Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,178,907 C→G V142V (GTC→GTG)  U712_10905 → UPF0750 membrane protein ypjC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,178,9070CG100.0% 367.8 / NA 111V142V (GTC→GTG) U712_10905UPF0750 membrane protein ypjC
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (49/62);  total (49/62)

Only 100 of 111 total aligned reads displayed.

AAATACATATGCCTCTTCAGCACGACTTAGCGCTCGCTTCTTTATTTGCTGGCGTGTTTATCGGGGCCGGATTAGGAATTATTTTTAAGTTCGGCGGTACGACAGGTGGAGTTGATATCATCGCCCGTTTGGTCAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTATCTTTGCTTACTTATCTCTCCTACAAAGAAGCGATGTATACCCTGGTGGCTGTATTTGTAGCTGC  >  CP006881/2178774‑2179038
                                                                                                                                     |                                                                                                                                   
aaaTCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa                                                                                                                                 <  7:287760/138‑1 (MQ=255)
aaaTCCATATGCCCCTTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa                                                                                                                                 <  7:339882/138‑1 (MQ=255)
aaaTCCATATGCCCCTTCAGCACGACTTAGCGCTCGCAGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa                                                                                                                                 <  4:407925/138‑1 (MQ=255)
           cccctTCAGCACGACTTAGCGCTCTGCGCTTTATTTGCCGGCGTATTCAGCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGa                                                                                                                     <  1:142291/136‑1 (MQ=255)
           cccctTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGa                                                                                                                     >  8:249809/4‑139 (MQ=255)
           cccctTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGGATTCATCGGATCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGa                                                                                                                     >  6:116420/4‑139 (MQ=255)
             cctTCAGCACGACTTAGCGCTCGCCGCTTTATTTGACGGCGTATTCATCGGAGACGGAATGGGTATTATTTTTAAGTTCTGCTGTACGAAACGCGGTGTTGATATAAACGCACGTTAAGTGAATAAGTATTTTGGGAtt                                                                                                                   >  6:363697/2‑139 (MQ=255)
              ctTCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTc                                                                                                                  >  3:116783/1‑139 (MQ=255)
               ttCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa                                                                                                                                 >  7:253503/1‑123 (MQ=255)
               ttCAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATa                                                                                                                                 <  8:253503/123‑1 (MQ=255)
                 cAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg                                                                                                                <  1:416226/138‑1 (MQ=255)
                 cAGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg                                                                                                                <  5:301424/138‑1 (MQ=255)
                  aGCACGACTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGa                                                                                                               <  3:319196/138‑1 (MQ=255)
                  aGCACGACTTAGCGCGCGCAGCTTTATTTGCCGGAGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTTGGATTCCGAt                                                                                                              <  5:338780/139‑1 (MQ=255)
                        aCTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATggg                                                                                                           >  6:363052/1‑136 (MQ=255)
                         cTTAGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAg                                                                                                        >  8:148893/1‑138 (MQ=255)
                            aGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg                                                                                                                >  7:117266/1‑127 (MQ=255)
                            aGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCg                                                                                                                <  8:117266/127‑1 (MQ=255)
                                   gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTTAGTTCGGCGGTACGACAGGCGGTGTTGATATACTCGCCCGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg                                                                                             >  1:353287/5‑139 (MQ=255)
                                   gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg                                                                                             >  5:148151/5‑139 (MQ=255)
                                   gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg                                                                                             >  7:67739/5‑139 (MQ=255)
                                   gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg                                                                                             >  6:178153/5‑139 (MQ=255)
                                   gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg                                                                                             >  7:97596/5‑139 (MQ=255)
                                   gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg                                                                                             >  4:187079/5‑139 (MQ=255)
                                   gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg                                                                                             >  2:188169/5‑139 (MQ=255)
                                   gccgcttTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGAGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTg                                                                                             <  5:6520/135‑1 (MQ=255)
                                             ttGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGc                                                                                   >  8:116031/1‑139 (MQ=255)
                                               gccggCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCt                                                                                 >  2:50347/4‑139 (MQ=255)
                                               gccggCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCt                                                                                 >  5:380317/4‑139 (MQ=255)
                                                 cggCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGc                                                                               >  2:229305/2‑139 (MQ=255)
                                                  ggCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCg                                                                              >  6:7584/1‑139 (MQ=255)
                                                    cGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGtc                                                                            <  5:175838/139‑1 (MQ=255)
                                                    cGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGtc                                                                            <  7:269934/139‑1 (MQ=255)
                                                             cGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCAttttg                                                                   >  8:147532/1‑138 (MQ=255)
                                                                agCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCt                                                                >  4:178591/2‑139 (MQ=255)
                                                                 gCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCAAGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCtt                                                               >  6:400620/1‑139 (MQ=255)
                                                                       ctgggtattattTTTAAGTTCGGCGGGACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGctta                                                         <  4:220557/133‑1 (MQ=255)
                                                                          ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGtc                                                                            >  7:400136/4‑117 (MQ=255)
                                                                          ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGtc                                                                            <  8:400136/114‑1 (MQ=255)
                                                                          ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCTGCATTTTGTCTTTGcttact                                                       >  6:190264/4‑138 (MQ=255)
                                                                          ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGcttactt                                                      <  6:380317/136‑1 (MQ=255)
                                                                          ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGcttact                                                       >  6:427545/4‑138 (MQ=255)
                                                                          ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGcttact                                                       >  8:104304/4‑138 (MQ=255)
                                                                            tattattTTTAAGTTCGGCGGTACGAGAGGCGGGGTTGATATCATCGCTCGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAt                                                    <  2:353287/138‑1 (MQ=255)
                                                                            tattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAt                                                    <  1:298600/138‑1 (MQ=255)
                                                                              ttattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtct                                                  <  4:282144/139‑1 (MQ=255)
                                                                              ttattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtct                                                  <  7:116031/139‑1 (MQ=255)
                                                                              ttattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtct                                                  <  7:148893/139‑1 (MQ=255)
                                                                               tattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctc                                                 >  2:176728/1‑139 (MQ=255)
                                                                               tattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtct                                                  <  6:265426/138‑1 (MQ=255)
                                                                                attTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctc                                                 <  1:50347/138‑1 (MQ=255)
                                                                                 tttttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctctc                                               <  7:249809/139‑1 (MQ=255)
                                                                                  ttttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctctc                                               <  7:104304/138‑1 (MQ=255)
                                                                                  ttttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctctc                                               <  4:33495/138‑1 (MQ=255)
                                                                                    ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa                                            >  4:217002/1‑139 (MQ=255)
                                                                                    ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa                                            >  6:207328/1‑139 (MQ=255)
                                                                                    ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa                                            >  7:83617/1‑139 (MQ=255)
                                                                                    ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa                                            >  3:390694/1‑139 (MQ=255)
                                                                                      aaGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTat                                           >  5:337793/1‑137 (MQ=255)
                                                                                       aGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTata                                          <  8:67739/138‑3 (MQ=255)
                                                                                       aGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTata                                          <  5:7584/138‑3 (MQ=255)
                                                                                         ttCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAaag                                       <  5:207328/139‑1 (MQ=255)
                                                                                           cggcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAaag                                       >  7:409073/1‑137 (MQ=255)
                                                                                           cggcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAaag                                       >  6:124409/1‑137 (MQ=255)
                                                                                            ggcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAaagaag                                    <  3:217002/139‑1 (MQ=255)
                                                                                             gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTTTTTTGGGATTCCGATGGGCAGAACTATGTTTGGTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc                                   <  7:211189/139‑1 (MQ=255)
                                                                                             gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc                                   <  3:62438/139‑1 (MQ=255)
                                                                                             gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc                                   <  5:427545/139‑1 (MQ=255)
                                                                                             gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc                                   <  1:188169/139‑1 (MQ=255)
                                                                                             gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGAAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc                                   <  4:65716/139‑1 (MQ=255)
                                                                                             gcggGACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTGTGGGATTCCGATGGGCAGAACGATGTTTGCTTGCGATGCCTGCGGCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc                                   <  2:331224/139‑1 (MQ=255)
                                                                                              cggTACGTCATGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg                                  <  5:363697/139‑1 (MQ=255)
                                                                                              cggTACGACAGGCTGGGTTGATATCATCGCACGTTTAGTGAATAAGTATATTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGCTGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg                                  <  6:37690/139‑1 (MQ=255)
                                                                                              cggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg                                  <  6:337793/139‑1 (MQ=255)
                                                                                              cggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg                                  <  5:116420/139‑1 (MQ=255)
                                                                                              cggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATGCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg                                  <  4:422461/139‑1 (MQ=255)
                                                                                                 tACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATg                               <  3:187079/139‑1 (MQ=255)
                                                                                                   cGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGta                             <  1:176728/139‑1 (MQ=255)
                                                                                                    gACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGtat                            <  4:116783/139‑1 (MQ=255)
                                                                                                    gACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTGGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGtat                            <  6:148151/139‑1 (MQ=255)
                                                                                                         gcggtgTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCt                       <  8:409073/134‑1 (MQ=255)
                                                                                                         gcggtgTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCt                       <  5:363052/134‑1 (MQ=255)
                                                                                                            gggTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCtggt                    <  6:443145/137‑1 (MQ=255)
                                                                                                              gTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCtggtag                  >  6:271349/1‑137 (MQ=255)
                                                                                                               ttGATATCATCGGACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGc                 <  5:147347/139‑1 (MQ=255)
                                                                                                               ttGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGc                 <  8:47679/139‑1 (MQ=255)
                                                                                                                   tatCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTa             >  2:336919/1‑139 (MQ=255)
                                                                                                                      catcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTAttt          >  7:124453/1‑139 (MQ=255)
                                                                                                                       atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAt                                                    >  8:246020/1‑96 (MQ=255)
                                                                                                                       atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAt                                                    <  7:246020/96‑1 (MQ=255)
                                                                                                                       atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGta                             >  5:419789/1‑119 (MQ=255)
                                                                                                                       atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTg         >  5:130290/1‑139 (MQ=255)
                                                                                                                       atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTg         >  6:13557/1‑139 (MQ=255)
                                                                                                                       atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTg         >  8:287636/1‑139 (MQ=255)
                                                                                                                       atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTg         >  8:389594/1‑139 (MQ=255)
                                                                                                                       atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAACTCTCCTATTAAGAAGCGATGTATACGATGGTAGCTGTATTTg         >  8:158176/1‑139 (MQ=255)
                                                                                                                         cGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGtata                           <  5:36407/119‑1 (MQ=255)
                                                                                                                         cGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGtata                           >  6:36407/1‑119 (MQ=255)
                                                                                                                           cacGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGc     >  6:95964/3‑139 (MQ=255)
                                                                                                                              gTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGc  <  2:307273/139‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                   
AAATACATATGCCTCTTCAGCACGACTTAGCGCTCGCTTCTTTATTTGCTGGCGTGTTTATCGGGGCCGGATTAGGAATTATTTTTAAGTTCGGCGGTACGACAGGTGGAGTTGATATCATCGCCCGTTTGGTCAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTATCTTTGCTTACTTATCTCTCCTACAAAGAAGCGATGTATACCCTGGTGGCTGTATTTGTAGCTGC  >  CP006881/2178774‑2179038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑