| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,180,024 | A→C | L54M (CTT→TTG) | U712_10910 ← | Uncharacterized protein ypjB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,180,024 | 0 | A | C | 98.7% | 232.5 / NA | 74 | L54M (CTT→TTG) | U712_10910 | Uncharacterized protein ypjB |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base C (42/31); total (42/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATCAGCCTGCTTTAAACTCCGTACCATATCATTATAGCCCAGTGTGATTTGACGGATTTGGGCTCCCGTTAGCATGGTGTCTTGCTTTTTTTTCTCGGCGGATTTTAATGTTTTTTCAAAATA‑AGCAAGGACTTGCAGCGCCTCTTCATATTTTGACTGGCGGGTCATTTGAAAGACCGTATCGGATAAATCGTTCAACTCTTCGAGACTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAAT > CP006881/2179898‑2180146 | atcatcTTGCTTTAAACTCCGAACCATATCATTATCGCCAAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTGGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAg < 2:259802/138‑1 (MQ=255) cAGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAgcgc > 6:419772/1‑139 (MQ=255) aGCTTGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGcc < 7:52651/139‑1 (MQ=255) ttGCTTTAAACTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCctct > 5:87875/2‑139 (MQ=255) ctatAAACTACGAACCATAAAATTATAGCCCAATGTGATTTTACGAAATAGGGCTCCCGTTAGCATGGGGTCTAGGTGTTTTTTCTAAGCGGATTTTAATGTTTTTTAAAAATA‑CTACAAGACATCAAGCGCCTCTTc > 6:155073/4‑138 (MQ=255) aaCTCCGAACCATATCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATAttt > 7:139053/1‑139 (MQ=255) aaCTCCGAACCATATCATAAAAGCCCAATGTGATTTGACCAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATAttt < 2:57031/139‑1 (MQ=255) tatCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGt > 4:341467/1‑139 (MQ=255) atCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGt > 2:388782/1‑138 (MQ=255) tCATTATAGCCCATTGGTATTTGACGATTTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTATCTGGGGTTTTTAATGTTTTTTCAAAATA‑CTCCAATACTTCAAGCGCCTCTTCATATTTCGCCTGTCGGGTc < 4:20994/138‑1 (MQ=255) ttATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCgggggagtt > 1:218537/1‑133 (MQ=255) ataGCCCTATGTGTATTGCCTAATTGGGGCACCCTTTAGCTTGGGGTATTGCTGTTTTTTCTCAGCGTTTTTAAATGTTTTTTCAAAAAA‑CTCCAAGACTTGCAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTg < 1:208294/138‑1 (MQ=255) tcgCCCAATGTTATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTAAAAAATA‑CTCCACGACTTGACGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGa < 5:297602/136‑1 (MQ=255) taGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGaa < 8:320139/139‑1 (MQ=255) gCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGa > 6:147956/1‑136 (MQ=255) cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTc > 1:314215/1‑129 (MQ=255) cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGa > 2:23871/1‑139 (MQ=255) cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTGTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGGCATTTGAAAGa < 1:238863/139‑1 (MQ=255) cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCAGGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTc < 2:314215/129‑1 (MQ=255) cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCAGGGGGGCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGa < 6:205336/139‑1 (MQ=255) ccAATGTGATTTGCCGAATTTGGGCTCCCGTTAGCATGGGGTCTTGGTGTTTTTTCTCCGCGGTTTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGAc < 5:268382/139‑1 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGt < 2:118570/123‑1 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGt > 1:118570/1‑123 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa > 4:5243/1‑139 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa > 4:333028/1‑139 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa < 1:23871/139‑1 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa < 5:419772/139‑1 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa > 6:373212/1‑139 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa > 7:332326/1‑139 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa > 7:296635/1‑139 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATAATTCGCCTGTCTGGTCATTTGAAAGACTGTa > 3:296199/1‑139 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTATCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAATGACTGTa > 8:399326/1‑139 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGG‑GTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTc > 3:79726/1‑123 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGAATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCtt < 8:193254/104‑1 (MQ=255) tgtgATTTGACGAATTTGGGCTCCCGTTAGAATGG‑GTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTc < 4:79726/123‑1 (MQ=255) tgtgATTTGAAGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGGAGCGCCTCtt > 7:193254/1‑104 (MQ=255) tgtgAATTTCCGAATTGGGGCACCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGTATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTCAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa < 4:730/139‑1 (MQ=255) tttGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGa > 1:56023/1‑139 (MQ=255) tttGACGAATTTGGGCTCCCGTTAGAATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGCCTGTATCGGa > 2:91155/1‑139 (MQ=255) gACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATa < 3:341467/138‑1 (MQ=255) cgaaTTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGcc > 2:4285/4‑90 (MQ=255) cgaaTTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGcc < 1:4285/87‑1 (MQ=255) gCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCaatt > 5:373826/1‑137 (MQ=255) ccGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGCCTGTATCGGATAAATCATTCAATTCCTc > 6:188328/1‑139 (MQ=255) gTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCga < 1:9673/139‑1 (MQ=255) cATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCa > 2:91493/1‑95 (MQ=255) cATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCa < 1:91493/95‑1 (MQ=255) cATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCtt < 3:333028/139‑1 (MQ=255) tGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTcc < 8:332326/139‑1 (MQ=255) ggggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTccc > 7:307041/4‑139 (MQ=255) ggggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTACTCGAGGCTTccc > 7:376905/4‑139 (MQ=255) ggggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTAGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTccc > 1:27015/4‑139 (MQ=255) gggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGAGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTcccc > 8:60401/3‑139 (MQ=255) ggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGa > 4:169548/2‑99 (MQ=255) ggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGa < 3:169548/98‑1 (MQ=255) ggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCg < 6:87875/138‑1 (MQ=255) ggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCg > 5:152376/2‑139 (MQ=255) ggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCAATTGAAAGACAGTATCGGATAAATCATTCAATTACTCCAGGCTTcccag > 4:233940/2‑137 (MQ=255) tGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTg > 3:56441/1‑139 (MQ=255) tGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTg > 8:186579/1‑139 (MQ=255) tGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTg > 1:243205/1‑139 (MQ=255) gCTGTTTTTTCTCTGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCTCCTCTTCATATTTCGCCTGTCGGGGCATTTGAAAGACTGTATCGGTTAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTg < 5:155073/138‑1 (MQ=255) gCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTg < 5:184007/138‑1 (MQ=255) gCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGACATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTg > 7:188952/1‑138 (MQ=255) ttttCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGTTCATTTGAAAGACTTTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCtt > 3:250469/1‑139 (MQ=255) tctcAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTgg < 6:373826/138‑1 (MQ=255) tgATTTTAATTTTTTTTAAAAATACTCCAATTATTTAC‑GCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCa < 2:183350/138‑1 (MQ=255) ggATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCa < 7:186579/139‑1 (MQ=255) tAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATtata < 6:152376/138‑1 (MQ=255) tGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATaaaa > 3:333456/1‑138 (MQ=255) tttttCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAAt > 2:183740/1‑138 (MQ=255) tttttCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAAt > 7:114113/1‑138 (MQ=255) ttttCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGc < 7:159772/113‑1 (MQ=255) ttttCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGc > 8:159772/1‑113 (MQ=255) | ATCAGCCTGCTTTAAACTCCGTACCATATCATTATAGCCCAGTGTGATTTGACGGATTTGGGCTCCCGTTAGCATGGTGTCTTGCTTTTTTTTCTCGGCGGATTTTAATGTTTTTTCAAAATA‑AGCAAGGACTTGCAGCGCCTCTTCATATTTTGACTGGCGGGTCATTTGAAAGACCGTATCGGATAAATCGTTCAACTCTTCGAGACTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAAT > CP006881/2179898‑2180146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |