| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,179,589 | T→C | T199T (ACA→ACG) | U712_10910 ← | Uncharacterized protein ypjB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,179,589 | 0 | T | C | 98.1% | 329.9 / ‑3.5 | 105 | T199T (ACA→ACG) | U712_10910 | Uncharacterized protein ypjB |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (55/48); total (56/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.57e-01 | |||||||||||
Only 100 of 105 total aligned reads displayed.
GTCAGAGCTGTAATGATGATACTGCCGGTTGTGATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAAAACATTTTTCAGATCATGCTGAAGAAGAGAAAGCCGTTCAAGCTTTGTGCTCTCAGTCATTTGCTGAAATTCCTCTTGCTCAATGACGTCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTAGGGTAAATCAAATCATATAAGCTGATAAATT > CP006881/2179458‑2179719 | gtaagagCAGTAATGATTATACTGCCGTTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGGCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGctct < 6:208171/136‑1 (MQ=255)gtaagagCAGTAAAGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGAAGGATCGGCATCATCCTCCTCCACCCTGTCAAACAAATTTTTCAGGTCATGCTGAATAAGGGAAAGCCGTACACGCATCGAGctc > 1:381281/4‑138 (MQ=255) agCAGTAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCGTCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGATGAAGGGAAAGCCGGTCAAGCTTCGTGCTCTCTGTc > 6:187002/1‑139 (MQ=255) tAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTg > 5:310221/1‑139 (MQ=255) tAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTg > 8:186169/1‑139 (MQ=255) tAATGATGATACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTg > 5:134990/1‑139 (MQ=255) tAATGATGATACTGCCGCTTGTAATCATCACACAGAGTAAAGACGGAACGGCATCATCCTCATCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTACGTGCTCTCTGTCAttt > 3:158570/1‑138 (MQ=255) gatgatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTg > 5:232807/1‑138 (MQ=255) gatgatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCACCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGTAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTg > 1:410595/1‑138 (MQ=255) gatgatACTGCCGGTTGTAATGATCACCAAGAGTAAAGACGGATCGGCATCATCCTCCTGCACCCTGTCAAACACATTTTTCATGTCATGCTGAAGAAGGGAAAGCCGTTCAAACTTCGTGCTCTCTGTCAtaggatc > 7:168211/1‑132 (MQ=255) atgatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGa > 3:83045/1‑138 (MQ=255) atgatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGa > 8:178507/1‑138 (MQ=255) atgatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCATCCTCCACCATGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGATCAAGCTTCGTGCTCTCTGTCATTTGCTGa > 7:75020/1‑138 (MQ=255) gatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGct < 5:397683/120‑1 (MQ=255) gatACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGct > 6:397683/1‑120 (MQ=255) atACTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAAtt > 5:174281/1‑139 (MQ=255) aCTGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGTAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTcc > 7:316164/1‑139 (MQ=255) tGCCGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCctc > 4:267068/1‑139 (MQ=255) ccGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCCTGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCctct < 4:105017/138‑1 (MQ=255) ccGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGGTGAACTTCCTCtt > 8:224549/1‑139 (MQ=255) ccGGGTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTACAACCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCctc < 5:303360/137‑1 (MQ=255) cGGTTTTAATGATCACCCAGTTTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAATGACATTTTTCAGGTCATGCTGAAGAAGGGAATGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg < 4:158570/139‑1 (MQ=255) cGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg < 8:369165/139‑1 (MQ=255) cGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg < 2:281487/139‑1 (MQ=255) cGGTTGTAATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg < 2:156919/139‑1 (MQ=255) taatgatCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAt < 7:186169/137‑1 (MQ=255) atgttCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 6:134990/139‑3 (MQ=255) atgatCACCCAGAGTAACGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 5:327739/139‑3 (MQ=255) atgatCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 3:91417/139‑3 (MQ=255) atgatCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 6:321274/139‑3 (MQ=255) atgatCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 7:139183/139‑3 (MQ=255) tgatCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa > 4:307776/1‑136 (MQ=255) cACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATc > 1:359642/1‑138 (MQ=255) agagTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATg < 5:73420/139‑1 (MQ=255) aaGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCGCTGTCATTTGCTGAAATTCCTCTTGCTGAATAACATATATATGTTTTcg > 3:228714/1‑138 (MQ=255) aGACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTcc > 6:17428/1‑138 (MQ=255) gACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa < 5:303356/139‑1 (MQ=255) gACGGATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa < 5:333539/139‑1 (MQ=255) gACGGATCGGCATCATCCTCCTCCACCCTGTCAAAAACATTTTTCAGATCATGCTGAAGAAGAGAAAGCCGTTCAAGCTTTGTGCTCTCAGTCATTTGCTGAAATTCCTCTTGCTCAATGa > 7:95051/1‑121 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGctct > 5:253858/1‑84 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGctct < 6:253858/84‑1 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCGTCTTGCTCAATAACATCTATATGTTTTCCGACTGt > 7:200880/1‑139 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg < 4:434672/109‑1 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg > 3:11452/1‑109 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg > 3:434672/1‑109 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTg < 4:11452/109‑1 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa > 7:85095/1‑135 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa > 7:393534/1‑135 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa < 8:393534/135‑1 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa > 1:144062/1‑135 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa < 8:85095/135‑1 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGa < 2:144062/135‑1 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGt > 7:27614/1‑139 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGt > 4:335294/1‑139 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGt > 8:219971/1‑139 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGt > 3:446597/1‑139 (MQ=255) gATCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCGGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGt > 5:96345/1‑139 (MQ=255) tCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 5:211495/115‑3 (MQ=255) tCGGCATCATCCTCCTCCACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa > 6:211495/1‑113 (MQ=255) atcCTCCTCCACCCTGTCAAACACATTTATCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTg < 2:410595/138‑1 (MQ=255) tcctcctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGAt > 7:229699/1‑139 (MQ=255) ctcctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 4:381844/138‑1 (MQ=255) ctcctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 7:178507/138‑1 (MQ=255) ctcctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 6:251189/138‑1 (MQ=255) ctcctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 3:442280/138‑1 (MQ=255) ctcctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 6:310221/138‑1 (MQ=255) ctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAta < 2:344940/100‑2 (MQ=255) ctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAta > 1:344940/1‑99 (MQ=255) ctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGCCTGTTTCAAGCTGATCctct > 6:299072/1‑139 (MQ=255) ctccACCCTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCctct > 2:276380/1‑139 (MQ=255) ctagccccTGTCAAACACATTTTTCATGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGGGCTCTCTGTCATTTGCTGAAAATACTCTTGCTCAATAACATCTATATGTTTTCCGAATGTTTCAAGCTGATCct < 8:168211/132‑1 (MQ=255) ccTGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACa < 5:187498/139‑1 (MQ=255) tGTCAAACACATTTTTCAGGTCATGCTGAAGCAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGCAATTCCTCTTGCTCACTGACATCTATAGGTTTTCCGACGGTTTCAAGCTGATCCTCTGATACATc > 6:94205/1‑139 (MQ=255) tGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGAt < 3:318748/126‑1 (MQ=255) tGTCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCAGACTGTTTCAAGCTGAt > 4:318748/1‑126 (MQ=255) tCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGCCTGTTTCAAGCTGATCCTCTGATACATCGa > 8:117020/1‑139 (MQ=255) tCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGa > 2:380266/1‑139 (MQ=255) tCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGa > 1:337953/1‑139 (MQ=255) tCAAACACATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGa > 2:101506/1‑139 (MQ=255) caCATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCctct > 2:418427/2‑76 (MQ=255) caCATTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCctct < 1:418427/75‑1 (MQ=255) aTTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc > 4:75722/1‑117 (MQ=255) aTTTTTCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 3:75722/117‑1 (MQ=255) tttttCAGGTCATTCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTGATTTGCTGAAATTCCTCTTGCTCATTAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGTTACATCGATTGTTAGAc < 3:403589/139‑1 (MQ=255) tttttCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGAc < 8:229699/139‑1 (MQ=255) ttttCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGa > 5:361437/1‑129 (MQ=255) ttttCAGGTCATGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGa < 6:361437/129‑1 (MQ=255) aTGCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTaaat > 6:337699/1‑138 (MQ=255) gCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc < 7:237466/103‑1 (MQ=255) gCTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATc > 8:237466/1‑103 (MQ=255) cTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTaaatcaa < 2:359642/138‑1 (MQ=255) cTGAAGAAGGGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTaaatcaa < 3:335294/138‑1 (MQ=255) gaaggGAAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCata > 7:28200/1‑139 (MQ=255) ggaAAGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATaaa < 8:33672/138‑2 (MQ=255) aGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa > 6:385661/1‑53 (MQ=255) aGCCGTTCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 5:385661/55‑3 (MQ=255) ttaaaGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACAACGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAat > 8:414258/4‑139 (MQ=255) ttCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa > 3:385038/1‑48 (MQ=255) ttCAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAAtaa < 4:385038/50‑3 (MQ=255) cAAGCTTCGTGCTCTCTGTCATTTGCTGAAATTCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAatt < 7:219971/138‑1 (MQ=255) | GTCAGAGCTGTAATGATGATACTGCCGGTTGTGATGATCACCCAGAGTAAAGACGGATCGGCATCATCCTCCTCCACCCTGTCAAAAACATTTTTCAGATCATGCTGAAGAAGAGAAAGCCGTTCAAGCTTTGTGCTCTCAGTCATTTGCTGAAATTCCTCTTGCTCAATGACGTCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTAGGGTAAATCAAATCATATAAGCTGATAAATT > CP006881/2179458‑2179719 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |