| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP006881 | 2,180,320 | A→G | I176I (ATT→ATC) | U712_10915 ← | Uncharacterized protein ypjA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,180,320 | 0 | A | G | 98.5% | 422.3 / NA | 135 | I176I (ATT→ATC) | U712_10915 | Uncharacterized protein ypjA |
| Reads supporting (aligned to +/- strand): ref base A (1/0); major base G (64/68); minor base T (1/1); total (66/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 135 total aligned reads displayed.
CAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTTGTTTGCTTTTTCGAGACCACGAGAAAGTAAGCAAGCCCAATTGAAAAAATACTCAGCCAAAATGTTCCATACCCTATATCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATGTCAAACAAGTAATCAATGACATCGTTGTGCAGCGTCCACACTGCAGCAATTGC > CP006881/2180187‑2180445 | tcccACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCaa > 2:362871/1‑138 (MQ=255) tcccACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTATTTACATCAGCTCAAGATTCGTTTGCTTTTTTGAGACCACAAGAACGAAATCAAGCGCGATTGAAAATCTACTTAGACat > 6:24385/1‑137 (MQ=255) cccACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCaaa > 4:237937/1‑138 (MQ=255) ccACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCaaa < 5:253477/137‑1 (MQ=255) tctctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACAAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGAAAGCGCGATTGAAAAGATACTTAGCCAAAAAGTTccc > 8:343385/1‑138 (MQ=255) ctctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTccg > 3:204803/1‑137 (MQ=255) ctctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTccg > 5:190923/1‑137 (MQ=255) ctctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACAACAAGAAATTAAGAAAGAGCGATTTAAAAGAGACTTAGCCAAAATGttacg > 5:184346/1‑135 (MQ=255) tctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTccg < 7:356558/137‑2 (MQ=255) tctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTa > 2:293912/1‑139 (MQ=255) tctcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTa > 2:118209/1‑139 (MQ=255) tcCTTACAGAATATGAAGAAAGGGAGAAGGATAGTCCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTa < 4:440866/137‑1 (MQ=255) tcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTatc > 6:417463/1‑137 (MQ=255) tcCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTatc > 8:430459/1‑137 (MQ=255) cTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTAtcc > 3:115437/1‑138 (MQ=255) tACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACt > 6:237432/1‑115 (MQ=255) tACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCtat > 3:314345/1‑139 (MQ=255) aCAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCtat < 5:231815/138‑1 (MQ=255) cAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCtattt < 1:362871/139‑3 (MQ=255) cAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCtattt < 8:307041/139‑3 (MQ=255) tatGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTcc > 8:233225/1‑123 (MQ=255) tatGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTcc < 7:233225/123‑1 (MQ=255) atGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACACGAAAATAATCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTc > 1:176808/1‑138 (MQ=255) atGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTGCGTATCCTATTTCAGGCa > 2:149323/1‑139 (MQ=255) atGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCa > 2:138099/1‑139 (MQ=255) gaagaaAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCata > 3:16830/1‑139 (MQ=255) aaGGGACAATGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATc < 3:89089/139‑1 (MQ=255) ggACAAGGATAGACCATCATTGTCTTTACATCAGCTGAAGCTTCGTTTGCTTTTTTGAGACCACAAGTAAGTAAGCAAGCGCTATTGAAAAGATTCTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATTATCAGa < 1:154184/139‑1 (MQ=255) ggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa < 3:237937/139‑1 (MQ=255) ggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa < 4:204803/139‑1 (MQ=255) ggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa < 5:251605/139‑1 (MQ=255) ggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa < 2:18430/139‑1 (MQ=255) ggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa < 7:192745/139‑1 (MQ=255) ggACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa < 1:138099/139‑1 (MQ=255) gACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTTCTTTTTTGAGCCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATAATTAGCCAAAATGTTCCGTATCCAATTTCAGTAATATAATCAGa > 8:210329/1‑138 (MQ=255) aCAGGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGaaa < 1:142520/139‑1 (MQ=255) aGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCa < 5:197961/139‑1 (MQ=255) aGACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATagag > 3:182110/1‑139 (MQ=255) gACCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATagag > 7:11814/1‑138 (MQ=255) aCCAACATTGTCTTTACATCAGCTCAAGCTTCGTTTTCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGAAACTTAGACAAAATGTTCCGTATCCTAATTCACTCAAATAATCAGAAAGCATAGAGTa > 7:37432/1‑139 (MQ=255) aaCATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTg < 2:433719/139‑1 (MQ=255) aCATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCa > 6:157700/1‑128 (MQ=255) aCATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCa < 5:157700/128‑1 (MQ=255) cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGCTACTTAGCCAAAATGTTCCGGATCCGATTTCAGTCATATAATCAGCAAGCATAGAGTATTGCg > 6:71429/1‑139 (MQ=255) cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATc < 8:264471/119‑1 (MQ=255) cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATc > 7:264471/1‑119 (MQ=255) cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCg > 8:167357/1‑139 (MQ=255) cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCg > 8:292259/1‑139 (MQ=255) cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCg > 6:30367/1‑139 (MQ=255) cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCg > 4:143547/1‑139 (MQ=255) cATTGTCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCAATTTAAGTCATATAATCATAAAGCATAGAGTAtctg > 2:142520/1‑135 (MQ=255) tCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcat > 7:309061/1‑138 (MQ=255) tCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcat < 1:118209/138‑1 (MQ=255) tCTTTACATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTACGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcat > 7:311337/1‑138 (MQ=255) aCATCATCTCAAGCTTCGTTTGCTTTTTTGAGACCACCAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTATCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcatcatat < 6:184346/138‑3 (MQ=255) aCATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCa > 7:19085/1‑117 (MQ=255) aCATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCa < 8:19085/117‑1 (MQ=255) aCATCAGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcatcatat < 6:190923/138‑3 (MQ=255) aGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATTCTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAAc > 6:398520/1‑138 (MQ=255) aGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATa < 2:86588/114‑1 (MQ=255) aGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATa > 1:86588/1‑114 (MQ=255) aGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcat > 4:262403/1‑128 (MQ=255) aGCTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcat < 3:262403/128‑1 (MQ=255) cTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGcatcat < 4:81958/129‑1 (MQ=255) cTCAAGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAg > 1:283403/1‑139 (MQ=255) cTCAAGCTTCGTTTGCTTTTTAGAGACCACAAGAAAGTAAGCCAGCGCGATTGAATAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAg < 5:24385/139‑1 (MQ=255) aGCTTCGTTTGCTTTTTTGAGACCACAAGAAAGTAATCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCATAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTagt < 5:13428/139‑3 (MQ=255) cgtttgCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa < 1:203593/95‑1 (MQ=255) gtttgCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGa < 1:167248/95‑1 (MQ=255) gtttgCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAg > 6:118652/1‑129 (MQ=255) gtttgCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGa < 7:252267/139‑1 (MQ=255) gtttgCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGa < 4:115437/139‑1 (MQ=255) gtttgCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGa < 8:65862/139‑1 (MQ=255) gtttgCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGa < 4:16830/139‑1 (MQ=255) gtttgCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGa < 5:312618/139‑1 (MQ=255) gtttgCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGAATAATATCAAAAAAGTAGTCAATGa > 1:369618/1‑139 (MQ=255) tgCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACa < 7:101352/138‑1 (MQ=255) tgCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACa < 3:311849/138‑1 (MQ=255) tgCTTTTTTGAGACCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACa < 5:30367/138‑1 (MQ=255) gagaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGc < 7:343385/138‑1 (MQ=255) gagaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGc < 7:190309/138‑1 (MQ=255) gagaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGc < 7:430459/138‑1 (MQ=255) agcccACAAGAAAGTAAGCAAGCGCGCTTGAACAGATACTTAGCCAAACTGTTCCGTCTCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGGCAATGCCAGCGTTATGcc < 6:405256/135‑2 (MQ=255) agaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 7:424224/138‑1 (MQ=255) agaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 8:311337/138‑1 (MQ=255) agaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 8:11814/138‑1 (MQ=255) agaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 3:239078/138‑1 (MQ=255) gaacacaAGAAAGTAAGCAAGCGCGATTGAAAATATACTTAGCCAAAATGTTCCGGATCGTATTTCAGGCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAgt < 8:340579/136‑2 (MQ=255) gaCCACAAGAAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAgt < 2:176808/139‑2 (MQ=255) aagaAAGTAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTc > 6:108570/2‑136 (MQ=255) tAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGc > 1:348000/1‑123 (MQ=255) tAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGc < 2:348000/123‑1 (MQ=255) tAAGCAAGCGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTgcag > 2:88286/1‑139 (MQ=255) agcaagcGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTgcagc < 4:333456/138‑1 (MQ=255) agcaagcGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTgcagc > 5:394451/1‑138 (MQ=255) gcaagcTCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCa < 4:11395/121‑1 (MQ=255) gcaagcGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTc < 2:145168/126‑1 (MQ=255) gcaagcGCGATTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCaa > 7:59244/1‑139 (MQ=255) gcgcgaTTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCGGTGTCCAGACTGCAGCAATTg > 1:289971/6‑138 (MQ=255) cgaTTGAAAAGATACTTAGCCAAAATGTTCCGTATCCTATTTCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATATCAAACAAGTAGTCAATGACATCGTTATGCAGTGTCCAGACTGCAGCAATTGc > 8:194600/3‑136 (MQ=255) | CAGGTCCCTCCCACTCTCTCTCCTTACAGAATATGAAGAAAGGGACAAGGATAGACCAACATTGTCTTTACATCAGCTCAAGCTTTGTTTGCTTTTTCGAGACCACGAGAAAGTAAGCAAGCCCAATTGAAAAAATACTCAGCCAAAATGTTCCATACCCTATATCAGTCATATAATCAGAAAGCATAGAGTATTGCGGCATCATGTCAAACAAGTAATCAATGACATCGTTGTGCAGCGTCCACACTGCAGCAATTGC > CP006881/2180187‑2180445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |