Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,179,800 C→T R129K (AGA→AAA)  U712_10910 ← Uncharacterized protein ypjB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,179,8000CT100.0% 340.5 / NA 107R129K (AGA→AAA) U712_10910Uncharacterized protein ypjB
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (44/63);  total (44/63)

Only 100 of 107 total aligned reads displayed.

ATACATCGATTGTAAGACTAGGGTAAATCAAATCATATAAGCTGATAAATTCATTCCATTTTTCATGAAAGCTCGTACTTTCATTCTTTTGGACATCCTGCTTCAGTTCAGCAAAGGCTTCCATAATCGGTCTTTCCAGTGAGCCCCAAAGCGGATCAGATCGATTGTCAACTGCGTCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGCTTTTGTGTATCTGATGTATCAGCCTGCTTTAAACTCCGTACCATATCATTA  >  CP006881/2179669‑2179931
                                                                                                                                   |                                                                                                                                   
aTACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAg                                                                                                                              >  7:239734/1‑139 (MQ=255)
 tACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                                                                                             <  6:40201/139‑1 (MQ=255)
 tACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                                                                                             <  5:247474/139‑1 (MQ=255)
 tACATCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTATGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                                                                                             <  6:309327/139‑1 (MQ=255)
     tCGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATATATCAAGAAAGCTAGTGCTACCATTCTATTGGACATCTCGCTTCAGTACAGAAAAAGCTTCCATAATCGTTTTTTCCAGTGAGc                                                                                                                         >  3:270005/1‑139 (MQ=255)
      cGATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGcc                                                                                                                        >  6:270455/1‑139 (MQ=255)
       gATTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCACTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGccc                                                                                                                       <  6:11441/139‑1 (MQ=255)
        aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                                                                                             <  5:300640/132‑1 (MQ=255)
        aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGccc                                                                                                                       >  2:142404/1‑138 (MQ=255)
        aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGccc                                                                                                                       >  2:371256/1‑138 (MQ=255)
        aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGccc                                                                                                                       >  3:96381/1‑138 (MQ=255)
        aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGAAAAAGCTTCCATAATCGGTTTTTCCAGTg                                                                                                                            <  7:418693/133‑1 (MQ=255)
        aTTGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGAAAAAGCTTCCATAATCGGTTTTTCCAGTg                                                                                                                            >  8:418693/1‑133 (MQ=255)
          tGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCa                                                                                                                     >  7:86971/1‑138 (MQ=255)
          tGTAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCa                                                                                                                     >  3:128944/1‑138 (MQ=255)
            tAAGACTGGGGTAAATCAAGTCATATAATCTGATAAATTGATTGCATTTTTGATGAAAGCTTGTGCTTCGATTCTTTTGGACATCTCGCTTCAGTTGAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAg                                                                                                                  <  4:270005/139‑1 (MQ=255)
            tAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCaaa                                                                                                                   <  1:142404/138‑1 (MQ=255)
            tAAGACTGGGGTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAg                                                                                                                  <  6:433450/139‑1 (MQ=255)
                  tggggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                                                                                             >  4:416510/3‑136 (MQ=255)
                   ggggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                                                                                             >  8:228183/2‑135 (MQ=255)
                   ggggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                                                                                             >  2:333958/2‑135 (MQ=255)
                   ggggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                                                                                             >  1:212008/2‑135 (MQ=255)
                    gggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                                                                                             >  8:62666/1‑134 (MQ=255)
                    gggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                                                                                             >  1:259802/1‑134 (MQ=255)
                    gggTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAg                                                                                                          >  5:205336/1‑139 (MQ=255)
                      gTAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGac                                                                                                        <  5:17428/139‑2 (MQ=255)
                       tAAATCAAGTCATATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGacc                                                                                                       <  7:224549/139‑3 (MQ=255)
                         aatcaagtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGa                                                                                                     >  3:397853/1‑139 (MQ=255)
                          atcaagtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGAt                                                                                                    >  2:100249/1‑139 (MQ=255)
                              agtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGt                                                                                                 >  1:279158/3‑138 (MQ=255)
                               gtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                                                                                             <  3:204646/108‑1 (MQ=255)
                               gtcaTATAAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGt                                                                                                                             >  4:204646/2‑109 (MQ=255)
                                   tataAACTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGGTGTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAAccg                                                                                           <  8:140833/139‑3 (MQ=255)
                                    ataAACTGATAAATTCATTCCATTTTTCATGAAAGATTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCTGTTTTTCCAGTGAGCCCCAAAGCGGTTCAGACCGATTGTCAAccg                                                                                           >  4:227994/1‑136 (MQ=255)
                                       aacTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATc                                                                                       <  4:386896/137‑1 (MQ=255)
                                       aacTGATAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATc                                                                                       <  7:228183/137‑1 (MQ=255)
                                            aTAAATTCCTTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                                                                                  <  4:83045/139‑1 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGccc                                                                                                                       <  2:220422/102‑1 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGccc                                                                                                                       >  1:220422/1‑102 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                                                                                             >  2:89332/1‑110 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCgggt                                                                                                             <  1:89332/112‑3 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGCCCGATTGTCAACCGCATCCag                                                                                    >  1:300864/1‑136 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCAt                                                                                    <  1:333958/137‑1 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCAt                                                                                    >  1:57031/1‑137 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCAt                                                                                    >  3:120593/1‑137 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                                                                                  <  5:255110/139‑1 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                                                                                  <  2:84851/139‑1 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAG‑CCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                                                                                  <  4:445552/138‑1 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACAGCTCGCTTCAGTGCAGTAAAAGCTTCCATACTCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                                                                                  <  5:94205/139‑1 (MQ=255)
                                            aTAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTAGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCAt                                                                                    >  1:55382/1‑137 (MQ=255)
                                             tAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCTGACCGATTGTCAACCGCATCCTTCa                                                                                  <  7:62666/138‑1 (MQ=255)
                                             tAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                                                                                  <  7:160178/138‑1 (MQ=255)
                                             tAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                                                                                  <  2:212008/138‑1 (MQ=255)
                                             tAAATTCATTCCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAg                                                                                 <  1:380266/139‑1 (MQ=255)
                                                    attcCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCt                                                                           >  4:299747/1‑138 (MQ=255)
                                                    attcCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTg                                                                          <  7:117020/139‑1 (MQ=255)
                                                      tcCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                                                                                  >  8:417346/1‑129 (MQ=255)
                                                      tcCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGaa                                                                        >  7:393750/1‑139 (MQ=255)
                                                      tcCATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGaa                                                                        >  5:45655/1‑139 (MQ=255)
                                                       ccATTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGaa                                                                        <  6:96345/138‑1 (MQ=255)
                                                         aTTTTTCATGAAAGCTTGTGCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTg                                                                     <  2:279158/139‑1 (MQ=255)
                                                               cATGTAAGCTTGTTCTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCgg                                                                <  8:186680/138‑1 (MQ=255)
                                                                          gtgcTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                                                                                  >  8:66807/4‑109 (MQ=255)
                                                                          gtgcTTCCATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCa                                                                                  <  7:66807/106‑1 (MQ=255)
                                                                                ccATTCTTTTGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTtgt                                               <  4:120593/137‑1 (MQ=255)
                                                                                  aTTCTTTTGGACAACTCGAGTCAGATCAGTAAAAGCTTCCATAATCGGGTTTTCCATGGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCAGCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTgtgtg                                            <  4:228714/139‑2 (MQ=255)
                                                                                        ttGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCt                                         <  2:251282/136‑1 (MQ=255)
                                                                                        ttGGACATCTCGCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTg                                        <  3:307776/137‑1 (MQ=255)
                                                                                                ctcgCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCa                                                                                     <  1:305632/81‑1 (MQ=255)
                                                                                                ctcgCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCa                                                                                     >  2:305632/4‑84 (MQ=255)
                                                                                                ctcgCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGc                              >  2:163923/4‑139 (MQ=255)
                                                                                                   gCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGc                              <  3:344162/136‑1 (MQ=255)
                                                                                                   gCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGc                              <  3:299747/136‑1 (MQ=255)
                                                                                                   gCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGc                              <  3:251744/136‑1 (MQ=255)
                                                                                                   gCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGc                              <  4:96381/136‑1 (MQ=255)
                                                                                                   gCTTCAGTTCAGTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGc                              <  8:239734/136‑1 (MQ=255)
                                                                                                        agttcagTAAAAGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTa                      <  1:100249/139‑1 (MQ=255)
                                                                                                               taaaaGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGctct                                                         >  5:17630/2‑97 (MQ=255)
                                                                                                               taaaaGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGctct                                                         <  6:17630/96‑1 (MQ=255)
                                                                                                               taaaaGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTcc                >  3:259374/2‑138 (MQ=255)
                                                                                                               taaaaGCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCg               <  4:397853/138‑1 (MQ=255)
                                                                                                                  aagCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAAc            <  7:315822/137‑1 (MQ=255)
                                                                                                                    gCTTCCATAATCGGTTTTTCCAGTGAGCCCCATAGCGGGTCAGACCGATTGTCAAGCGCATCCATCAGCATTCTGAACTGCGCGTCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCa          <  4:128944/139‑1 (MQ=255)
                                                                                                                    gCTTCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCa          >  2:308261/1‑139 (MQ=255)
                                                                                                                       tCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCatat       >  2:430312/1‑139 (MQ=255)
                                                                                                                       tCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCat         <  4:111352/137‑1 (MQ=255)
                                                                                                                       tCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCat         >  3:111352/1‑137 (MQ=255)
                                                                                                                       tCCATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTGTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCatat       <  5:187002/139‑1 (MQ=255)
                                                                                                                        ccATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCatat       <  5:270455/138‑1 (MQ=255)
                                                                                                                        ccATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCatat       <  7:137397/138‑1 (MQ=255)
                                                                                                                        ccATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCatat       <  6:45655/138‑1 (MQ=255)
                                                                                                                        ccATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCatat       <  1:276380/138‑1 (MQ=255)
                                                                                                                        ccATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTGTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCatat       <  8:393750/138‑1 (MQ=255)
                                                                                                                        ccATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGGTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCatat       <  3:416510/138‑1 (MQ=255)
                                                                                                                        ccATAATCGGTTTTTCCAGTGAGCACCAAAGCGTGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCatat       <  3:227994/138‑1 (MQ=255)
                                                                                                                         cATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGctt                            <  8:101962/116‑3 (MQ=255)
                                                                                                                         cATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGctt                            >  7:101962/1‑114 (MQ=255)
                                                                                                                         cATAATCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATAAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCa     >  6:184007/1‑139 (MQ=255)
                                                                                                                             aTCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATta  <  3:113687/138‑1 (MQ=255)
                                                                                                                             aTCGGTTTTTCCAGTGAGCCCCAAAGCGGGTCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATta  <  1:163923/138‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                   
ATACATCGATTGTAAGACTAGGGTAAATCAAATCATATAAGCTGATAAATTCATTCCATTTTTCATGAAAGCTCGTACTTTCATTCTTTTGGACATCCTGCTTCAGTTCAGCAAAGGCTTCCATAATCGGTCTTTCCAGTGAGCCCCAAAGCGGATCAGATCGATTGTCAACTGCGTCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGCTTTTGTGTATCTGATGTATCAGCCTGCTTTAAACTCCGTACCATATCATTA  >  CP006881/2179669‑2179931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑