| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,178,823 | T→C | A114A (GCT→GCC) | U712_10905 → | UPF0750 membrane protein ypjC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,178,823 | 0 | T | C | 99.0% | 327.8 / NA | 103 | A114A (GCT→GCC) | U712_10905 | UPF0750 membrane protein ypjC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (50/52); minor base A (1/0); total (51/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 103 total aligned reads displayed.
GGCAGAACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCCTGTCTTTGTTCCTCAGCATTTTTCAGCGATATGAAATACATATGCCTCTTCAGCACGACTTAGCGCTCGCTTCTTTATTTGCTGGCGTGTTTATCGGGGCCGGATTAGGAATTATTTTTAAGTTCGGCGGTACGACAGGTGGAGTTGATATCATCGCCCGTTTGGTCAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGC > CP006881/2178698‑2178957 | ggCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCAt < 8:201572/137‑1 (MQ=255)ggCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCAt < 3:301475/137‑1 (MQ=255)ggCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCAt < 6:21917/137‑1 (MQ=255)ggCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCAt < 4:263733/137‑1 (MQ=255)ggCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCACTCGCCGCTTTATTTGCCGGCGTATTCAt < 4:197525/137‑1 (MQ=255) gCAGGACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATctg > 2:416226/1‑137 (MQ=255) aggaCAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCggag < 2:62018/136‑3 (MQ=255) aaTGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGa < 1:356263/139‑1 (MQ=255) aaTGTTTGTTTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGa < 4:165710/139‑1 (MQ=255) tgtttgttTATACCCTTGTCGGCAGTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGact > 6:175838/1‑137 (MQ=255) tgtttgttTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATTAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATATGACGGCGTATTCATCGCAGCCgaact > 2:142291/1‑135 (MQ=255) tgtttgttTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGact > 4:351643/1‑137 (MQ=255) tgtttgttTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGact > 8:339882/1‑137 (MQ=255) tgtttgttTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGact < 3:137845/139‑3 (MQ=255) tgtatgttTATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCAGGCGTATTCATCGGAGCCGGact > 8:269934/1‑137 (MQ=255) tttgtttATACCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGactgg > 1:74838/1‑135 (MQ=255) taCCCTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTattatt > 3:282144/1‑139 (MQ=255) cccTTGTCGGCACTGTAGCCATGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTAtttt > 6:6520/1‑139 (MQ=255) tGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCCCGACTTAGCGCTCGCCGCTTTATTTTCCGGCGTATTCATCGGCGCCGGACTGGGTATTATTTTTAAg > 6:147347/1‑139 (MQ=255) tGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGTCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAg > 7:252816/1‑139 (MQ=255) tGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCg < 4:376118/113‑1 (MQ=255) tGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCg > 3:376118/1‑113 (MQ=255) tGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAg > 1:134448/1‑139 (MQ=255) tGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAg > 7:22751/1‑139 (MQ=255) tGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGGATTATTTTTAAg > 3:33495/1‑139 (MQ=255) cGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTc < 1:60543/139‑1 (MQ=255) gCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTcgg < 6:360432/139‑1 (MQ=255) aCTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTcggct > 8:427034/1‑138 (MQ=255) tGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTcggcgg > 7:15426/1‑138 (MQ=255) taggcttGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTAc > 8:343358/7‑139 (MQ=255) tAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTTTTATTTTTAAGTTCGGCGGTAc > 1:307273/1‑139 (MQ=255) tAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGt < 5:220165/137‑1 (MQ=255) tAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCGTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTGGGCGGTAc > 5:443145/1‑139 (MQ=255) tAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACATAGCGCTCGCCGCTTTATTTGCCGGCGTATTCCTCGGAGCCGGACTGGGTATTTTTTTTTAGTTCGGCGGTAc > 1:323083/1‑139 (MQ=255) cttGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGt > 3:211681/3‑133 (MQ=255) cttGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGt < 4:211681/131‑1 (MQ=255) gTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCGCCTTCAGCACGACTTAGCTCTCGCCGCTTTATTTGCCGGCGTATTCATCGGATCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAgg < 2:157441/138‑1 (MQ=255) gTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAgg < 4:144179/138‑1 (MQ=255) gTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAgg < 5:286272/138‑1 (MQ=255) gTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAgg < 6:81030/138‑1 (MQ=255) gTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAgg < 6:212977/138‑1 (MQ=255) gTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAgg < 8:15426/138‑1 (MQ=255) gTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAgg < 1:191260/138‑1 (MQ=255) gTCGTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCACTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGTGTATTATTTTTAAGTTCGGCGGTACGACAgg < 8:428715/138‑1 (MQ=255) tCTTTGTTCCTCAGCATCTTTCCGCGATATGAAATCCATATGCCCCTTCAGCACGCCTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACGGGGTAGTATTTTTAAGTTCGGCGGTACGCCAggcg > 2:58344/1‑137 (MQ=255) tCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGCCAggcg > 8:162429/1‑137 (MQ=255) tCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAggcg > 6:361583/1‑137 (MQ=255) tCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAggcg < 2:134448/139‑3 (MQ=255) tCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAggcg < 8:252816/139‑3 (MQ=255) gCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATatcat < 2:74838/139‑1 (MQ=255) cATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAgg < 7:120328/123‑1 (MQ=255) cATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAgg > 8:120328/1‑123 (MQ=255) atctttCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCg < 5:361583/136‑1 (MQ=255) atctttCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCg < 7:343358/136‑1 (MQ=255) atctttCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCg < 3:218492/136‑1 (MQ=255) ttCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACg > 2:298600/1‑139 (MQ=255) ttCAGCGATATGAAATCCATATGCCCATTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTcggcgg < 2:35825/109‑1 (MQ=255) ttCAGCGATATGAAATCCATATGCCCATTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTcggcgg > 1:35825/1‑109 (MQ=255) aGCGATATGATATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGAGAGGCGGTGTTGATATCATCGCACGtt < 8:418448/138‑1 (MQ=255) cGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAgg < 8:400578/113‑1 (MQ=255) cGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAgg > 7:400578/1‑113 (MQ=255) cGATATGAAATCCATAAGCCCCATAAGAACGACTTAGCGCTCGCCGCTTTATTTTCCGGCTTATTCATAGGAGCCTGACTGTGTATTATATTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGtttag > 8:211189/1‑137 (MQ=255) tatGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTatt > 8:125081/1‑84 (MQ=255) aaaTCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa < 7:287760/138‑1 (MQ=255) aaaTCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa < 2:270824/138‑1 (MQ=255) aaaTCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa < 7:339882/138‑1 (MQ=255) aaaTCCATATGCCCCTTCAGCACGACTTAGCGCTCGCAGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa < 4:407925/138‑1 (MQ=255) tccATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGa < 7:231302/66‑1 (MQ=255) tccATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGa > 8:231302/3‑68 (MQ=255) tccATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTcggcgg > 1:356221/3‑94 (MQ=255) tccATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTcggcgg < 2:356221/92‑1 (MQ=255) atatGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTAttt < 7:162429/139‑1 (MQ=255) cccctTCAGCACGACTTAGCGCTCTGCGCTTTATTTGCCGGCGTATTCAGCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGa < 1:142291/136‑1 (MQ=255) cccctTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGa < 3:351643/136‑1 (MQ=255) cccctTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGa > 8:249809/4‑139 (MQ=255) cccctTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGGATTCATCGGATCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGa > 6:116420/4‑139 (MQ=255) cctTCAGCACGACTTAGCGCTCGCCGCTTTATTTGACGGCGTATTCATCGGAGACGGAATGGGTATTATTTTTAAGTTCTGCTGTACGAAACGCGGTGTTGATATAAACGCACGTTAAGTGAATAAGTATTTTGGGAtt > 6:363697/2‑139 (MQ=255) ctTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTc > 3:116783/1‑139 (MQ=255) ttCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa > 7:253503/1‑123 (MQ=255) ttCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa < 8:253503/123‑1 (MQ=255) cAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg < 1:416226/138‑1 (MQ=255) cAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg < 8:22751/138‑1 (MQ=255) cAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg < 5:301424/138‑1 (MQ=255) aGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGa < 3:319196/138‑1 (MQ=255) aGCACGACTTAGCGCGCGCAGCTTTATTTGCCGGAGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTTGGATTCCGAt < 5:338780/139‑1 (MQ=255) cACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAg < 4:9704/85‑1 (MQ=255) cACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAg > 3:9704/1‑85 (MQ=255) aCTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATggg > 6:363052/1‑136 (MQ=255) cTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAg > 8:148893/1‑138 (MQ=255) aGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg < 8:117266/127‑1 (MQ=255) aGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg > 7:117266/1‑127 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTTAGTTCGGCGGTACGACAGGCGGTGTTGATATACTCGCCCGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 1:353287/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 7:67739/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 2:188169/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 7:97596/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 4:187079/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 5:148151/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 6:178153/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGAGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg < 5:6520/135‑1 (MQ=255) ttGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGc > 8:116031/1‑139 (MQ=255) | GGCAGAACAATGTTTGTTTATACCCTTGTCGGCACTGTAGCCCTGTCTTTGTTCCTCAGCATTTTTCAGCGATATGAAATACATATGCCTCTTCAGCACGACTTAGCGCTCGCTTCTTTATTTGCTGGCGTGTTTATCGGGGCCGGATTAGGAATTATTTTTAAGTTCGGCGGTACGACAGGTGGAGTTGATATCATCGCCCGTTTGGTCAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGC > CP006881/2178698‑2178957 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |