| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,178,898 | C→A | A139A (GCC→GCA) | U712_10905 → | UPF0750 membrane protein ypjC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,178,898 | 0 | C | A | 99.1% | 338.8 / NA | 112 | A139A (GCC→GCA) | U712_10905 | UPF0750 membrane protein ypjC |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (49/61); total (50/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 112 total aligned reads displayed.
TTCAGCGATATGAAATACATATGCCTCTTCAGCACGACTTAGCGCTCGCTTCTTTATTTGCTGGCGTGTTTATCGGGGCCGGATTAGGAATTATTTTTAAGTTCGGCGGTACGACAGGTGGAGTTGATATCATCGCCCGTTTGGTCAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTATCTTTGCTTACTTATCTCTCCTACAAAGAAGCGATGTATACCCTGGTGGCTGTATTTG > CP006881/2178762‑2179031 | ttCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACg > 2:298600/1‑139 (MQ=255) aGCGATATGATATCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGAGAGGCGGTGTTGATATCATCGCACGtt < 8:418448/138‑1 (MQ=255) cGATATGAAATCCATAAGCCCCATAAGAACGACTTAGCGCTCGCCGCTTTATTTTCCGGCTTATTCATAGGAGCCTGACTGTGTATTATATTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGtttag > 8:211189/1‑137 (MQ=255) aaaTCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa < 7:339882/138‑1 (MQ=255) aaaTCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa < 7:287760/138‑1 (MQ=255) aaaTCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa < 2:270824/138‑1 (MQ=255) aaaTCCATATGCCCCTTCAGCACGACTTAGCGCTCGCAGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa < 4:407925/138‑1 (MQ=255) atatGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTAttt < 7:162429/139‑1 (MQ=255) cccctTCAGCACGACTTAGCGCTCTGCGCTTTATTTGCCGGCGTATTCAGCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGa < 1:142291/136‑1 (MQ=255) cccctTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGa < 3:351643/136‑1 (MQ=255) cccctTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGGATTCATCGGATCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGa > 6:116420/4‑139 (MQ=255) ctTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTc > 3:116783/1‑139 (MQ=255) ttCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa < 8:253503/123‑1 (MQ=255) cAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg < 1:416226/138‑1 (MQ=255) cAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg < 8:22751/138‑1 (MQ=255) cAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg < 5:301424/138‑1 (MQ=255) aGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGa < 3:319196/138‑1 (MQ=255) aGCACGACTTAGCGCGCGCAGCTTTATTTGCCGGAGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTTGGATTCCGAt < 5:338780/139‑1 (MQ=255) aCTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATggg > 6:363052/1‑136 (MQ=255) cTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAg > 8:148893/1‑138 (MQ=255) aGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg > 7:117266/1‑127 (MQ=255) aGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg < 8:117266/127‑1 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTTAGTTCGGCGGTACGACAGGCGGTGTTGATATACTCGCCCGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 1:353287/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 7:97596/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 6:178153/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 7:67739/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 2:188169/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg > 4:187079/5‑139 (MQ=255) gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGAGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg < 5:6520/135‑1 (MQ=255) ttGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGc > 8:116031/1‑139 (MQ=255) gccggCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCt > 5:380317/4‑139 (MQ=255) gccggCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCt > 2:50347/4‑139 (MQ=255) ggCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCg > 6:7584/1‑139 (MQ=255) cGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGtc < 7:269934/139‑1 (MQ=255) cGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGtc < 5:175838/139‑1 (MQ=255) cGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCAttttg > 8:147532/1‑138 (MQ=255) agCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCt > 4:178591/2‑139 (MQ=255) gCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCAAGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCtt > 6:400620/1‑139 (MQ=255) ccGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCttt > 7:47679/1‑139 (MQ=255) ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGtc < 8:400136/114‑1 (MQ=255) ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGtc > 7:400136/4‑117 (MQ=255) ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCTGCATTTTGTCTTTGcttact > 6:190264/4‑138 (MQ=255) ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGcttactt < 6:380317/136‑1 (MQ=255) ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGcttact > 6:427545/4‑138 (MQ=255) tattattTTTAAGTTCGGCGGTACGAGAGGCGGGGTTGATATCATCGCTCGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAt < 2:353287/138‑1 (MQ=255) tattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAt < 1:298600/138‑1 (MQ=255) ttattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtct < 7:148893/139‑1 (MQ=255) ttattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtct < 7:116031/139‑1 (MQ=255) ttattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtct < 4:282144/139‑1 (MQ=255) tattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctc > 2:176728/1‑139 (MQ=255) tattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtct < 6:265426/138‑1 (MQ=255) attTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctc < 1:50347/138‑1 (MQ=255) tttttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctctc < 7:249809/139‑1 (MQ=255) ttttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctctc < 4:33495/138‑1 (MQ=255) ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa > 6:207328/1‑139 (MQ=255) ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa > 5:207431/1‑139 (MQ=255) ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa > 7:83617/1‑139 (MQ=255) ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa > 4:217002/1‑139 (MQ=255) ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa > 3:390694/1‑139 (MQ=255) aaGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTat > 5:337793/1‑137 (MQ=255) aGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTata < 5:7584/138‑3 (MQ=255) aGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTata < 8:67739/138‑3 (MQ=255) ttCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAaag < 5:207328/139‑1 (MQ=255) cggcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAaag > 7:409073/1‑137 (MQ=255) cggcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAaag > 6:124409/1‑137 (MQ=255) gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTTTTTTGGGATTCCGATGGGCAGAACTATGTTTGGTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc < 7:211189/139‑1 (MQ=255) gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc < 1:188169/139‑1 (MQ=255) gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc < 5:427545/139‑1 (MQ=255) gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc < 3:62438/139‑1 (MQ=255) gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGAAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc < 4:65716/139‑1 (MQ=255) gcggGACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTGTGGGATTCCGATGGGCAGAACGATGTTTGCTTGCGATGCCTGCGGCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc < 2:331224/139‑1 (MQ=255) cggTACGTCATGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg < 5:363697/139‑1 (MQ=255) cggTACGACAGGCTGGGTTGATATCATCGCACGTTTAGTGAATAAGTATATTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGCTGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg < 6:37690/139‑1 (MQ=255) cggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg < 5:116420/139‑1 (MQ=255) cggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg < 6:337793/139‑1 (MQ=255) cggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATGCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg < 4:422461/139‑1 (MQ=255) tACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATg < 3:187079/139‑1 (MQ=255) cGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGta < 1:176728/139‑1 (MQ=255) cGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGta < 6:207431/139‑1 (MQ=255) gACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGtat < 4:116783/139‑1 (MQ=255) gACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTGGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGtat < 6:148151/139‑1 (MQ=255) gcggtgTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCt < 8:409073/134‑1 (MQ=255) gcggtgTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCt < 5:363052/134‑1 (MQ=255) gggTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCtggt < 6:443145/137‑1 (MQ=255) tgTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCtggta < 5:44493/138‑2 (MQ=255) gTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCtggtag > 6:271349/1‑137 (MQ=255) ttGATATCATCGGACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGc < 5:147347/139‑1 (MQ=255) ttGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGc < 8:47679/139‑1 (MQ=255) ttGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGc < 4:390694/139‑1 (MQ=255) tatCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTa > 2:336919/1‑139 (MQ=255) catcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTAttt > 7:124453/1‑139 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAt > 8:246020/1‑96 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAt < 7:246020/96‑1 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGta > 5:419789/1‑119 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGta < 6:419789/119‑1 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTg > 5:130290/1‑139 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTg > 8:287636/1‑139 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTg > 8:389594/1‑139 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAACTCTCCTATTAAGAAGCGATGTATACGATGGTAGCTGTATTTg > 8:158176/1‑139 (MQ=255) cGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGtata > 6:36407/1‑119 (MQ=255) | TTCAGCGATATGAAATACATATGCCTCTTCAGCACGACTTAGCGCTCGCTTCTTTATTTGCTGGCGTGTTTATCGGGGCCGGATTAGGAATTATTTTTAAGTTCGGCGGTACGACAGGTGGAGTTGATATCATCGCCCGTTTGGTCAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTATCTTTGCTTACTTATCTCTCCTACAAAGAAGCGATGTATACCCTGGTGGCTGTATTTG > CP006881/2178762‑2179031 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |