BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,180,272	T→C	T192T (ACA→ACG)	U712_10915 ←	Uncharacterized protein ypjA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,180,272	0	T	C	100.0%	352.0 / NA	107	T192T (ACA→ACG)	U712_10915	Uncharacterized protein ypjA
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (61/46); total (61/46)

Only 100 of 108 total aligned reads displayed.

TTATAAAAAATAAGAGCAATCAACAAACAGATCGTCAGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTTGTTTGCTTTTTCGAGACCACGAGAAAGTAAGCAAGCCCAATTGAAAAAATACTCAGCCAAAATGTTCCATACCCTATATCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATGTCAAACAAGTAAT  >  CP006881/2180136‑2180405

gagacaaaaaTAAGTGCAATCAACAAACAGATCGTCAGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCttcgt                                                                                                                                     <  7:414139/134‑1 (MQ=255)

                cAATCAACAAACAGATCGTCAGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGAc                                                                                                                      <  3:186366/138‑1 (MQ=255)

                cAATCAACAAACAGATCGTCAGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGAc                                                                                                                      <  2:167808/138‑1 (MQ=255)

                   tCAACAACCAGATCGTAAGCTTTCGTTTCATGCAGGTCCCTCCCACTATCTATCCTTAGAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCAca                                                                                                                  <  7:163182/139‑2 (MQ=255)

                    caacaaACAGATCGTCAGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCAcaa                                                                                                                 <  6:11616/139‑3 (MQ=255)

                        atacaGATCGTCATCTTTCGTTTCATGGAGGTCCCTCACACTCTCTCTCCTTACAGAATTTGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGaaa                                                                                                             <  2:377086/137‑1 (MQ=255)

                             gATCGTCAGCTTTCGTTTCATGCAGGTCCCTCCCACCCTCACTCCTTACAGAATATGAAGAAAGGGACAACGATAGACCAACATTGTCTTTACAACAGCACAAGCTTCGGTTGCTTTTTTGAGACCACAAGAAAATaag                                                                                                        >  3:440866/1‑139 (MQ=255)

                               tCGTCAGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGCCCAACATTGTCTTTAAATCAGCTCAAGCTTCGTTTGGTTTTTTGAGCCCACAAGAAAGTaagc                                                                                                       >  1:140898/1‑138 (MQ=255)

                               tCGTCAGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTaagc                                                                                                       >  6:197961/1‑138 (MQ=255)

                               tCGTCAGCTTTCGTTTCATGCAGGTCCCTCCCACACTATCTCCTTTCAGAATATAAAGAAAGTGACAACGATAGACCAACAATCTCTTTACATAAGCTCAAGATACGTTTGCTTTTTATAGACCACAAGAAAGTaagca                                                                                                      >  4:24775/1‑139 (MQ=255)

                                 gTCAGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGAc                                                                                                                      <  1:241084/121‑1 (MQ=255)

                                 gTCAGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTaagcaag                                                                                                    >  2:81664/1‑139 (MQ=255)

                                 gTCAGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTGTGCTTTTTTGAGAc                                                                                                                      >  2:241084/1‑121 (MQ=255)

                                    aGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCtttttt                                                                                                                           <  5:108395/113‑2 (MQ=255)

                                    aGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCtttttt                                                                                                                           >  6:108395/1‑112 (MQ=255)

                                                aTGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGATACCACAAGAAAGTAAGCAAGCGCGATTGtaaata                                                                                      >  6:251605/1‑136 (MQ=255)

                                                   cAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATa                                                                                    <  2:27015/137‑1 (MQ=255)

                                                   cAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACt                                                                                  <  7:42113/139‑1 (MQ=255)

                                                         cctcccACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCa                                                                            <  3:192124/139‑1 (MQ=255)

                                                           tcccACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCaa                                                                           >  2:362871/1‑138 (MQ=255)

                                                           tcccACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTATTTACATCAGCTCAAGATTCGTTTGCTTTTTTGAGACCACAAGAACGAAATCAAGCGCGATTGAAAATCTACTTAGACat                                                                           >  6:24385/1‑137 (MQ=255)

                                                            cccACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCaaa                                                                          >  4:237937/1‑138 (MQ=255)

                                                             ccACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCaaa                                                                          <  5:253477/137‑1 (MQ=255)

                                                                   tctctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACAAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGAAAGCGCGATTGAAAAGATACTTAGCCAAAAAGTTccc                                                                  >  8:343385/1‑138 (MQ=255)

                                                                    ctctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTccg                                                                  >  5:190923/1‑137 (MQ=255)

                                                                    ctctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTccg                                                                  >  3:204803/1‑137 (MQ=255)

                                                                    ctctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACAACAAGAAATTAAGAAAGAGCGATTTAAAAGAGACTTAGCCAAAATGttacg                                                                  >  5:184346/1‑135 (MQ=255)

                                                                     tctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTga                                                                                                                         >  7:372891/1‑82 (MQ=255)

                                                                     tctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTga                                                                                                                         <  8:372891/82‑1 (MQ=255)

                                                                     tctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTccg                                                                  <  7:356558/137‑2 (MQ=255)

                                                                     tctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTccg                                                                  <  1:81664/137‑2 (MQ=255)

                                                                     tctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTa                                                                >  2:293912/1‑139 (MQ=255)

                                                                     tctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTa                                                                >  2:118209/1‑139 (MQ=255)

                                                                     tctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTa                                                                >  1:18430/1‑139 (MQ=255)

                                                                       tcCTTACAGAATATGAAGAAAGGGAGAAGGATAGTCCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTa                                                                <  4:440866/137‑1 (MQ=255)

                                                                       tcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTatc                                                              >  6:417463/1‑137 (MQ=255)

                                                                       tcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTatc                                                              >  8:430459/1‑137 (MQ=255)

                                                                           tACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACt                                                                                  >  6:237432/1‑115 (MQ=255)

                                                                           tACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACt                                                                                  <  5:237432/115‑1 (MQ=255)

                                                                           tACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCtat                                                          >  8:252267/1‑139 (MQ=255)

                                                                           tACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCtat                                                          >  3:314345/1‑139 (MQ=255)

                                                                             cAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCtattt                                                        <  8:307041/139‑3 (MQ=255)

                                                                             cAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCtattt                                                        <  1:362871/139‑3 (MQ=255)

                                                                               gAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGAc                                                                                                                      >  5:441967/1‑75 (MQ=255)

                                                                               gAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGAc                                                                                                                      <  6:441967/75‑1 (MQ=255)

                                                                                  tatGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTcc                                                                   >  8:233225/1‑123 (MQ=255)

                                                                                  tatGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTcc                                                                   <  7:233225/123‑1 (MQ=255)

                                                                                   atGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACACGAAAATAATCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTc                                                   >  1:176808/1‑138 (MQ=255)

                                                                                   atGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTGCGTATCCTATTTCAGGCa                                                  >  2:149323/1‑139 (MQ=255)

                                                                                   atGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCGTTTTTGAGACCACAAGAAAGTAAGCCAGCGCGATTGAAAAGATACATAGCCAAAATGTTCCGTATCCTATTTCAGTCa                                                  >  7:340579/1‑139 (MQ=255)

                                                                                     gaagaaAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCata                                                >  3:16830/1‑139 (MQ=255)

                                                                                          aaGGGACAATGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATc                                           <  3:89089/139‑1 (MQ=255)

                                                                                            gggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAAt                                            >  7:289332/1‑136 (MQ=255)

                                                                                            gggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAAt                                            >  8:192745/1‑136 (MQ=255)

                                                                                             ggACAAGGATAGACCATCATTGTCTTTACATCAGCTGAAGCTTCGTTTGCTTTTTTGAGACCACAAGTAAGTAAGCAAGCGCTATTGAAAAGATTCTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATTATCAGa                                        <  1:154184/139‑1 (MQ=255)

                                                                                             ggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa                                        <  7:192745/139‑1 (MQ=255)

                                                                                             ggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa                                        <  2:18430/139‑1 (MQ=255)

                                                                                             ggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa                                        <  1:138099/139‑1 (MQ=255)

                                                                                             ggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa                                        <  5:251605/139‑1 (MQ=255)

                                                                                             ggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa                                        <  3:237937/139‑1 (MQ=255)

                                                                                              gACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTTCTTTTTTGAGCCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATAATTAGCCAAAATGTTCCGTATCCAATTTCAGTAATATAATCAGa                                        >  8:210329/1‑138 (MQ=255)

                                                                                               aCAGGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGaaa                                      <  1:142520/139‑1 (MQ=255)

                                                                                                  aGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCa                                   <  5:197961/139‑1 (MQ=255)

                                                                                                   ggATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGCTTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCa                                   >  5:285325/1‑138 (MQ=255)

                                                                                                       aGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATagag                              >  3:182110/1‑139 (MQ=255)

                                                                                                        gACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATagag                              >  7:11814/1‑138 (MQ=255)

                                                                                                         aCCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTTCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGAAACTTAGACAAAATGTTCCGTATCCTAATTCACTCAAATAATCAGAAAGCATAGAGTa                            >  7:37432/1‑139 (MQ=255)

                                                                                                            aaCATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTg                         <  4:314345/139‑1 (MQ=255)

                                                                                                            aaCATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTg                         <  2:433719/139‑1 (MQ=255)

                                                                                                             aCATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCa                                   >  6:157700/1‑128 (MQ=255)

                                                                                                             aCATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCa                                   <  5:157700/128‑1 (MQ=255)

                                                                                                              cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTTAGACCACAAGAAAGTAAGCAAGCGCGAATTAAAAAATACATAGCCAAAATGATCCGTATAAGAATAAAGTAATATAATCAGAAAGAATAGAGAATTGCg                       >  6:13428/1‑139 (MQ=255)

                                                                                                              cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGCTACTTAGCCAAAATGTTCCGGATCCGATTTCAGTCATATAATCAGCAAGCATAGAGTATTGCg                       >  6:71429/1‑139 (MQ=255)

                                                                                                              cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATc                                           >  7:264471/1‑119 (MQ=255)

                                                                                                              cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATc                                           <  8:264471/119‑1 (MQ=255)

                                                                                                              cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCg                       >  4:143547/1‑139 (MQ=255)

                                                                                                              cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCg                       >  8:101352/1‑139 (MQ=255)

                                                                                                              cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCg                       >  8:292259/1‑139 (MQ=255)

                                                                                                              cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCg                       >  6:30367/1‑139 (MQ=255)

                                                                                                              cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCAATTTAAGTCATATAATCATAAAGCATAGAGTAtctg                        >  2:142520/1‑135 (MQ=255)

                                                                                                                  gTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGca                    <  4:182110/138‑1 (MQ=255)

                                                                                                                   tCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcat                   >  7:309061/1‑138 (MQ=255)

                                                                                                                   tCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcat                   <  1:118209/138‑1 (MQ=255)

                                                                                                                   tCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTACGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcat                   >  7:311337/1‑138 (MQ=255)

                                                                                                                        aCATCATCTCAAGCTTCGTTTGCTTTTTTGAGACCACCAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTATCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcatcatat              <  6:184346/138‑3 (MQ=255)

                                                                                                                        aCATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAATAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcatcatat              >  6:429551/1‑136 (MQ=255)

                                                                                                                        aCATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCa                                   <  8:19085/117‑1 (MQ=255)

                                                                                                                        aCATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcatcatat              <  6:190923/138‑3 (MQ=255)

                                                                                                                        aCATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcatcatat              <  6:344263/138‑3 (MQ=255)

                                                                                                                             aGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATTCTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAAc         >  6:398520/1‑138 (MQ=255)

                                                                                                                             aGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATa                                 >  1:86588/1‑114 (MQ=255)

                                                                                                                             aGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATa                                 <  2:86588/114‑1 (MQ=255)

                                                                                                                             aGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcat                   <  3:262403/128‑1 (MQ=255)

                                                                                                                             aGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcat                   >  4:262403/1‑128 (MQ=255)

                                                                                                                             aGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAAc         >  8:424224/1‑138 (MQ=255)

                                                                                                                               cTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcatcat                <  4:81958/129‑1 (MQ=255)

                                                                                                                               cTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcatcat                >  3:81958/1‑129 (MQ=255)

                                                                                                                               cTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAg      >  1:283403/1‑139 (MQ=255)

                                                                                                                               cTCAAGCTTCGTTTGCTTTTTAGAGACCACAAGAAAGTAAGCCAGCGCGATTGAATAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAg      <  5:24385/139‑1 (MQ=255)

                                                                                                                                   aGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAATCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCATAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTagt  <  5:13428/139‑3 (MQ=255)

TTATAAAAAATAAGAGCAATCAACAAACAGATCGTCAGCTTTCGTTTCATGCAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTTGTTTGCTTTTTCGAGACCACGAGAAAGTAAGCAAGCCCAATTGAAAAAATACTCAGCCAAAATGTTCCATACCCTATATCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATGTCAAACAAGTAAT  >  CP006881/2180136‑2180405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`