| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,172,226 | T→C | A100A (GCA→GCG) | U712_10860 ← | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,172,226 | 0 | T | C | 98.9% | 283.2 / ‑4.7 | 90 | A100A (GCA→GCG) | U712_10860 | 3‑methyl‑2‑oxobutanoate hydroxymethyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (33/55); total (34/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.37e-01 | |||||||||||
ACTGCGGTGTCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAACTGCTGCATTTTTCAGCGTATCCTCCTTGGACAGGTGATAAGACATAAACGGCATGTCTGTCACAATAAAAGTATTCTGCGCGCCCCTTTTAACAGCTTTTGTATGATGGATCATGTCCGCAACTGT > CP006881/2172099‑2172351 | acggCGGTGGCAAACCTAAGTGACTGACTACTGGAATGCCTCCAACCGGCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCAttt < 2:430515/134‑1 (MQ=255) gtgtCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAATGATAGCCGCTGCATTTTTCAGCg > 4:409621/1‑138 (MQ=255) gtgtCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCGGCATTTTTCAGCg > 3:17057/1‑138 (MQ=255) gtCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCACGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 5:228531/139‑1 (MQ=255) gtCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 3:202979/139‑1 (MQ=255) gtCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 8:381917/139‑1 (MQ=255) gtCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGAGTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 8:283354/139‑1 (MQ=255) gtCAAACCTAAGTGACTGACTACTGGAAGGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCGTCTCCGCCCTCAAGCTTCAGTGAGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 4:285883/139‑1 (MQ=255) ggcAAACCTAAGTGAATGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 2:221575/137‑1 (MQ=255) tCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 3:68939/138‑1 (MQ=255) tCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 5:152603/138‑1 (MQ=255) tCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 7:309924/138‑1 (MQ=255) tCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 2:262093/138‑1 (MQ=255) tCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 5:45378/138‑1 (MQ=255) tCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 8:256610/138‑1 (MQ=255) tCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 8:305210/138‑1 (MQ=255) aaaCCTAAGTGACTGACTTCTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCAGCTTTCCTGAACGATAGCCTCTGCATTTTTCAGCGTAtctt < 5:290310/139‑3 (MQ=255) gTGACTGACTACTGGAATGCCTACAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 4:395785/128‑1 (MQ=255) gTGACTGACTACTGGAATGCCTACAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt > 3:395785/1‑128 (MQ=255) actgactACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAgg > 4:104008/1‑139 (MQ=255) actgactACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAg < 1:435829/138‑1 (MQ=255) tgactACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGt > 7:311782/1‑138 (MQ=255) actactGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGAt < 8:297431/139‑1 (MQ=255) actactGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGAt < 8:157870/139‑1 (MQ=255) actactGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGAt < 7:203989/139‑1 (MQ=255) actactGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGAt < 6:423511/139‑1 (MQ=255) actactGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGAt < 6:92858/139‑1 (MQ=255) actactGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCCTCCTTAGACAGGTGAt < 5:9788/139‑1 (MQ=255) actactGGAATGCCTCCAAGCGGCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGAt < 4:138783/139‑1 (MQ=255) aaggCCACCAAGCGTCAATGCGCGAATGTATTCAAACCCCCCTTCTCCGCCCTCACGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACTATCGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAACACATa < 4:17057/136‑1 (MQ=255) aaTGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATa < 3:404160/139‑1 (MQ=255) tGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCg < 1:228847/108‑1 (MQ=255) tGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCg > 2:228847/1‑108 (MQ=255) tGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATaca < 8:195321/139‑3 (MQ=255) tGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATaaa > 7:195321/1‑139 (MQ=255) tGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATaaa < 8:139194/139‑1 (MQ=255) ccTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 6:432535/109‑1 (MQ=255) ccTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt > 5:432535/1‑109 (MQ=255) ccTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGa < 3:57146/119‑1 (MQ=255) ccTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGa > 4:57146/1‑119 (MQ=255) ccTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACg > 2:110044/1‑139 (MQ=255) ccTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAACTGCTGCATTTTTCAGCGTATCCTCCTTGGCCAGGTGATAAGACATAAACg > 1:270325/1‑139 (MQ=255) ccTCAAAGCTTCCATGCGCTAATGTCTTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCGTTCCTGCACGCTAGCCGCTGCATTTTTCGGCGTCGCTTCCTTAGACAGGGGAGAAGACCTAAACg > 8:198812/1‑139 (MQ=255) cacgCGTCAATGCGCGAATGGATTCAACCACGCCTCCTCCGCCCTCAAGCTTCAGGGCGTCAGCTCCGCTTACCTGAACGATAGCCGCGGCATTTTTCAGCGTATCTTCCTTAGACAGGTCATAAGACATAAACGGc < 1:178758/134‑1 (MQ=255) aaGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCAta < 8:311782/139‑2 (MQ=255) aGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt < 7:148264/103‑1 (MQ=255) aGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTAt > 8:148264/1‑103 (MQ=255) aGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGa > 7:303940/1‑113 (MQ=255) aGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGa < 8:303940/113‑1 (MQ=255) tCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACa > 4:313396/1‑111 (MQ=255) tCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACa < 3:313396/111‑1 (MQ=255) tCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCAtatctgt < 1:110044/139‑1 (MQ=255) tCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCAtatctgt < 4:225639/139‑1 (MQ=255) cAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCGTTCCTGAACGATAGCCGCTGCATTTTTCAGAGTATCTTCCTTTGACAGGTGATAAGACATAAACGGCAtatatgt > 4:53643/1‑138 (MQ=255) cgcgAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACaa < 3:448413/138‑1 (MQ=255) cgAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGCACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGCCAGGTGATAAGACATAACCGGCATATCTGTCACAATa > 5:181797/1‑138 (MQ=255) tGGATTCAAACACGCCTTCTCCGGCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTATCAGCGAATCTTCCTTAGACAGGTGATAAGACATTATCGGCATATCTGTCAGAATAAAGGt > 7:149158/1‑139 (MQ=255) ttCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTc > 8:368801/1‑139 (MQ=255) acacGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGgcgc > 3:401696/1‑139 (MQ=255) cacGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTCGACAGGTGATAAGACATAAACGGCATATCTGTCACATTAAAGGTATTCGgcgca < 3:53643/139‑2 (MQ=255) cacGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGgcgca < 7:127998/139‑2 (MQ=255) cacGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGgcgca < 5:372872/139‑2 (MQ=255) gCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGgcgcac < 8:205909/137‑3 (MQ=255) gCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGgcgcac > 7:205909/1‑135 (MQ=255) tcCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATaa > 4:81741/1‑116 (MQ=255) tcCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATaa < 3:81741/116‑1 (MQ=255) cccTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGAt < 1:127374/82‑1 (MQ=255) cccTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGAt > 2:127374/1‑82 (MQ=255) cccTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAAcgg > 5:328960/1‑137 (MQ=255) cccTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAAcgg > 7:319107/1‑137 (MQ=255) cTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCt > 3:76920/1‑139 (MQ=255) aaGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCtttt < 6:171692/139‑1 (MQ=255) cAGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCTTTTGTatga > 3:204112/1‑139 (MQ=255) aGTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCTTTTGTatga < 3:104008/138‑1 (MQ=255) gTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCtttt < 2:38903/131‑1 (MQ=255) gTGCGTCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCtttt > 1:38903/1‑131 (MQ=255) ggcAGCTCCGCTTTCCTGAACGATAGCGGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCTTTTGTATGATGGATc < 3:66028/137‑1 (MQ=255) gTCAGCTCCGCTTTCCTGAATGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCTTTTGTATGATGGATc < 3:409621/139‑1 (MQ=255) tCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATaaa < 1:100934/74‑1 (MQ=255) tCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATaaa > 2:100934/1‑74 (MQ=255) tCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATa < 8:421639/93‑1 (MQ=255) tCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATa > 7:421639/1‑93 (MQ=255) tCAGCTCCGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCTTTTGTATGATGGATCa > 2:312644/1‑139 (MQ=255) ccGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACATGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCTTTTGTATGATGGATCATGTCCg > 2:142799/1‑139 (MQ=255) cGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCTTTTGTATGATGGATCATGTCCGc < 7:368801/139‑1 (MQ=255) cGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCTTTTGTATGATGGATCATGTCCGc < 8:319107/139‑1 (MQ=255) cGCTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCTTTTGTATGATGGATCATGTCCGc < 4:295495/139‑1 (MQ=255) cTTTCCTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCTTTTGTATGATGGATCATGTCCGCaa > 8:376015/1‑139 (MQ=255) cTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCTTTTGTATGATGGATCATGTCCGCAACTGt > 6:23278/1‑138 (MQ=255) cTGAACGATAGCCGCTGCATTTTTCAGCGTATCTTCCTTAGACAGGTGATAAGACATAAACGGCATATCTGTCACAATAAAGGTATTCGGCGCACCCCTTTTAACGGCTTTTGTATGATGGATCATGTCCGCAACTGt < 4:76920/138‑1 (MQ=255) | ACTGCGGTGTCAAACCTAAGTGACTGACTACTGGAATGCCTCCAAGCGTCAATGCGCGAATGGATTCAAACACGCCTTCTCCGCCCTCAAGCTTCAGTGCGTCAGCTCCGCTTTCCTGAACGATAACTGCTGCATTTTTCAGCGTATCCTCCTTGGACAGGTGATAAGACATAAACGGCATGTCTGTCACAATAAAAGTATTCTGCGCGCCCCTTTTAACAGCTTTTGTATGATGGATCATGTCCGCAACTGT > CP006881/2172099‑2172351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |