GCA)  U712_09710 ← Glutamate synthase [NADPH] large chain

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068811,963,3460AG100.0% 317.3 / NA 96V1181A (GTA→GCA) U712_09710Glutamate synthase [NADPH] large chain
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (48/48);  total (48/48)

AATTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTACATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCATATAGTTCACAATATGGTCAGGATCTCCCATGAACTTTT  >  CP006881/1963210‑1963478
                                                                                                                                        |                                                                                                                                    
aaTTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  4:168312/139‑1 (MQ=255)
aaTTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  3:417088/139‑1 (MQ=255)
aaTTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  7:260774/139‑1 (MQ=255)
aaTTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  3:316899/139‑1 (MQ=255)
aaTTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  3:174918/139‑1 (MQ=255)
aaTTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  8:351142/139‑1 (MQ=255)
aaTTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  8:209029/139‑1 (MQ=255)
 tttgtttTAATATATAGTTATTTATAAATTTTATGATTTTGCGGCGATTGGAACGGCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  5:50027/137‑1 (MQ=255)
 aTTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  3:25150/138‑1 (MQ=255)
 aTTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  5:121052/138‑1 (MQ=255)
 aTTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  4:198180/138‑1 (MQ=255)
 aTTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  3:322997/138‑1 (MQ=255)
 aTTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  8:126550/138‑1 (MQ=255)
     ttgtAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  7:191860/134‑1 (MQ=255)
     ttgtAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    >  8:191860/1‑134 (MQ=255)
     ttgtAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATg                                                                                                                                  >  4:194800/1‑136 (MQ=255)
     ttgtAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATg                                                                                                                                  <  3:194800/136‑1 (MQ=255)
       gtAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTa                                                                                                                             >  4:376493/1‑139 (MQ=255)
          atatCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCTCCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACa                                                                                                                           <  1:74463/138‑1 (MQ=255)
               aaGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTg                                                                                                                     >  2:147023/1‑139 (MQ=255)
               aaGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTg                                                                                                                     >  2:431554/1‑139 (MQ=255)
                    attgatCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    >  2:370376/1‑119 (MQ=255)
                    attgatCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  1:370376/119‑1 (MQ=255)
                    attgatCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGaa                                                                                                                                <  7:255077/123‑1 (MQ=255)
                    attgatCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGaa                                                                                                                                >  8:255077/1‑123 (MQ=255)
                      tgatCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGa                                                                                                              >  1:252948/1‑139 (MQ=255)
                                  tGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTtcatca                                                                                                   >  7:96265/1‑138 (MQ=255)
                                  tGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCaa                                                                                                  <  6:273397/139‑1 (MQ=255)
                                  tGAATTTGCGGCGATTGGAACGTCCGCACCCCTTCATGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCaa                                                                                                  <  1:121488/139‑1 (MQ=255)
                                   gATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCaa                                                                                                  <  1:431554/138‑1 (MQ=255)
                                       ttGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTc                                                                                             >  2:256837/1‑139 (MQ=255)
                                       ttGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTc                                                                                             >  5:178123/1‑139 (MQ=255)
                                             cgATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAg                                                                                       <  1:147023/139‑1 (MQ=255)
                                                        tCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGc                                                                            >  6:207/1‑139 (MQ=255)
                                                          cGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    <  7:384934/81‑1 (MQ=255)
                                                          cGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCa                                                                                                                                    >  8:384934/1‑81 (MQ=255)
                                                          cGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATAAAATGTCTTGAAGCCTAACGCAGcc                                                                           >  4:257450/1‑138 (MQ=255)
                                                            cACCCCTTCAGACTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATg                                                                        <  3:252613/139‑1 (MQ=255)
                                                                    cAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCa                                                                  <  7:326900/137‑1 (MQ=255)
                                                                    cAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCa                                                                  <  5:102914/137‑1 (MQ=255)
                                                                     aGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGa                                                               <  6:98075/139‑1 (MQ=255)
                                                                         tGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAActt                                                           >  2:257768/1‑139 (MQ=255)
                                                                         tGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTAACAGTGATCCTTAGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATGTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAAct                                                            >  8:318929/1‑138 (MQ=255)
                                                                           aTAAAGAAGGGTAGACAAATCAAGCTGGCTTTCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATAATTGAGGCCGATCATTTCATCAAATGTCTTGAATACTAACGCAGCAATGTACTCACGAActtct                                                         >  1:296431/1‑139 (MQ=255)
                                                                           aTAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCaa                                                                                                  <  6:408887/98‑1 (MQ=255)
                                                                           aTAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCaa                                                                                                  >  5:408887/1‑98 (MQ=255)
                                                                           aTAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCCGCCAGGGACTCCCGACcttct                                                         >  3:291941/1‑139 (MQ=255)
                                                                           aTAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCCCGAActtct                                                         >  1:215195/1‑139 (MQ=255)
                                                                           aTAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAActtct                                                         >  1:20105/1‑139 (MQ=255)
                                                                           aTAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAActtct                                                         >  4:345822/1‑139 (MQ=255)
                                                                            tAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAActtctt                                                        >  5:196300/1‑139 (MQ=255)
                                                                            tAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAActtct                                                         >  1:396666/1‑138 (MQ=255)
                                                                                 aagGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCa                                                   <  3:376493/139‑1 (MQ=255)
                                                                                     gTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGa                                               <  2:252948/139‑1 (MQ=255)
                                                                                      tAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTTCTTTGCCCGTTCACTTGCATGTAGTACATCAGTGCGGCCGATAATTTCATCAAATGTCTTGAAGCCTAAGGCAGCCATTTACTCACGAACTTCTTCGGCAATGaa                                              <  7:318929/139‑1 (MQ=255)
                                                                                        gACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCAt                                                                                                          <  8:422059/77‑1 (MQ=255)
                                                                                        gACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCAt                                                                                                          >  7:422059/1‑77 (MQ=255)
                                                                                         aCAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAg                                           >  2:266688/1‑139 (MQ=255)
                                                                                           aaaTCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCa                                         >  6:440107/1‑139 (MQ=255)
                                                                                             aTCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTAc                                                                                                                            >  3:407618/1‑54 (MQ=255)
                                                                                             aTCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTAc                                                                                                                            <  4:407618/54‑1 (MQ=255)
                                                                                             aTCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACg                                                                                <  5:440311/98‑1 (MQ=255)
                                                                                             aTCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACg                                                                                >  6:440311/1‑98 (MQ=255)
                                                                                             aTCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGACCTTCTTCGGCAATGCACAGCata                                       >  4:10170/1‑139 (MQ=255)
                                                                                             aTCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCata                                       <  6:178123/139‑1 (MQ=255)
                                                                                             aTCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCata                                       <  7:286384/139‑1 (MQ=255)
                                                                                                aaGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGCACAGCATATAg                                    >  6:231523/1‑139 (MQ=255)
                                                                                                aaGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCATATAg                                    >  2:296599/1‑139 (MQ=255)
                                                                                                       cttgcttTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAActtc                                                          >  4:341782/1‑110 (MQ=255)
                                                                                                       cttgcttTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAActtc                                                          <  3:341782/110‑1 (MQ=255)
                                                                                                       cttgcttTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCATATAGTTCACaa                             >  1:58824/1‑139 (MQ=255)
                                                                                                          gcttTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAAt                                                                                                >  8:406500/1‑69 (MQ=255)
                                                                                                          gcttTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAAt                                                                                                <  7:406500/69‑1 (MQ=255)
                                                                                                           cttTCCAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCATATAGTTCACAATATg                         >  4:445926/1‑139 (MQ=255)
                                                                                                              tCCAGTTCTCCTTTTCCCTTGCACGTGCATGAAGTACATAAGTTCGGACGATCATTTCATAAAATGTCTTGAAGCATACCTCAGCCATGTACTCAAGAAATTATTAGGACATGAACAGCATATAGTTCACAATATGGt                       <  2:296431/138‑1 (MQ=255)
                                                                                                                cAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACg                                                                                >  8:261812/1‑79 (MQ=255)
                                                                                                                cAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACg                                                                                <  7:261812/79‑1 (MQ=255)
                                                                                                                cAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCCGCCATGTACTAACGAACATCTTCGGCAAAGAACAGCAAATAGATCACAAAATGGTCAg                    >  3:231550/1‑139 (MQ=255)
                                                                                                                cAGTGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCATATAGTTCACAATATGGTCAg                    >  5:92489/1‑139 (MQ=255)
                                                                                                                   tGCTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCATATAGTTCACAATATGGTCAGGAt                 <  1:45050/139‑1 (MQ=255)
                                                                                                                   tGCTCCTTTGCCCGGTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCATATAGTTCACAATATGGTCAGGAt                 <  3:345822/139‑1 (MQ=255)
                                                                                                                     cTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCCGCCATGTACTCACGAACTACATCGGCAATGAACAGCATATAGTTCACAATATGGTCAGGAtct               >  7:349431/1‑139 (MQ=255)
                                                                                                                     cTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACa                                            >  7:402221/1‑110 (MQ=255)
                                                                                                                     cTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACa                                            <  8:402221/110‑1 (MQ=255)
                                                                                                                     cTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACCGCAGATAGGTCACAATATGGTCAGGAtct               >  8:107638/1‑139 (MQ=255)
                                                                                                                     cTCCTTTGCCCGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCATATAGTTCACAATATGGTCAGGAtct               >  3:59503/1‑139 (MQ=255)
                                                                                                                              ccGTTCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCATATAGTTCACAATATGGTCAGGATCTCCCATGAAc      <  6:92489/139‑1 (MQ=255)
                                                                                                                                  tCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGaa                                              >  8:135169/1‑95 (MQ=255)
                                                                                                                                  tCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGaa                                              >  2:192485/1‑95 (MQ=255)
                                                                                                                                  tCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGaa                                              <  7:135169/95‑1 (MQ=255)
                                                                                                                                  tCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGaa                                              <  1:192485/95‑1 (MQ=255)
                                                                                                                                  tCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGa                                               <  8:109549/94‑1 (MQ=255)
                                                                                                                                  tCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACa                                            >  2:235085/1‑97 (MQ=255)
                                                                                                                                  tCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACa                                            <  1:235085/97‑1 (MQ=255)
                                                                                                                                  tCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCATATAGTTCACAATATGGTCAGGATCTCCCATGAACtttt  >  3:375410/1‑139 (MQ=255)
                                                                                                                                  tCACTTGCATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGAAGCCATGTACTCACGAACTTCTTCGGCAATGa                                               >  7:109549/1‑94 (MQ=255)
                                                                                                                                        |                                                                                                                                    
AATTGTTGTAATATCAAGTGATTGATCAATTTTATGATTTTGCGGCGATTGGAACGTCCGCACCCCTTCAGGCTGATAAAGAAGGGTAGACAAATCAAGCTGGCTTGCTTTCCAGTGCTCCTTTGCCCGTTCACTTACATGAAGTACATCAGTGCGGCCGATCATTTCATCAAATGTCTTGAAGCCTAACGCAGCCATGTACTCACGAACTTCTTCGGCAATGAACAGCATATAGTTCACAATATGGTCAGGATCTCCCATGAACTTTT  >  CP006881/1963210‑1963478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑