Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,179,749	T→C	E146G (GAA→GGA)	U712_10910 ←	Uncharacterized protein ypjB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,179,749	0	T	C	100.0%	320.0 / NA	97	E146G (GAA→GGA)	U712_10910	Uncharacterized protein ypjB
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (55/42);  total (55/42)

TTCCTCTTGCTCAATGACGTCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTAGGGTAAATCAAATCATATAAGCTGATAAATTCATTCCATTTTTCATGAAAGCTCGTACTTTCATTCTTTTGGACATCCTGCTTCAGTTCAGCAAAGGCTTCCATAATCGGTCTTTCCAGTGAGCCCCAAAGCGGATCAGATCGATTGTCAACTGCGTCCATCAGCATTCTGAACTGCGCGG  >  CP006881/2179613‑2179869                                                                                                                                         |                                                                                                                         ttCCTCTTGCTCAATAACATCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCa                                                                                                                        <  4:446597/139‑1 (MQ=255)               taacatCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATc                                                                                                          <  6:174281/134‑1 (MQ=255)                 acatCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATct                                                                                                         <  8:28200/135‑2 (MQ=255)                 acatCTATATGTTATCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATct                                                                                                         <  8:200880/135‑2 (MQ=255)                    tCTATATGTTTTCCGCCTGTTTCAAGCAGATCCTCTCATACATCGAATGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCAATTCTTTTGGACATctcgct                                                                                                     >  7:140833/1‑134 (MQ=255)                       atatGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCttca                                                                                                  >  6:247474/1‑139 (MQ=255)                             tttCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCttcagttcag                                                                                            >  8:137397/1‑139 (MQ=255)                              ttCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTATGGACATCTCGCttcagttcag                                                                                            >  5:309327/1‑138 (MQ=255)                               tCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCttcagttcagt                                                                                           >  5:433450/1‑137 (MQ=255)                               tCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCttcagttcagt                                                                                           >  6:127784/1‑137 (MQ=255)                               tCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCttcagttcagt                                                                                           >  4:113687/1‑137 (MQ=255)                               tCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCttcagttcagt                                                                                           >  8:315822/1‑137 (MQ=255)                               tCCGACTGTTTCAAGCT‑ATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGTACATCTCGCttcagttcagta                                                                                          >  4:251744/1‑136 (MQ=255)                                   aCTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCtt                                                                                                    <  1:385099/125‑1 (MQ=255)                                   aCTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCtt                                                                                                    >  2:385099/1‑125 (MQ=255)                                                 aTCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGt                                                                        >  6:255110/1‑139 (MQ=255)                                                 aTCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGt                                                                        >  4:344162/1‑139 (MQ=255)                                                 aTCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGt                                                                        >  5:40201/1‑139 (MQ=255)                                                 aTCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGt                                                                        >  1:84851/1‑139 (MQ=255)                                                 aTCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGt                                                                        >  1:34445/1‑139 (MQ=255)                                                 aTCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATATCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGt                                                                        >  3:386896/1‑139 (MQ=255)                                                 aTCCTCTGATACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCACTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGt                                                                        >  5:11441/1‑139 (MQ=255)                                                         aTACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAg                                                                >  7:239734/1‑139 (MQ=255)                                                          tACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                               <  5:247474/139‑1 (MQ=255)                                                          tACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                               <  6:40201/139‑1 (MQ=255)                                                          tACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTATGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                               <  6:309327/139‑1 (MQ=255)                                                              tCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATATATCAAGAAAGCTAGTGCTACCATTCTATTGGACATCTCGCTTCAGTACAGAAAAAGCTTCCATAATCGTTTTTTCCAGTGAGc                                                           >  3:270005/1‑139 (MQ=255)                                                               cGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGcc                                                          >  6:270455/1‑139 (MQ=255)                                                                gATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCACTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGccc                                                         <  6:11441/139‑1 (MQ=255)                                                                 aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATaa                                                                             <  7:240403/118‑1 (MQ=255)                                                                 aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATaa                                                                             >  8:240403/1‑118 (MQ=255)                                                                 aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                               <  5:300640/132‑1 (MQ=255)                                                                 aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                               >  6:300640/1‑132 (MQ=255)                                                                 aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGccc                                                         >  2:371256/1‑138 (MQ=255)                                                                 aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGccc                                                         >  3:96381/1‑138 (MQ=255)                                                                 aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGccc                                                         >  2:142404/1‑138 (MQ=255)                                                                 aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGAAAAAGCTTCCATAATCGGTTTTTCCAGTg                                                              <  7:418693/133‑1 (MQ=255)                                                                 aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGAAAAAGCTTCCATAATCGGTTTTTCCAGTg                                                              >  8:418693/1‑133 (MQ=255)                                                                   tGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCa                                                       >  3:128944/1‑138 (MQ=255)                                                                   tGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCa                                                       >  7:86971/1‑138 (MQ=255)                                                                     tAAGACTGGGGTAAATCAAGTCATATAATCTGATAAATTGATTGCATTTTTGATGAAAGCTTGTGCTTCGATTCTTTTGGACATCTCGCTTCAGTTGAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAg                                                    <  4:270005/139‑1 (MQ=255)                                                                     tAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCaaa                                                     <  1:142404/138‑1 (MQ=255)                                                                     tAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAg                                                    <  6:433450/139‑1 (MQ=255)                                                                           tggggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                               >  4:416510/3‑136 (MQ=255)                                                                            ggggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                               >  1:212008/2‑135 (MQ=255)                                                                            ggggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                               >  2:333958/2‑135 (MQ=255)                                                                            ggggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                               >  8:228183/2‑135 (MQ=255)                                                                             gggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATc                                                                           >  2:128699/1‑108 (MQ=255)                                                                             gggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATc                                                                           <  1:128699/108‑1 (MQ=255)                                                                             gggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                               >  8:62666/1‑134 (MQ=255)                                                                             gggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                               >  1:259802/1‑134 (MQ=255)                                                                             gggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAg                                            >  5:205336/1‑139 (MQ=255)                                                                               gTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGac                                          <  5:17428/139‑2 (MQ=255)                                                                                tAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGacc                                         <  7:224549/139‑3 (MQ=255)                                                                                  aatcaagtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGa                                       >  3:397853/1‑139 (MQ=255)                                                                                   atcaagtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGAt                                      >  2:100249/1‑139 (MQ=255)                                                                                       agtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCgg                                                                         >  1:58050/3‑100 (MQ=255)                                                                                       agtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCgg                                                                         <  2:58050/98‑1 (MQ=255)                                                                                       agtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGt                                   >  1:279158/3‑138 (MQ=255)                                                                                        gtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCttcagtt                                                                                               >  7:137325/2‑77 (MQ=255)                                                                                        gtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCttcagtt                                                                                               <  8:137325/76‑1 (MQ=255)                                                                                        gtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                               >  4:204646/2‑109 (MQ=255)                                                                                        gtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                               <  3:204646/108‑1 (MQ=255)                                                                                        gtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTAGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTACAGTGAG‑CCCAAAGCGGGTCAGACCGATTGTCaa                                >  3:445552/2‑139 (MQ=255)                                                                                            tataAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGGTGTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAAccg                             <  8:140833/139‑3 (MQ=255)                                                                                             ataAACTGATAAATTCATTCCATTTTTCATGAAAGATTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCTGTTTTTCCAGTGAGCCCCAAAGCGGTTCAGACCGATTGTCAAccg                             >  4:227994/1‑136 (MQ=255)                                                                                                aacTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATc                         <  7:228183/137‑1 (MQ=255)                                                                                                aacTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATc                         <  4:386896/137‑1 (MQ=255)                                                                                                     aTAAATTCCTTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                    <  4:83045/139‑1 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGccc                                                         >  1:220422/1‑102 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGccc                                                         <  2:220422/102‑1 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                               <  1:89332/112‑3 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                               >  2:89332/1‑110 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGCCCGATTGTCAACCGCATCCag                      >  1:300864/1‑136 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCAt                      >  3:120593/1‑137 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCAt                      <  1:333958/137‑1 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCAt                      >  1:57031/1‑137 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                    <  5:255110/139‑1 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                    <  2:84851/139‑1 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAG‑CCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                    <  4:445552/138‑1 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACAGCTCGCTTCAGTGCAGTAAAAGCTTCCATACTCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                    <  5:94205/139‑1 (MQ=255)                                                                                                     aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTAGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCAt                      >  1:55382/1‑137 (MQ=255)                                                                                                      tAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCTGACCGATTGTCAACCGCATCCTTCa                    <  7:62666/138‑1 (MQ=255)                                                                                                      tAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                    <  7:160178/138‑1 (MQ=255)                                                                                                      tAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                    <  2:212008/138‑1 (MQ=255)                                                                                                      tAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAg                   <  1:380266/139‑1 (MQ=255)                                                                                                             attcCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCt             >  4:299747/1‑138 (MQ=255)                                                                                                             attcCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTg            <  7:117020/139‑1 (MQ=255)                                                                                                               tcCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                    >  8:417346/1‑129 (MQ=255)                                                                                                               tcCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                    <  7:417346/129‑1 (MQ=255)                                                                                                               tcCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGaa          >  5:45655/1‑139 (MQ=255)                                                                                                               tcCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGaa          >  7:393750/1‑139 (MQ=255)                                                                                                                ccATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGaa          <  6:96345/138‑1 (MQ=255)                                                                                                                  aTTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTg       <  2:279158/139‑1 (MQ=255)                                                                                                                        cATGTAAGCTTGTTCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCgg  <  8:186680/138‑1 (MQ=255)                                                                                                                                   gtgcTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                    <  7:66807/106‑1 (MQ=255)                                                                                                                                   gtgcTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                    >  8:66807/4‑109 (MQ=255)                                                                                                                                         |                                                                                                                         TTCCTCTTGCTCAATGACGTCTATATGTTTTCCGACTGTTTCAAGCTGATCCTCTGATACATCGATTGTAAGACTAGGGTAAATCAAATCATATAAGCTGATAAATTCATTCCATTTTTCATGAAAGCTCGTACTTTCATTCTTTTGGACATCCTGCTTCAGTTCAGCAAAGGCTTCCATAATCGGTCTTTCCAGTGAGCCCCAAAGCGGATCAGATCGATTGTCAACTGCGTCCATCAGCATTCTGAACTGCGCGG  >  CP006881/2179613‑2179869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑