Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 2,179,952 G→A I78I (ATC→ATT U712_10910 ← Uncharacterized protein ypjB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,179,9520GA98.6% 223.3 / NA 72I78I (ATC→ATTU712_10910Uncharacterized protein ypjB
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (37/34);  minor base C (1/0);  total (38/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ATCAGATCGATTGTCAACTGCGTCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGCTTTTGTGTATCTGATGTATCAGCCTGCTTTAAACTCCGTACCATATCATTATAGCCCAGTGTGATTTGACGGATTTGGGCTCCCGTTAGCATGGTGTCTTGCTTTTTTTTCTCGGCGGATTTTAATGTTTTTTCAAAATAAGCAAGGACTTGCAGCGCCTCTTCATATTTTGACTGGCGGGTCATTTGAAAGACCGTATCGGATA  >  CP006881/2179823‑2180085
                                                                                                                                 |                                                                                                                                     
gtCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCt                                                                                                                              <  2:55382/138‑1 (MQ=255)
gtCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCt                                                                                                                              >  2:238863/2‑139 (MQ=255)
gtCAGACCGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGAGATTTGACGAATTTGGGCt                                                                                                                              >  3:730/2‑139 (MQ=255)
    gaccGATTGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCg                                                                                                                          <  1:430312/136‑1 (MQ=255)
          ttGTCAACCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCa                                                                                                                    <  1:371256/139‑1 (MQ=255)
               aaCCGCATCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATgggg                                                                                                               >  1:236179/1‑137 (MQ=255)
                    catCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCGCGt                                                                                                                         <  3:196149/122‑1 (MQ=255)
                    catCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGt                                                                                                                         >  4:196149/3‑124 (MQ=255)
                     atCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGc                                                                                                         <  4:168307/138‑1 (MQ=255)
                     atCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGc                                                                                                         <  7:116599/138‑1 (MQ=255)
                                ttCTGAACTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTtct                                                                                               >  2:9673/1‑138 (MQ=255)
                                     aaCTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTtctcag                                                                                            <  2:236179/136‑3 (MQ=255)
                                     aaCTGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTcagc                                                                                           <  4:259374/137‑1 (MQ=255)
                                        tGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCGGTTTTTTGTCAGCGGCtt                                                                                      >  6:297602/1‑139 (MQ=255)
                                        tGCGCGGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTGGCTGTTTTTTCTCAGCGGAtt                                                                                      >  1:403778/1‑139 (MQ=255)
                                          cgcgGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGAtttt                                                                                    >  6:268382/1‑139 (MQ=255)
                                          cgcgGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCACAGGGGAtttt                                                                                    >  2:208294/1‑139 (MQ=255)
                                          cgcgGCTGCTCTGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATCGGGTCTTGCTGTGTTTTCTCAGAGGAttt                                                                                     >  5:53142/1‑138 (MQ=255)
                                                  ctctGAGTTTTTGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGttt                                                                             <  2:34445/138‑1 (MQ=255)
                                                       agtttttGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGCATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTGTTTTCTGAGCGGATTTTAATGTTTTTTcc                                                                        >  5:405256/4‑137 (MQ=255)
                                                            ttGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTcagcg                                                                                          <  6:124920/115‑1 (MQ=255)
                                                            ttGTGTGTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTcagcg                                                                                          >  5:124920/1‑115 (MQ=255)
                                                               tgtgTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATactcc                                                               <  6:428582/139‑5 (MQ=255)
                                                               tgtgTCTGATGTATCAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATactcc                                                               <  1:308261/139‑5 (MQ=255)
                                                                           atcatcTTGCTTTAAACTCCGAACCATATCATTATCGCCAAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTGGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAg                                                    <  2:259802/138‑1 (MQ=255)
                                                                             cAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAgcgc                                                 >  6:419772/1‑139 (MQ=255)
                                                                              aGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGcc                                                <  7:52651/139‑1 (MQ=255)
                                                                                 ttGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCctct                                             >  5:87875/2‑139 (MQ=255)
                                                                                    ctatAAACTACGAACCATAAAATTATAGCCCAATGTGATTTTACGAAATAGGGCTCCCGTTAGCATGGGGTCTAGGTGTTTTTTCTAAGCGGATTTTAATGTTTTTTAAAAATACTACAAGACATCAAGCGCCTCTTc                                           >  6:155073/4‑138 (MQ=255)
                                                                                    cTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTggg                                                                                                                                <  8:415683/53‑1 (MQ=255)
                                                                                    cTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTggg                                                                                                                                >  7:415683/1‑53 (MQ=255)
                                                                                    cTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGc                                                                                                         >  3:353814/1‑76 (MQ=255)
                                                                                    cTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGc                                                                                                         <  4:353814/76‑1 (MQ=255)
                                                                                         aaCTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATAttt                                     >  7:139053/1‑139 (MQ=255)
                                                                                         aaCTCCGAACCATATCATAAAAGCCCAATGTGATTTGACCAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATAttt                                     <  2:57031/139‑1 (MQ=255)
                                                                                                     tatCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGt                         >  4:341467/1‑139 (MQ=255)
                                                                                                      atCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGt                         >  2:388782/1‑138 (MQ=255)
                                                                                                       tCATTATAGCCCATTGGTATTTGACGATTTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTATCTGGGGTTTTTAATGTTTTTTCAAAATACTCCAATACTTCAAGCGCCTCTTCATATTTCGCCTGTCGGGTc                        <  4:20994/138‑1 (MQ=255)
                                                                                                          ttATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCgggggagtt                    >  1:218537/1‑133 (MQ=255)
                                                                                                            ataGCCCTATGTGTATTGCCTAATTGGGGCACCCTTTAGCTTGGGGTATTGCTGTTTTTTCTCAGCGTTTTTAAATGTTTTTTCAAAAAACTCCAAGACTTGCAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTg                   <  1:208294/138‑1 (MQ=255)
                                                                                                             tcgCCCAATGTTATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTAAAAAATACTCCACGACTTGACGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGa                  <  5:297602/136‑1 (MQ=255)
                                                                                                             taGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGaa                 <  8:320139/139‑1 (MQ=255)
                                                                                                               gCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGa                  >  6:147956/1‑136 (MQ=255)
                                                                                                                cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGc                                                                                                         <  6:248442/48‑1 (MQ=255)
                                                                                                                cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGc                                                                                                         >  5:248442/1‑48 (MQ=255)
                                                                                                                cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTc                        >  1:314215/1‑129 (MQ=255)
                                                                                                                cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGa              >  2:23871/1‑139 (MQ=255)
                                                                                                                cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTGTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGGCATTTGAAAGa              <  1:238863/139‑1 (MQ=255)
                                                                                                                cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCAGGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTc                        <  2:314215/129‑1 (MQ=255)
                                                                                                                cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCAGGGGGGCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGa              <  6:205336/139‑1 (MQ=255)
                                                                                                                 ccAATGTGATTTGCCGAATTTGGGCTCCCGTTAGCATGGGGTCTTGGTGTTTTTTCTCCGCGGTTTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGAc             <  5:268382/139‑1 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTcagc                                                                                           >  5:268320/1‑57 (MQ=37)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTcagc                                                                                           <  6:268320/57‑1 (MQ=37)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGt                         >  1:118570/1‑123 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGt                         <  2:118570/123‑1 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa         >  4:333028/1‑139 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa         >  4:5243/1‑139 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa         <  1:23871/139‑1 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa         >  7:332326/1‑139 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa         >  7:296635/1‑139 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa         >  6:373212/1‑139 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa         <  5:419772/139‑1 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATAATTCGCCTGTCTGGTCATTTGAAAGACTGTa         >  3:296199/1‑139 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTATCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAATGACTGTa         >  8:399326/1‑139 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTc                        >  3:79726/1‑123 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGAATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCtt                                            <  8:193254/104‑1 (MQ=255)
                                                                                                                     tgtgATTTGACGAATTTGGGCTCCCGTTAGAATGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTc                        <  4:79726/123‑1 (MQ=255)
                                                                                                                     tgtgATTTGAAGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGGAGCGCCTCtt                                            >  7:193254/1‑104 (MQ=255)
                                                                                                                     tgtgAATTTCCGAATTGGGGCACCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGTATTTTAATGTTTTTTCAAAATACTCCAAGACTTCAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa         <  4:730/139‑1 (MQ=255)
                                                                                                                          tttGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGa    >  1:56023/1‑139 (MQ=255)
                                                                                                                          tttGACGAATTTGGGCTCCCGTTAGAATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGCCTGTATCGGa    >  2:91155/1‑139 (MQ=255)
                                                                                                                             gACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATACTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATa  <  3:341467/138‑1 (MQ=255)
                                                                                                                                 |                                                                                                                                     
ATCAGATCGATTGTCAACTGCGTCCATCAGCATTCTGAACTGCGCGGCTGCTCTGAGCTTTTGTGTATCTGATGTATCAGCCTGCTTTAAACTCCGTACCATATCATTATAGCCCAGTGTGATTTGACGGATTTGGGCTCCCGTTAGCATGGTGTCTTGCTTTTTTTTCTCGGCGGATTTTAATGTTTTTTCAAAATAAGCAAGGACTTGCAGCGCCTCTTCATATTTTGACTGGCGGGTCATTTGAAAGACCGTATCGGATA  >  CP006881/2179823‑2180085

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: