| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,179,556 | A→G | D210D (GAT→GAC) | U712_10910 ← | Uncharacterized protein ypjB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,179,556 | 0 | A | G | 98.2% | 344.0 / ‑4.1 | 109 | D210D (GAT→GAC) | U712_10910 | Uncharacterized protein ypjB |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (55/52); total (56/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 109 total aligned reads displayed.
TTTTTCTCCGCTTTGTACTTTCTGTAGCCGACATAGGTCAGAGCTGTAATGATGATACTGCCGGTTGTGATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAAAACATTTTTCAGATCATGCTGAAGAAGAGAAAGCCGTTCAAGCTTTGTGCTCTCAGTCATTTGCTGAAATTCCTCTTGCTCAATGACGTCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGAC > CP006881/2179422‑2179686 | ttttttTCCGCCTTGTACTTTCTGTAACCGACATAGGTAAGAGCAGTAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCAt > 3:381844/1‑139 (MQ=255)ttttttTCCGCCTTGTACTTTCTGTAACCGACATAGGTAAGAGCAGTAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAAAACATTTTTCAGGTCAt > 5:251189/1‑139 (MQ=255) ttttTCCGCCTTGTACTTTCTGTAACCGACATAGGTAAGAGCATTAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATg < 8:34112/138‑1 (MQ=255) cttttcCGCCTTGTCCTTTCTCTAACCCACATACGCACGAGCAGTAATGATGATACTGCCGGTGGTAATGAACACCCAGACAAACCACGGATCGGCATCATCCTCCTCCACCCTGCCAAACACATTTTTCAGGTCATg < 4:349851/134‑1 (MQ=255) ttcCGCGTTGTACTTTCGGTAACCGACTTAGGTAAGAGCAGTATTGATGATACTGCCGGTTGTAATTCTCACCCAGAGTAATGACGGATCGGCATGATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTg < 7:221497/137‑1 (MQ=255) ttcCGCCTTGTACTTTCTGTAACCGACATAGGTAAGAGCAGTAATGATGATACTGCCGTTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTg < 3:153208/137‑1 (MQ=255) cggccttGTACTTGCTGTAACCGACATAGGTAAGAGCAGTAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTgaa < 3:131981/133‑1 (MQ=255) ccGCCTTGTACTTTCTTAAACCGAAATTGGTTAGAGCAGTAATGTTGATACTGCCGGTTTTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTgaa < 3:297912/138‑1 (MQ=255) ccGCCTTGTACTTTCTGTAACCGACATAGGTAAGAGCAGTAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTgaa < 5:35846/138‑1 (MQ=255) aCTTTCTGAAACCGACATAGGTAAGAGCAGTAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGaaa < 5:385839/138‑1 (MQ=255) aCATAGGTAAGAGCAGTAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCttcg > 8:139183/1‑137 (MQ=255) gtaagagCAGTAATGATTATACTGCCGTTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGGCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGctct < 6:208171/136‑1 (MQ=255) gtaagagCAGTAAAGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGAAGGATCGGCATCATCCTCCTCCACCCTGTCAAACAAATTTTTCAGGTCATGCTGAATAAGGGAAAGCCGTACACGCATCGAGctc > 1:381281/4‑138 (MQ=255) agCAGTAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCGTCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGATGAAGGGAAAGCCGGTCAAGCTTCGTGCTCTCTGTc > 6:187002/1‑139 (MQ=255) agCAGTAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATg < 3:136329/99‑1 (MQ=255) agCAGTAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATg > 4:136329/1‑99 (MQ=255) tAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTg > 6:187498/1‑139 (MQ=255) tAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTg > 5:310221/1‑139 (MQ=255) tAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTg > 8:186169/1‑139 (MQ=255) tAATGATGATACTGCCGCTTGTAATCATCACACAGAGTAAAGACGGAACGGCATCATCCTCATCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTACGTGCTCTCTGTCAttt > 3:158570/1‑138 (MQ=255) gatgatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTg > 5:232807/1‑138 (MQ=255) gatgatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCACCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGTAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTg > 1:410595/1‑138 (MQ=255) gatgatACTGCCGGTTGTAATGATCACCAAGAGTAAAGACGGATCGGCATCATCCTCCTGCACCCTGTCAAACACATTTTTCATGTCATGCTGAAGAAGGGAAAGCCGTTCAAACTTCGTGCTCTCTGTCAtaggatc > 7:168211/1‑132 (MQ=255) atgatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGa > 8:178507/1‑138 (MQ=255) atgatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGa > 3:83045/1‑138 (MQ=255) atgatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCATCCTCCACCATGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGATCAAGCTTCGTGCTCTCTGTCATTTGCTGa > 7:75020/1‑138 (MQ=255) gatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGct > 6:397683/1‑120 (MQ=255) gatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGct < 5:397683/120‑1 (MQ=255) atACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAAtt > 5:174281/1‑139 (MQ=255) atACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAAtt > 4:442280/1‑139 (MQ=255) aCTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGTAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTcc > 7:316164/1‑139 (MQ=255) tGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCctc > 4:267068/1‑139 (MQ=255) ccGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCCTGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCctct < 4:105017/138‑1 (MQ=255) ccGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGGTGAACTTCCTCtt > 8:224549/1‑139 (MQ=255) ccGGGTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTACAACCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCctc < 5:303360/137‑1 (MQ=255) cGGTTTTAATGATCACCCAGTTTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAATGACATTTTTCAGGTCATGCTGAAGAAGGGAATGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg < 4:158570/139‑1 (MQ=255) cGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg < 8:369165/139‑1 (MQ=255) cGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg < 2:156919/139‑1 (MQ=255) cGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg < 2:281487/139‑1 (MQ=255) taatgatCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAt < 7:250836/137‑1 (MQ=255) taatgatCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAt < 7:186169/137‑1 (MQ=255) atgttCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 6:134990/139‑3 (MQ=255) atgatCACCCAGAGTAACGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 5:327739/139‑3 (MQ=255) atgatCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 3:91417/139‑3 (MQ=255) atgatCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 6:321274/139‑3 (MQ=255) atgatCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 7:139183/139‑3 (MQ=255) tgatCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa > 4:307776/1‑136 (MQ=255) cACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATc > 1:359642/1‑138 (MQ=255) agagTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATg < 5:73420/139‑1 (MQ=255) aaGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCGCTGTCATTTGCTGAAATTCCTCTTGCTGAATAACATATATATGTTTTcg > 3:228714/1‑138 (MQ=255) aGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTcc > 6:17428/1‑138 (MQ=255) gACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa < 5:303356/139‑1 (MQ=255) gACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa < 5:333539/139‑1 (MQ=255) gACGGATCGGCATCATCCTCCTCCACCCTGTCAAAAACATTTTTCAGATCATGCTGAAGAAGAGAAAGCCGTTCAAGCTTTGTGCTCTCAGTCATTTGCTGAAATTCCTCTTGCTCAATGa > 7:95051/1‑121 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAg < 2:144296/64‑1 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGctct > 5:253858/1‑84 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGctct < 6:253858/84‑1 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCGTCTTGCTCAATAACATCTATATGTTTTCCGACTGt > 7:200880/1‑139 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg > 3:434672/1‑109 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg < 4:434672/109‑1 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg > 3:11452/1‑109 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa > 1:144062/1‑135 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa < 8:393534/135‑1 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa < 8:85095/135‑1 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa > 7:393534/1‑135 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa > 7:85095/1‑135 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa < 2:144062/135‑1 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGt > 8:219971/1‑139 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGt > 7:27614/1‑139 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGt > 3:446597/1‑139 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGt > 4:335294/1‑139 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCGGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGt > 5:96345/1‑139 (MQ=255) gATCGGCATCAACCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAg > 1:144296/1‑64 (MQ=255) tCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 5:211495/115‑3 (MQ=255) atcCTCCTCCACCCTGTCAAACACATTTATCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTg < 2:410595/138‑1 (MQ=255) tcctcctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGAt > 7:229699/1‑139 (MQ=255) ctcctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 6:251189/138‑1 (MQ=255) ctcctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 4:381844/138‑1 (MQ=255) ctcctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 7:178507/138‑1 (MQ=255) ctcctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 6:310221/138‑1 (MQ=255) ctcctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 3:442280/138‑1 (MQ=255) ctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAta > 1:344940/1‑99 (MQ=255) ctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAta < 2:344940/100‑2 (MQ=255) ctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGCCTGTTTCAAGCTGATCctct > 6:299072/1‑139 (MQ=255) ctagccccTGTCAAACACATTTTTCATGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGGGCTCTCTGTCATTTGCTGAAAATACTCTTGCTCAATAACATCTATATGTTTTCCGAATGTTTCAAGCTGATCct < 8:168211/132‑1 (MQ=255) ccTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACa < 5:187498/139‑1 (MQ=255) tGTCAAACACATTTTTCAGGTCATGCTGAAGCAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGCAATTCCTCTTGCTCACTGACATCTATAGGTTTTCCGACGGTTTCAAGCTGATCCTCTGATACATc > 6:94205/1‑139 (MQ=255) tGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGAt < 3:318748/126‑1 (MQ=255) tGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCAGACTGTTTCAAGCTGAt > 4:318748/1‑126 (MQ=255) tCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGa > 2:380266/1‑139 (MQ=255) tCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGa > 2:101506/1‑139 (MQ=255) tCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGa > 1:337953/1‑139 (MQ=255) caCATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCctct > 2:418427/2‑76 (MQ=255) caCATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCctct < 1:418427/75‑1 (MQ=255) aTTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 3:75722/117‑1 (MQ=255) aTTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc > 4:75722/1‑117 (MQ=255) tttttCAGGTCATTCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTGATTTGCTGAAATTCCTCTTGCTCATTAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGTTACATCGATTGTTAGAc < 3:403589/139‑1 (MQ=255) tttttCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGAc < 8:229699/139‑1 (MQ=255) ttttCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGa > 5:361437/1‑129 (MQ=255) ttttCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGa < 6:361437/129‑1 (MQ=255) | TTTTTCTCCGCTTTGTACTTTCTGTAGCCGACATAGGTCAGAGCTGTAATGATGATACTGCCGGTTGTGATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAAAACATTTTTCAGATCATGCTGAAGAAGAGAAAGCCGTTCAAGCTTTGTGCTCTCAGTCATTTGCTGAAATTCCTCTTGCTCAATGACGTCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGAC > CP006881/2179422‑2179686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |