Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,180,057	G→T	R43R (CGC→CGA)	U712_10910 ←	Uncharacterized protein ypjB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,180,057	0	G	T	100.0%	257.5 / NA	82	R43R (CGC→CGA)	U712_10910	Uncharacterized protein ypjB
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (44/38);  total (44/38)

TATCATTATAGCCCAGTGTGATTTGACGGATTTGGGCTCCCGTTAGCATGGTGTCTTGCTTTTTTTTCTCGGCGGATTTTAATGTTTTTTCAAAATA‑AGCAAGGACTTGCAGCGCCTCTTCATATTTTGACTGGCGGGTCATTTGAAAGACCGTATCGGATAAATCGTTCAACTCTTCGAGACTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGAGCAATCAACAAACAGATCGTCAGCTTTCGTTTCATGCAGGT  >  CP006881/2179924‑2180191                                                                                                                                       |                                                                                                                                       tatCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGt                                                                                                                                   >  4:341467/1‑139 (MQ=255)  atCATTATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGt                                                                                                                                   >  2:388782/1‑138 (MQ=255)   tCATTATAGCCCATTGGTATTTGACGATTTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTATCTGGGGTTTTTAATGTTTTTTCAAAATA‑CTCCAATACTTCAAGCGCCTCTTCATATTTCGCCTGTCGGGTc                                                                                                                                  <  4:20994/138‑1 (MQ=255)      ttATAGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCgggggagtt                                                                                                                              >  1:218537/1‑133 (MQ=255)        ataGCCCTATGTGTATTGCCTAATTGGGGCACCCTTTAGCTTGGGGTATTGCTGTTTTTTCTCAGCGTTTTTAAATGTTTTTTCAAAAAA‑CTCCAAGACTTGCAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTg                                                                                                                             <  1:208294/138‑1 (MQ=255)         tcgCCCAATGTTATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTAAAAAATA‑CTCCACGACTTGACGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGa                                                                                                                            <  5:297602/136‑1 (MQ=255)         taGCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGaa                                                                                                                           <  8:320139/139‑1 (MQ=255)           gCCCAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGa                                                                                                                            >  6:147956/1‑136 (MQ=255)            cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTc                                                                                                                                  >  1:314215/1‑129 (MQ=255)            cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGa                                                                                                                        >  2:23871/1‑139 (MQ=255)            cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTGTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGGCATTTGAAAGa                                                                                                                        <  1:238863/139‑1 (MQ=255)            cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCAGGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTc                                                                                                                                  <  2:314215/129‑1 (MQ=255)            cccAATGTGATTTGACGAATTTGGGCTCCCGTTAGCAGGGGGGCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGa                                                                                                                        <  6:205336/139‑1 (MQ=255)             ccAATGTGATTTGCCGAATTTGGGCTCCCGTTAGCATGGGGTCTTGGTGTTTTTTCTCCGCGGTTTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGAc                                                                                                                       <  5:268382/139‑1 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGt                                                                                                                                   >  1:118570/1‑123 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGt                                                                                                                                   <  2:118570/123‑1 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa                                                                                                                   >  7:332326/1‑139 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa                                                                                                                   >  4:333028/1‑139 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa                                                                                                                   >  4:5243/1‑139 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa                                                                                                                   <  1:23871/139‑1 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa                                                                                                                   >  7:296635/1‑139 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa                                                                                                                   >  6:373212/1‑139 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa                                                                                                                   <  5:419772/139‑1 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATAATTCGCCTGTCTGGTCATTTGAAAGACTGTa                                                                                                                   >  3:296199/1‑139 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTATCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAATGACTGTa                                                                                                                   >  8:399326/1‑139 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGCATGG‑GTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTc                                                                                                                                  >  3:79726/1‑123 (MQ=255)                 tgtgATTTGACGAATTTGGGCTCCCGTTAGAATGG‑GTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTc                                                                                                                                  <  4:79726/123‑1 (MQ=255)                 tgtgAATTTCCGAATTGGGGCACCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGTATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTCAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTa                                                                                                                   <  4:730/139‑1 (MQ=255)                      tttGACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGa                                                                                                              >  1:56023/1‑139 (MQ=255)                      tttGACGAATTTGGGCTCCCGTTAGAATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGCCTGTATCGGa                                                                                                              >  2:91155/1‑139 (MQ=255)                         gACGAATTTGGGCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATa                                                                                                            <  3:341467/138‑1 (MQ=255)                                    gCTCCCGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCaatt                                                                                                >  5:373826/1‑137 (MQ=255)                                        ccGTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGCCTGTATCGGATAAATCATTCAATTCCTc                                                                                            >  6:188328/1‑139 (MQ=255)                                          gTTAGCATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCga                                                                                          <  1:9673/139‑1 (MQ=255)                                               cATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCa                                                                                                                                 >  2:91493/1‑95 (MQ=255)                                               cATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCa                                                                                                                                 <  1:91493/95‑1 (MQ=255)                                               cATGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCtt                                                                                     <  3:333028/139‑1 (MQ=255)                                                 tGGGGTCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTcc                                                                                   <  8:332326/139‑1 (MQ=255)                                                  ggggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTccc                                                                                  >  7:307041/4‑139 (MQ=255)                                                  ggggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTACTCGAGGCTTccc                                                                                  >  7:376905/4‑139 (MQ=255)                                                  ggggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTAGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTccc                                                                                  >  1:27015/4‑139 (MQ=255)                                                   gggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGAGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTcccc                                                                                 >  8:60401/3‑139 (MQ=255)                                                    ggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGa                                                                                                                        <  3:169548/98‑1 (MQ=255)                                                    ggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGa                                                                                                                        >  4:169548/2‑99 (MQ=255)                                                    ggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCg                                                                                >  5:152376/2‑139 (MQ=255)                                                    ggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCg                                                                                <  6:87875/138‑1 (MQ=255)                                                    ggtCTTGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCAATTGAAAGACAGTATCGGATAAATCATTCAATTACTCCAGGCTTcccag                                                                                >  4:233940/2‑137 (MQ=255)                                                         tGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTg                                                                           >  3:56441/1‑139 (MQ=255)                                                         tGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTg                                                                           >  8:186579/1‑139 (MQ=255)                                                         tGCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTg                                                                           >  1:243205/1‑139 (MQ=255)                                                          gCTGTTTTTTCTCTGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCTCCTCTTCATATTTCGCCTGTCGGGGCATTTGAAAGACTGTATCGGTTAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTg                                                                           <  5:155073/138‑1 (MQ=255)                                                          gCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTg                                                                           <  5:184007/138‑1 (MQ=255)                                                          gCTGTTTTTTCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGACATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTg                                                                           >  7:188952/1‑138 (MQ=255)                                                                ttttCTCAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGTTCATTTGAAAGACTTTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCtt                                                                    >  3:250469/1‑139 (MQ=255)                                                                   tctcAGCGGATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTgg                                                                  <  6:373826/138‑1 (MQ=255)                                                                          tgATTTTAATTTTTTTTAAAAATACTCCAATTATTTAC‑GCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCa                                                          <  2:183350/138‑1 (MQ=255)                                                                          ggATTTTAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCa                                                          <  7:186579/139‑1 (MQ=255)                                                                                tAATGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATtata                                                     <  6:152376/138‑1 (MQ=255)                                                                                   tGTTTTTTCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATaaaa                                                  >  3:333456/1‑138 (MQ=255)                                                                                      tttttCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAAt                                               >  2:183740/1‑138 (MQ=255)                                                                                      tttttCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAAt                                               >  7:114113/1‑138 (MQ=255)                                                                                       ttttCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGc                                                                       <  7:159772/113‑1 (MQ=255)                                                                                       ttttCAAAATA‑CTCCAAGACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGc                                                                       >  8:159772/1‑113 (MQ=255)                                                                                                       aagACTTGAAGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCAATCaacaaac                              <  2:56023/137‑1 (MQ=255)                                                                                                              gaaGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGc                                         >  1:64598/3‑121 (MQ=255)                                                                                                              gaaGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGc                                         <  2:64598/119‑1 (MQ=255)                                                                                                              gaaGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCaa                                       <  6:81959/121‑1 (MQ=255)                                                                                                              gaaGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCaa                                       >  5:81959/3‑123 (MQ=255)                                                                                                              gaaGCGCCTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCAATCAACAAACAGATCGt                       >  2:389512/3‑139 (MQ=255)                                                                                                                    ccgctTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGc                                         <  6:36536/112‑1 (MQ=255)                                                                                                                    ccTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGc                                         >  5:36536/1‑115 (MQ=255)                                                                                                                    ccTCTTCATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCAATCAACAAACAGATCGTCAGCtt                 >  8:356558/1‑139 (MQ=255)                                                                                                                          cATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCAATCAACAAACAGATCGTCAGCTTTCGtt            <  8:114113/138‑1 (MQ=255)                                                                                                                          cATATTTCGCCTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCAATCAACAAACAGATCGTCAGCTTTCGtt            <  3:5243/138‑1 (MQ=255)                                                                                                                               ttcgccTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCAATCAACAAACAGATCGTCAGCtt                 >  3:195144/6‑128 (MQ=255)                                                                                                                               ttcgccTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCAATCAACAAACAGATCGTCAGCtt                 <  4:195144/123‑1 (MQ=255)                                                                                                                               ttcgccTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTGTGCATTTCCATTATAAAAAATAAGTGCAATCCACATACAGATAGTCAGCTTGCGTTTCATg       >  8:163182/6‑138 (MQ=255)                                                                                                                                  gccTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCAATCAACAAACAGATCGTCAGCTTTCGTTTCATGCAgg   >  4:420777/3‑139 (MQ=255)                                                                                                                                   ccTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCAATCAACAAACAGATCGTCAGCTTTCGTTTCATGCAGGt  <  1:183740/138‑1 (MQ=255)                                                                                                                                   ccTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCAATCAACAAACAGATCGTCAGCTTTCGTTTCATGCAGGt  <  2:243205/138‑1 (MQ=255)                                                                                                                                   ccTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCAATCAACAAACAGATCGTCAGCTTTCGTTTCATGCAGGt  <  4:296199/138‑1 (MQ=255)                                                                                                                                   ccTGTCGGGTCATTTGAAAGACTGTATCGGATAAATCATTCAATTCCTCGAGGCTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGTGCAATCAACAAACAGATCGGCAGCTTTCGTTTCATGCAGGt  <  7:405656/138‑1 (MQ=255)                                                                                                                                       |                                                                                                                                       TATCATTATAGCCCAGTGTGATTTGACGGATTTGGGCTCCCGTTAGCATGGTGTCTTGCTTTTTTTTCTCGGCGGATTTTAATGTTTTTTCAAAATA‑AGCAAGGACTTGCAGCGCCTCTTCATATTTTGACTGGCGGGTCATTTGAAAGACCGTATCGGATAAATCGTTCAACTCTTCGAGACTTCCCCGCTCTGCAGCCTTGGCATTTCCATTATAAAAAATAAGAGCAATCAACAAACAGATCGTCAGCTTTCGTTTCATGCAGGT  >  CP006881/2179924‑2180191

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑