| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,178,973 | A→G | L164L (TTA→TTG) | U712_10905 → | UPF0750 membrane protein ypjC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,178,973 | 0 | A | G | 99.1% | 343.1 / ‑5.0 | 106 | L164L (TTA→TTG) | U712_10905 | UPF0750 membrane protein ypjC |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (45/60); total (46/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.34e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
GGCCGGATTAGGAATTATTTTTAAGTTCGGCGGTACGACAGGTGGAGTTGATATCATCGCCCGTTTGGTCAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTATCTTTGCTTACTTATCTCTCCTACAAAGAAGCGATGTATACCCTGGTGGCTGTATTTGTAGCTGCAAGATTAATTGATTTTATTCAGGAAGGCGGATACGCTGCTAAAGGCGCTACGATTATCTCTTCGAAAAACG > CP006881/2178838‑2179109 | agCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCt > 4:178591/2‑139 (MQ=255) gCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCAAGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCtt > 6:400620/1‑139 (MQ=255) ccGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCttt > 7:47679/1‑139 (MQ=255) ctgggtattattTTTAAGTTCGGCGGGACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGctta < 4:220557/133‑1 (MQ=255) ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCTGCATTTTGTCTTTGcttact > 6:190264/4‑138 (MQ=255) ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGcttactt < 6:380317/136‑1 (MQ=255) ggtattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGcttact > 8:104304/4‑138 (MQ=255) tattattTTTAAGTTCGGCGGTACGAGAGGCGGGGTTGATATCATCGCTCGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAt < 2:353287/138‑1 (MQ=255) tattattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAt < 1:298600/138‑1 (MQ=255) ttattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtct < 7:148893/139‑1 (MQ=255) ttattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtct < 7:116031/139‑1 (MQ=255) ttattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtct < 4:282144/139‑1 (MQ=255) tattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctc > 2:176728/1‑139 (MQ=255) tattTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtct < 6:265426/138‑1 (MQ=255) attTTTAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctc < 1:50347/138‑1 (MQ=255) tttttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctctc < 7:249809/139‑1 (MQ=255) ttttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctctc < 7:104304/138‑1 (MQ=255) ttttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAtctctc < 4:33495/138‑1 (MQ=255) ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa > 5:207431/1‑139 (MQ=255) ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa > 4:217002/1‑139 (MQ=255) ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa > 6:207328/1‑139 (MQ=255) ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa > 3:390694/1‑139 (MQ=255) ttAAGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTa > 7:83617/1‑139 (MQ=255) aaGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTat > 5:337793/1‑137 (MQ=255) aGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTata < 8:67739/138‑3 (MQ=255) aGTTCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTata < 5:7584/138‑3 (MQ=255) ttCGGCGGTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAaag < 5:207328/139‑1 (MQ=255) cggcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAaag > 7:409073/1‑137 (MQ=255) cggcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAaag > 6:124409/1‑137 (MQ=255) ggcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAaagaag < 3:217002/139‑1 (MQ=255) gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTTTTTTGGGATTCCGATGGGCAGAACTATGTTTGGTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc < 7:211189/139‑1 (MQ=255) gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc < 1:188169/139‑1 (MQ=255) gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc < 5:427545/139‑1 (MQ=255) gcggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGAAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc < 4:65716/139‑1 (MQ=255) gcggGACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTGTGGGATTCCGATGGGCAGAACGATGTTTGCTTGCGATGCCTGCGGCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc < 2:331224/139‑1 (MQ=255) cggTACGTCATGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg < 5:363697/139‑1 (MQ=255) cggTACGACAGGCTGGGTTGATATCATCGCACGTTTAGTGAATAAGTATATTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGCTGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg < 6:37690/139‑1 (MQ=255) cggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg < 5:116420/139‑1 (MQ=255) cggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg < 6:337793/139‑1 (MQ=255) cggTACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATGCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg < 4:422461/139‑1 (MQ=255) tACGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATg < 3:187079/139‑1 (MQ=255) cGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGta < 6:207431/139‑1 (MQ=255) cGACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGta < 1:176728/139‑1 (MQ=255) gACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGtat < 4:116783/139‑1 (MQ=255) gACAGGCGGTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTGGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGtat < 6:148151/139‑1 (MQ=255) gcggtgTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCt < 5:363052/134‑1 (MQ=255) gcggtgTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCt < 8:409073/134‑1 (MQ=255) gggTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCtggt < 6:443145/137‑1 (MQ=255) tgTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCtggta < 5:44493/138‑2 (MQ=255) gTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCtggtag > 6:271349/1‑137 (MQ=255) ttGATATCATCGGACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGc < 5:147347/139‑1 (MQ=255) ttGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGc < 4:390694/139‑1 (MQ=255) ttGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGc < 8:47679/139‑1 (MQ=255) tatCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTa > 2:336919/1‑139 (MQ=255) catcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTAttt > 7:124453/1‑139 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAt > 8:246020/1‑96 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAt < 7:246020/96‑1 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGta > 5:419789/1‑119 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGta < 6:419789/119‑1 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTg > 6:13557/1‑139 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTg > 8:287636/1‑139 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTg > 8:389594/1‑139 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTg > 5:130290/1‑139 (MQ=255) atcGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTAACTCTCCTATTAAGAAGCGATGTATACGATGGTAGCTGTATTTg > 8:158176/1‑139 (MQ=255) cGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGtata > 6:36407/1‑119 (MQ=255) cGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGtata < 5:36407/119‑1 (MQ=255) cacGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGc > 6:95964/3‑139 (MQ=255) gTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGc < 2:307273/139‑1 (MQ=255) ttagtgaaTAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGc > 7:444573/7‑137 (MQ=255) aaTAAGTATTTTGGGATTCCGATGGTCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTaa > 8:345150/1‑139 (MQ=255) aTAAGTATTTTGGTATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAAt < 7:389594/139‑1 (MQ=255) tAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg < 4:185746/97‑1 (MQ=255) tAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCg > 3:185746/1‑97 (MQ=255) tAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAAtc > 8:435570/1‑138 (MQ=255) aGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGa < 6:130290/139‑1 (MQ=255) tATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGAtt < 1:336919/139‑1 (MQ=255) ttttGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTAt > 8:363604/1‑113 (MQ=255) ttttGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTAt < 7:363604/113‑1 (MQ=255) ttGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTAt > 4:346229/1‑139 (MQ=255) ttCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGta < 2:325715/88‑1 (MQ=255) ttCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGta > 1:325715/1‑88 (MQ=255) ttCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTATTCAgg > 6:48058/1‑138 (MQ=255) ccGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTATTCAGGaa < 5:271349/138‑1 (MQ=255) aTGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATAcgc > 6:318681/1‑86 (MQ=255) aTGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATAcgc < 5:318681/88‑3 (MQ=255) gggCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTATTCAGGAAGGCgg < 7:158176/138‑1 (MQ=255) cAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTATTCAGGAAGGCGGATAc < 8:124453/139‑1 (MQ=255) aGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTATTCAGGAAGGCGGATACg < 7:427034/139‑1 (MQ=255) aaCGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTATTCAGGAAGGCGGATACgct > 4:268130/1‑139 (MQ=255) aaCGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTATTCAGGAAGGCGGATACgct > 4:15381/1‑139 (MQ=255) cGATGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTTTTCAGGAAGGCGGATACgctgc > 6:45162/1‑139 (MQ=255) tGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc > 5:400517/1‑64 (MQ=255) tGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGc < 6:400517/64‑1 (MQ=255) tGTTTGCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTATTAAGGAATGCGGATACGCTGCTa > 2:27091/1‑138 (MQ=255) gCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTAtt > 5:109424/1‑111 (MQ=255) gCTTTCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTATTCAGGAAGGCGGATACGCTGCTAACGgcg > 8:381734/1‑139 (MQ=255) tCGATGCCTGCGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTATTCAGGAAGGCGGATACGCTGCTAAAGGCGCt < 7:147532/137‑1 (MQ=255) cGTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTATTCAGGAAGGCGGATACGCTGCTAAAGGCGCTACGATCATctct > 5:275531/1‑139 (MQ=255) catTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAGATTAATCGATTTTATTCAGGAAGGCGGATACGCTGCTAAAGGCGCTACGATCATCTCTTCGaa > 4:262794/1‑138 (MQ=255) ttATCTTTGCTTACTTATCTCTCCTACAAAGCAGCGCTGTATACCCTGGTGGCTGTATTTGTTGCTGCAAGATTAATTGATTTTATTCAGGTAGGCGGATACGCTGCTAAAGGCGCTACGATTATCTCTTCGAAAAACg > 4:338585/1‑139 (MQ=255) | GGCCGGATTAGGAATTATTTTTAAGTTCGGCGGTACGACAGGTGGAGTTGATATCATCGCCCGTTTGGTCAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGCGTCATCATTTTATCTTTGCTTACTTATCTCTCCTACAAAGAAGCGATGTATACCCTGGTGGCTGTATTTGTAGCTGCAAGATTAATTGATTTTATTCAGGAAGGCGGATACGCTGCTAAAGGCGCTACGATTATCTCTTCGAAAAACG > CP006881/2178838‑2179109 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |